Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28481 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-94 348.6 176 100.0
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-43 179.9 190 53.7
SHI07165 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-42 175.3 190 52.6
SHI19032 Sapria himalayana HOM05D001972 ORTHO05D002555 1.2e-41 173.7 190 52.1
SHI03363 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-41 173.3 190 52.1
SHI28427 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-41 171.4 190 52.1
SHI45012 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-35 151.0 131 61.8
SHI19157 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-34 147.5 174 50.0
TPR.G40229 Trifolium pratense HOM05D000002 ORTHO05D000001 8.1e-33 144.4 190 44.7
SHI35127 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-32 143.3 131 58.8
SHI45230 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-32 141.7 174 47.7
SHI38274 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-29 134.0 175 48.0
MSTRG.5281 Avicennia marina HOM05D000002 ORTHO05D000001 1.7e-22 110.2 131 42.0
SHI18478 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-21 106.7 113 50.4
SHI26299 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-21 105.1 110 50.9
SHI09392 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-20 102.8 117 49.6
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 4.6e-20 102.1 143 43.4
MSTRG.2296 Avicennia marina HOM05D000002 ORTHO05D000001 6.0e-20 101.7 131 38.9
SHI03311 Sapria himalayana HOM05D030947 ORTHO05D000001 1.3e-17 94.0 124 47.6
SHI20709 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-17 92.8 203 33.5
PSO541G3278 Papaver somniferum HOM05D000002 ORTHO05D000001 6.2e-17 91.7 172 32.6
SHI10319 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-16 90.5 124 45.2
SHI19084 Sapria himalayana HOM05D000002 ORTHO05D022936 1.4e-16 90.5 92 54.3
PSO339G0080 Papaver somniferum HOM05D000002 ORTHO05D000001 4.0e-16 89.0 126 42.1
THA.LOC104800056 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.3e-16 88.6 171 32.7
MSTRG.22736 Avicennia marina HOM05D000002 ORTHO05D000001 1.3e-14 84.0 110 40.9
SHI11980 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-14 83.6 102 46.1
Hma1.2p1_0279F.1_g112030 Hydrangea macrophylla HOM05D000006 ORTHO05D000001 2.9e-14 82.8 135 39.3
SHI04762 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-14 82.8 112 47.3
CAN.G785.12 Capsicum annuum HOM05D000002 ORTHO05D000001 3.8e-14 82.4 175 32.0
VMungo0464G0952 Vigna mungo HOM05D000002 ORTHO05D000001 4.9e-14 82.0 105 42.9
SHI22323 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-13 79.3 73 56.2
SHI26117 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-13 78.6 57 63.2
SHI19883 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-13 77.8 55 67.3
SHI43248 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-13 77.8 86 53.5
CSS0011358 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-12 77.4 127 38.6
RcHm_v2.0_Chr1g0329831 Rosa chinensis HOM05D000002 ORTHO05D000001 2.1e-12 76.6 193 28.5
SHI04707 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-12 75.9 73 53.4
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.0e-12 75.1 187 28.3
CSS0040389 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-11 73.9 115 40.0
SHI02997 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-11 73.6 139 39.6
SHI12496 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-11 73.6 77 50.6
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-11 72.8 187 29.4
Hma1.2p1_0160F.1_g071170 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-11 72.8 141 31.9
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-11 72.4 88 46.6
RhsimUnG0229000 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.7e-11 71.6 166 29.5
SHI02949 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-11 71.6 46 73.9
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-10 70.9 166 29.5
SHI15917 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-10 70.5 109 40.4
CSS0024331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-10 70.1 184 29.3
Sopen01g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-10 69.7 187 27.8
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-10 69.3 179 26.8
FvH4_6g07332 Fragaria vesca HOM05D000002 ORTHO05D000001 7.4e-10 68.2 151 30.5
FvH4_5g12471 Fragaria vesca HOM05D000002 ORTHO05D000001 9.6e-10 67.8 175 26.9
Gohir.A12G052250 Gossypium hirsutum HOM05D000002 ORTHO05D000001 9.6e-10 67.8 126 32.5
CSS0005727 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-09 67.4 179 26.3
TPR.G8649 Trifolium pratense HOM05D000002 ORTHO05D000001 1.6e-09 67.0 91 41.8
Nn1g06669 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.1e-09 66.6 185 27.0
RcHm_v2.0_Chr6g0259691 Rosa chinensis HOM05D000002 ORTHO05D000001 2.1e-09 66.6 117 34.2
THA.LOC104803123 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.1e-09 66.6 127 30.7
CSS0032896 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-09 66.2 177 27.7
HanXRQChr03g0090001 Helianthus annuus HOM05D000002 ORTHO05D000001 2.8e-09 66.2 212 25.5
Hma1.2p1_0544F.1_g175740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-09 66.2 86 41.9
COL.COLO4_03001 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.7e-09 65.9 144 31.9
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-09 65.5 173 28.3
SHI04724 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-09 65.5 73 49.3
EL10Ac2g03876 Beta vulgaris HOM05D000002 ORTHO05D000001 6.2e-09 65.1 219 24.7
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-09 65.1 173 27.7
CANSAT80G1830 Cannabis sativa HOM05D000002 ORTHO05D000001 6.2e-09 65.1 104 37.5
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.1e-09 64.7 190 27.9
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-09 64.7 164 29.9
Manes.15G176964 Manihot esculenta HOM05D000002 ORTHO05D000001 1.1e-08 64.3 105 38.1
SHI14852 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 64.3 94 42.6
Sopen11g023430 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-08 63.5 67 43.3
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-08 63.2 185 26.5
CSS0012713 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.8 119 31.1
CSS0014963 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.8 115 41.7
CSS0048213 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.8 94 39.4
CSS0019076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.3e-08 62.0 94 36.2
FvH4_3g06912 Fragaria vesca HOM05D000002 ORTHO05D000001 6.9e-08 61.6 78 42.3
Nn2g10460 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.9e-08 61.6 170 27.6
SHI23885 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-08 61.6 46 65.2
MSTRG.18601 Avicennia marina HOM05D000002 ORTHO05D000001 9.0e-08 61.2 83 36.1
Nn1g02756 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.0e-08 61.2 121 30.6
PSO478G0811 Papaver somniferum HOM05D000002 ORTHO05D000001 9.0e-08 61.2 118 33.1
SHI27648 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-08 61.2 48 58.3
CSS0045881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-07 60.5 94 35.1
AUR62037666 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.5e-07 60.5 120 30.8
CSS0033928 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-07 60.1 136 30.1
ECA236G4471 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-07 59.3 200 23.5
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-07 58.9 161 28.0
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.5e-07 58.9 183 28.4
CSS0035892 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-07 58.5 116 30.2
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-07 58.5 168 28.0
Ca_28064_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.8e-07 58.5 181 24.9
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 5.8e-07 58.5 169 26.0
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.8e-07 58.5 170 25.9
CSS0047943 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.6e-07 58.2 107 33.6
PSO455G0019 Papaver somniferum HOM05D000002 ORTHO05D000001 7.6e-07 58.2 64 42.2
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.9e-07 57.8 168 26.8
CSS0040701 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.9e-07 57.8 94 36.2
ECA240G1692 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.9e-07 57.8 182 27.5
ECA246G4098 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.9e-07 57.8 186 25.3
PSO210G7008 Papaver somniferum HOM05D000002 ORTHO05D000001 9.9e-07 57.8 62 41.9
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.9e-07 57.8 170 25.3
TAR156G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.9e-07 57.8 154 29.2
Ah.04g160170 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.3e-06 57.4 119 26.9
RcHm_v2.0_Chr5g0064041 Rosa chinensis HOM05D000002 ORTHO05D000001 1.3e-06 57.4 129 29.5
Ca_27230_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.7e-06 57.0 185 23.8
ECA233G2445 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 57.0 117 26.5
ECA236G0844 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 57.0 192 26.0
FvH4_7g29024 Fragaria vesca HOM05D000002 ORTHO05D000001 1.7e-06 57.0 112 31.2
Hma1.2p1_0764F.1_g215020 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.7e-06 57.0 195 28.2
CSS0036759 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-06 56.6 169 29.0
Hma1.2p1_2049F.1_g312480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-06 56.6 193 24.9
SHI33540 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 56.6 153 32.0
Ca_19090_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.9e-06 56.2 121 30.6
ECA234G1796 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-06 56.2 179 24.0
HanXRQChr09g0272931 Helianthus annuus HOM05D000002 ORTHO05D000001 2.9e-06 56.2 205 22.4
QL01p003494 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-06 56.2 54 48.1
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.8e-06 55.8 186 25.8
Hma1.2p1_1768F.1_g301590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.8e-06 55.8 178 25.8
Manes.10G112229 Manihot esculenta HOM05D000002 ORTHO05D000001 3.8e-06 55.8 151 29.8
Nn1g09172 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.8e-06 55.8 130 29.2
PSO063G7113 Papaver somniferum HOM05D000002 ORTHO05D000001 3.8e-06 55.8 108 30.6
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.8e-06 55.8 186 24.7
Manes.08G103711 Manihot esculenta HOM05D000002 ORTHO05D000001 4.9e-06 55.5 120 35.0
Os08g0125300 Oryza sativa ssp. japonica HOM05D000002 ORTHO05D000001 4.9e-06 55.5 140 27.1
CSS0016912 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.4e-06 55.1 119 29.4
CSS0040555 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.4e-06 54.7 119 29.4
Nn6g34560 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.4e-06 54.7 179 24.6
Nn6g34561 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.4e-06 54.7 179 24.6


User provided reference genes

Program Settings