Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28309 Sapria himalayana HOM05D009321 ORTHO05D000285 1.8e-245 852.0 409 100.0
COL.COLO4_20268 Corchorus olitorius HOM05D009321 ORTHO05D000285 2.1e-36 157.5 155 57.4
COL.COLO4_15652 Corchorus olitorius HOM05D009321 ORTHO05D000285 1.4e-35 154.8 154 57.1
SHI22075 Sapria himalayana HOM05D009321 ORTHO05D000285 3.1e-35 153.7 145 60.0
SHI26689 Sapria himalayana HOM05D009321 ORTHO05D000285 1.0e-33 148.7 148 58.1
SHI05128 Sapria himalayana HOM05D009321 ORTHO05D000285 6.5e-33 146.0 160 54.4
Rhsim06G0160000 Rhododendron simsii HOM05D000034 ORTHO05D000285 2.7e-31 140.6 168 42.9
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.6e-31 139.8 199 37.7
vmacro11323 Vaccinium macrocarpon HOM05D009321 ORTHO05D000285 1.8e-30 137.9 195 36.4
vmacro15326 Vaccinium macrocarpon HOM05D009321 ORTHO05D000285 8.2e-28 129.0 184 39.1
SHI03537 Sapria himalayana HOM05D009321 ORTHO05D000285 5.0e-25 119.8 148 50.0
SHI16839 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-24 115.5 118 56.8
COL.COLO4_28651 Corchorus olitorius HOM05D009321 ORTHO05D000285 6.1e-23 112.8 129 53.5
COL.COLO4_37431 Corchorus olitorius HOM05D009321 ORTHO05D000285 1.4e-19 101.7 145 46.2
SHI20572 Sapria himalayana HOM05D001026 ORTHO05D005232 2.2e-17 94.4 84 61.9
SHI25442 Sapria himalayana HOM05D000105 ORTHO05D000023 3.8e-17 93.6 168 36.3
Rhsim04G0145700 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.2e-16 90.1 167 32.3
vmacro15904 Vaccinium macrocarpon HOM05D007516 ORTHO05D000285 2.7e-15 87.4 167 35.3
SHI20926 Sapria himalayana HOM05D009321 ORTHO05D000285 8.8e-14 82.4 54 74.1
Rhsim05G0210200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.5e-13 81.6 167 31.7
SHI03783 Sapria himalayana HOM05D009321 ORTHO05D000285 1.5e-13 81.6 137 37.2
SHI33791 Sapria himalayana HOM05D009321 ORTHO05D000285 1.7e-12 78.2 117 42.7
Rhsim05G0208900 Rhododendron simsii HOM05D009321 ORTHO05D000285 1.4e-11 75.1 93 41.9
GSVIVG01023166001 Vitis vinifera HOM05D007516 ORTHO05D000285 1.4e-11 75.1 194 25.8
Rhsim05G0209100 Rhododendron simsii HOM05D009321 ORTHO05D000285 1.2e-10 72.0 85 44.7
Rhsim04G0111300 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.5e-10 71.6 119 36.1
Rhsim05G0209600 Rhododendron simsii HOM05D009321 ORTHO05D000285 2.0e-10 71.2 65 49.2
Rhsim05G0209800 Rhododendron simsii HOM05D009321 ORTHO05D000285 2.6e-10 70.9 132 34.8
SHI13877 Sapria himalayana HOM05D009321 ORTHO05D000285 7.7e-10 69.3 48 66.7
Rhsim05G0208800 Rhododendron simsii HOM05D009321 ORTHO05D000285 2.2e-09 67.8 85 42.4
Rhsim05G0208600 Rhododendron simsii HOM05D009321 ORTHO05D000285 2.9e-09 67.4 109 39.4
SHI19866 Sapria himalayana HOM05D009321 ORTHO05D000285 3.2e-08 63.9 38 76.3
SHI28733 Sapria himalayana HOM05D009321 ORTHO05D000285 7.2e-08 62.8 94 45.7
SHI27479 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-07 62.0 122 37.7
PGSC0003DMG400038524 Solanum tuberosum HOM05D008357 ORTHO05D000285 4.7e-07 60.1 190 27.4
GSVIVG01030009001 Vitis vinifera HOM05D007516 ORTHO05D000285 3.0e-06 57.4 168 25.6


User provided reference genes

Program Settings