Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28306 Sapria himalayana HOM05D001890 ORTHO05D003442 8.8e-142 506.9 251 100.0
Gohir.A09G132700 Gossypium hirsutum HOM05D001890 ORTHO05D003442 1.3e-31 141.0 115 60.0
Gohir.D09G129000 Gossypium hirsutum HOM05D001890 ORTHO05D003442 1.3e-31 141.0 115 60.0
Gorai.006G147700 Gossypium raimondii HOM05D001890 ORTHO05D003442 1.3e-31 141.0 115 60.0
Duzib093G1618 Durio zibethinus HOM05D001890 ORTHO05D003442 1.7e-31 140.6 116 60.3
Duzib128G1367 Durio zibethinus HOM05D001890 ORTHO05D003442 2.8e-31 139.8 115 61.7
TWI77G0744 Tripterygium wilfordii HOM05D001890 ORTHO05D003442 8.3e-31 138.3 139 51.1
CANSAT64G0653 Cannabis sativa HOM05D001890 ORTHO05D003442 1.1e-30 137.9 139 51.1
Sed0014759 Sechium edule HOM05D001890 ORTHO05D003442 1.1e-30 137.9 139 50.4
Cfa020085 Carpinus fangiana HOM05D001890 ORTHO05D003442 1.4e-30 137.5 142 52.1
Glyma.10G083700 Glycine max HOM05D001890 ORTHO05D003442 1.4e-30 137.5 139 49.6
Thecc.05G108400 Theobroma cacao HOM05D001890 ORTHO05D003442 1.4e-30 137.5 112 60.7
Gorai.002G153500 Gossypium raimondii HOM05D001890 ORTHO05D003442 1.8e-30 137.1 112 59.8
Sed0025654 Sechium edule HOM05D001890 ORTHO05D003442 1.8e-30 137.1 112 55.4
CsaV3_3G038170 Cucumis sativus L. HOM05D001890 ORTHO05D003442 2.4e-30 136.7 139 49.6
Gohir.D01G122600 Gossypium hirsutum HOM05D001890 ORTHO05D003442 2.4e-30 136.7 112 59.8
Potri.016G067000 Populus trichocarpa HOM05D001890 ORTHO05D003442 3.1e-30 136.3 139 52.5
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 3.1e-30 136.3 139 48.2
CiPaw.09G022800 Carya illinoinensis HOM05D001890 ORTHO05D003442 4.1e-30 136.0 139 49.6
QL07p026881 Quercus lobata HOM05D001890 ORTHO05D003442 4.1e-30 136.0 139 47.5
Sed0008069 Sechium edule HOM05D001890 ORTHO05D003442 4.1e-30 136.0 108 59.3
Manes.09G043100 Manihot esculenta HOM05D001890 ORTHO05D003442 5.4e-30 135.6 112 58.9
Phvul.007G266400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 5.4e-30 135.6 139 47.5
TAR369G0675 Trochodendron aralioides HOM05D001890 ORTHO05D003442 5.4e-30 135.6 115 58.3
VMungo0720G1360 Vigna mungo HOM05D001890 ORTHO05D003442 5.4e-30 135.6 139 47.5
arahy.Tifrunner.gnm1.ann1.AQHB6D Arachis hypogaea HOM05D001890 ORTHO05D003442 7.0e-30 135.2 140 47.9
Cc01_g02980 Coffea canephora HOM05D001890 ORTHO05D003442 7.0e-30 135.2 112 55.4
Medtr1g055315 Medicago truncatula HOM05D001890 ORTHO05D003442 7.0e-30 135.2 132 50.8
ClCG10G018130 Citrullus lanatus HOM05D001890 ORTHO05D003442 9.1e-30 134.8 139 50.4
Cpa.g.sc104.3 Carica papaya HOM05D001890 ORTHO05D003442 1.2e-29 134.4 142 49.3
Sabra16G0068300 Salix brachista HOM05D001890 ORTHO05D003442 1.2e-29 134.4 140 51.4
CSS0016780 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D003442 1.6e-29 134.0 139 48.9
arahy.Tifrunner.gnm1.ann1.M3JRXW Arachis hypogaea HOM05D001890 ORTHO05D003442 2.7e-29 133.3 135 48.1
COL.COLO4_29518 Corchorus olitorius HOM05D001890 ORTHO05D003442 2.7e-29 133.3 115 58.3
Psat6g097960 Pisum sativum HOM05D001890 ORTHO05D003442 2.7e-29 133.3 139 48.2
TAR623G0995 Trochodendron aralioides HOM05D001890 ORTHO05D003442 2.7e-29 133.3 115 56.5
Ca_11670_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 3.5e-29 132.9 140 45.7
SalBow5G5266 Salvia bowleyana HOM05D001890 ORTHO05D003442 3.5e-29 132.9 139 48.2
arahy.Tifrunner.gnm1.ann1.3V0CBS Arachis hypogaea HOM05D001890 ORTHO05D003442 4.5e-29 132.5 138 46.4
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 5.9e-29 132.1 104 59.6
Cc01_g03030 Coffea canephora HOM05D001890 ORTHO05D003442 7.7e-29 131.7 109 56.0
Gohir.A01G135400 Gossypium hirsutum HOM05D001890 ORTHO05D003442 7.7e-29 131.7 112 58.9
CiPaw.10G019600 Carya illinoinensis HOM05D001890 ORTHO05D003442 1.0e-28 131.3 139 48.9
Haze_20107 Corylus avellana HOM05D001890 ORTHO05D003442 1.0e-28 131.3 158 46.2
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 1.7e-28 130.6 109 56.0
Oeu020167.1 Olea europaea HOM05D001890 ORTHO05D003442 1.7e-28 130.6 112 55.4
FvH4_6g20770 Fragaria vesca HOM05D001890 ORTHO05D003442 2.2e-28 130.2 109 55.0
THA.LOC104816629 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 2.9e-28 129.8 113 54.0
Potri.006G201000 Populus trichocarpa HOM05D001890 ORTHO05D003442 5.0e-28 129.0 139 49.6
Migut.J00744 Erythranthe guttata HOM05D001890 ORTHO05D003442 8.5e-28 128.3 112 54.5
Manes.08G036000 Manihot esculenta HOM05D001890 ORTHO05D003442 8.5e-28 128.3 112 58.0
Actinidia07949 Actinidia chinensis HOM05D001890 ORTHO05D003442 1.1e-27 127.9 139 46.8
Ciclev10011250m.g Citrus clementina HOM05D001890 ORTHO05D003442 1.1e-27 127.9 142 47.9
Glyma.02G193200 Glycine max HOM05D001890 ORTHO05D003442 1.1e-27 127.9 139 45.3
Hma1.2p1_0969F.1_g242598 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 1.1e-27 127.9 139 47.5
Hma1.2p1_2851F.1_g329440 Hydrangea macrophylla HOM05D001890 ORTHO05D003442 1.1e-27 127.9 139 47.5
Glyma.19G201300 Glycine max HOM05D001890 ORTHO05D003442 1.5e-27 127.5 103 59.2
Lalb_Chr01g0017781 Lupinus albus HOM05D001890 ORTHO05D003442 1.5e-27 127.5 139 43.9
AL6G16530 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 1.9e-27 127.1 109 53.2
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 1.9e-27 127.1 108 55.6
Eucgr.A02559 Eucalyptus grandis HOM05D001890 ORTHO05D003442 2.5e-27 126.7 112 51.8
Rhsim02G0181100 Rhododendron simsii HOM05D001890 ORTHO05D003442 2.5e-27 126.7 142 47.2
Prupe.7G091200 Prunus persica HOM05D001890 ORTHO05D003442 3.2e-27 126.3 111 55.0
Migut.L01851 Erythranthe guttata HOM05D001890 ORTHO05D003442 4.2e-27 125.9 112 53.6
Lj1g0026398 Lotus japonicus HOM05D001890 ORTHO05D003442 4.2e-27 125.9 112 51.8
Sc07g0006350 Simmondsia chinensis HOM05D001890 ORTHO05D003442 4.2e-27 125.9 149 48.3
MD12G1043900 Malus domestica HOM05D001890 ORTHO05D003442 5.5e-27 125.6 138 47.1
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 7.2e-27 125.2 105 55.2
Actinidia06190 Actinidia chinensis HOM05D001890 ORTHO05D003442 9.4e-27 124.8 139 46.0
AT5G06440 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 9.4e-27 124.8 109 53.2
A03p02730 Brassica napus HOM05D001890 ORTHO05D003442 9.4e-27 124.8 106 53.8
Lj1A1058T56 Lonicera japonica HOM05D001890 ORTHO05D003442 9.4e-27 124.8 111 53.2
Carub.0006s0532 Capsella rubella HOM05D001890 ORTHO05D003442 1.2e-26 124.4 109 52.3
MD14G1042900 Malus domestica HOM05D001890 ORTHO05D003442 1.2e-26 124.4 138 46.4
CARHR206750 Cardamine hirsuta HOM05D001890 ORTHO05D003442 1.6e-26 124.0 109 51.4
Glyma.03G203900 Glycine max HOM05D001890 ORTHO05D003442 1.6e-26 124.0 103 58.3
RcHm_v2.0_Chr3g0476671 Rosa chinensis HOM05D001890 ORTHO05D003442 1.6e-26 124.0 136 47.1
EL10Ac5g11825 Beta vulgaris HOM05D001890 ORTHO05D003442 2.1e-26 123.6 142 45.8
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 2.1e-26 123.6 109 52.3
Thhalv10013326m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 2.1e-26 123.6 112 50.9
PGR004G2025 Punica granatum HOM05D001890 ORTHO05D003442 2.7e-26 123.2 112 51.8
Sp6g36420 Schrenkiella parvula HOM05D001890 ORTHO05D003442 3.6e-26 122.9 139 45.3
Lalb_Chr20g0111261 Lupinus albus HOM05D001890 ORTHO05D003442 6.1e-26 122.1 163 41.7
Phvul.001G197400 Phaseolus vulgaris HOM05D001890 ORTHO05D003442 8.0e-26 121.7 104 52.9
BraA03t09636Z Brassica rapa HOM05D001890 ORTHO05D003442 1.0e-25 121.3 105 51.4
Psat3g028200 Pisum sativum HOM05D001890 ORTHO05D003442 1.0e-25 121.3 139 44.6
AUR62030696 Chenopodium quinoa HOM05D001890 ORTHO05D003442 1.4e-25 120.9 142 45.8
Peaxi162Scf00675g00056 Petunia axillaris HOM05D001890 ORTHO05D003442 1.4e-25 120.9 104 54.8
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 2.3e-25 120.2 109 51.4
BcaC06g32575 Brassica carinata HOM05D001890 ORTHO05D003442 3.0e-25 119.8 139 44.6
CDE04G0663 Ceratophyllum demersum HOM05D001890 ORTHO05D003442 3.0e-25 119.8 112 50.0
MBI11_g01309_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D003442 4.0e-25 119.4 139 42.4
Nn2g14393 Nelumbo nucifera HOM05D001890 ORTHO05D003442 4.0e-25 119.4 146 43.2
THA.LOC104826799 Tarenaya hassleriana HOM05D001890 ORTHO05D003442 4.0e-25 119.4 114 49.1
Aqoxy1G00604 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 6.8e-25 118.6 112 47.3
Ca_09069_v3 Cicer arietinum L. HOM05D001890 ORTHO05D003442 6.8e-25 118.6 139 43.9
Cc06_g06840 Coffea canephora HOM05D001890 ORTHO05D003442 6.8e-25 118.6 108 54.6
GSVIVG01022534001 Vitis vinifera HOM05D001890 ORTHO05D003442 6.8e-25 118.6 139 41.0
Solyc01g006870.4 Solanum lycopersicum HOM05D001890 ORTHO05D003442 1.2e-24 117.9 142 45.1
Sopen01g002860 Solanum pennellii HOM05D001890 ORTHO05D003442 1.2e-24 117.9 142 45.1
Nn6g34599 Nelumbo nucifera HOM05D001890 ORTHO05D003442 1.5e-24 117.5 212 34.0
Os11g0568700 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D003442 1.5e-24 117.5 110 50.9
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 2.0e-24 117.1 142 44.4
Lj5g0000561 Lotus japonicus HOM05D001890 ORTHO05D003442 2.0e-24 117.1 112 52.7
Solyc10g081770.3 Solanum lycopersicum HOM05D001890 ORTHO05D003442 2.0e-24 117.1 111 51.4
CAN.G911.29 Capsicum annuum HOM05D001890 ORTHO05D003442 2.6e-24 116.7 139 43.2
HanXRQChr02g0053331 Helianthus annuus HOM05D001890 ORTHO05D003442 2.6e-24 116.7 108 48.1
PGSC0003DMG400028231 Solanum tuberosum HOM05D001890 ORTHO05D003442 3.4e-24 116.3 112 50.9
TPR.G25807 Trifolium pratense HOM05D001890 ORTHO05D003442 3.4e-24 116.3 109 49.5
PSO339G5959 Papaver somniferum HOM05D001890 ORTHO05D003442 4.4e-24 115.9 139 40.3
CAN.G674.15 Capsicum annuum HOM05D001890 ORTHO05D003442 5.7e-24 115.5 108 53.7
BcaC06g32374 Brassica carinata HOM05D001890 ORTHO05D003442 7.5e-24 115.2 142 43.7
A10p29950 Brassica napus HOM05D001890 ORTHO05D003442 7.5e-24 115.2 139 43.2
C09p70360 Brassica napus HOM05D001890 ORTHO05D003442 7.5e-24 115.2 142 43.7
PSO384G4950 Papaver somniferum HOM05D001890 ORTHO05D003442 7.5e-24 115.2 139 40.3
HPP92_005860 Vanilla planifolia HOM05D001890 ORTHO05D003442 7.5e-24 115.2 108 50.9
Hund10836 Selenicereus undatus HOM05D001890 ORTHO05D003442 1.3e-23 114.4 142 43.0
Sopen10g032280 Solanum pennellii HOM05D001890 ORTHO05D003442 1.3e-23 114.4 112 50.9
A03p37250 Brassica napus HOM05D001890 ORTHO05D003442 1.7e-23 114.0 102 53.9
ECA233G4742 Erigeron canadensis HOM05D001890 ORTHO05D003442 1.7e-23 114.0 108 45.4
AUR62036337 Chenopodium quinoa HOM05D001890 ORTHO05D003442 3.7e-23 112.8 108 51.9
Medtr7g106640 Medicago truncatula HOM05D001890 ORTHO05D003442 3.7e-23 112.8 139 42.4
Nitab4.5_0005218g0020 Nicotiana tabacum HOM05D001890 ORTHO05D003442 3.7e-23 112.8 149 40.9
BcaB04g18657 Brassica carinata HOM05D001890 ORTHO05D003442 4.9e-23 112.5 100 53.0
Thhalv10020420m.g Eutrema salsugineum HOM05D001890 ORTHO05D003442 4.9e-23 112.5 104 51.9
Sabra06G0154700 Salix brachista HOM05D001890 ORTHO05D003442 6.3e-23 112.1 144 45.1
C03p45110 Brassica napus HOM05D001890 ORTHO05D003442 8.3e-23 111.7 102 52.0
BolC3t16775H Brassica oleracea HOM05D001890 ORTHO05D003442 8.3e-23 111.7 102 52.0
Aa31LG3G5200 Aethionema arabicum HOM05D001890 ORTHO05D003442 1.1e-22 111.3 109 49.5
BraA03t12885Z Brassica rapa HOM05D001890 ORTHO05D003442 1.1e-22 111.3 102 52.9
BcaB06g25587 Brassica carinata HOM05D001890 ORTHO05D003442 1.4e-22 110.9 107 50.5
PSO063G3472 Papaver somniferum HOM05D001890 ORTHO05D003442 1.8e-22 110.5 108 47.2
C05p56160 Brassica napus HOM05D001890 ORTHO05D003442 2.4e-22 110.2 107 50.5
Lsat_1_v5_gn_6_34701 Lactuca sativa HOM05D001890 ORTHO05D003442 2.4e-22 110.2 139 39.6
BcaC01g04089 Brassica carinata HOM05D001890 ORTHO05D003442 3.1e-22 109.8 102 52.9
AT3G11720 Arabidopsis thaliana HOM05D001890 ORTHO05D003442 5.4e-22 109.0 100 53.0
BolC5t34281H Brassica oleracea HOM05D001890 ORTHO05D003442 1.2e-21 107.8 107 49.5
SGA_v2.0_scaffold392G50676 Striga asiatica HOM05D001890 ORTHO05D003442 1.2e-21 107.8 95 51.6
AL3G23280 Arabidopsis lyrata HOM05D001890 ORTHO05D003442 1.6e-21 107.5 101 52.5
BraA05t22558Z Brassica rapa HOM05D001890 ORTHO05D003442 1.6e-21 107.5 107 50.5
BcaC05g29335 Brassica carinata HOM05D001890 ORTHO05D003442 2.0e-21 107.1 107 49.5
ATR0697G280 Amborella trichopoda HOM05D001890 ORTHO05D003442 2.7e-21 106.7 137 38.7
PSO384G4065 Papaver somniferum HOM05D001890 ORTHO05D003442 2.7e-21 106.7 115 41.7
CARHR086270 Cardamine hirsuta HOM05D001890 ORTHO05D003442 5.9e-21 105.5 101 52.5
BraA10t45034Z Brassica rapa HOM05D001890 ORTHO05D003442 1.0e-20 104.8 153 39.2
Sp3g09950 Schrenkiella parvula HOM05D001890 ORTHO05D003442 1.3e-20 104.4 104 48.1
BolC9t59781H Brassica oleracea HOM05D001890 ORTHO05D003442 1.7e-20 104.0 152 40.1
PSO339G0680 Papaver somniferum HOM05D001890 ORTHO05D003442 1.7e-20 104.0 112 39.3
Carub.0003s1106 Capsella rubella HOM05D001890 ORTHO05D003442 2.3e-20 103.6 101 50.5
PSO384G0895 Papaver somniferum HOM05D001890 ORTHO05D003442 2.3e-20 103.6 112 38.4
HanXRQChr13g0398661 Helianthus annuus HOM05D001890 ORTHO05D003442 5.0e-20 102.4 108 42.6
SEGI_19574 Sequoiadendron giganteum HOM05D001890 ORTHO05D003442 5.6e-19 99.0 107 43.9
Nitab4.5_0001918g0040 Nicotiana tabacum HOM05D001890 ORTHO05D003442 1.6e-18 97.4 96 51.0
vmacro09092 Vaccinium macrocarpon HOM05D001890 ORTHO05D003442 3.6e-18 96.3 110 47.3
arahy.Tifrunner.gnm1.ann1.JU9MFG Arachis hypogaea HOM05D001890 ORTHO05D003442 1.8e-17 94.0 107 43.0
Aqoxy2G00642 Aquilegia oxysepala HOM05D001890 ORTHO05D003442 8.9e-17 91.7 143 35.7
MSTRG.5917 Avicennia marina HOM05D001890 ORTHO05D003442 1.2e-16 91.3 82 53.7
A05p37600 Brassica napus HOM05D001890 ORTHO05D003442 2.0e-16 90.5 133 39.8
FAN05G0175 Fragaria x ananassa HOM05D001890 ORTHO05D003442 3.4e-16 89.7 80 53.8
FAN05G0573 Fragaria x ananassa HOM05D001890 ORTHO05D003442 3.4e-16 89.7 80 53.8
PSO339G3824 Papaver somniferum HOM05D001890 ORTHO05D003442 3.4e-16 89.7 92 46.7
Medtr2g066850 Medicago truncatula HOM05D002807 ORTHO05D018033 4.9e-15 85.9 96 44.8
MELO3C009560.2 Cucumis melo HOM05D001890 ORTHO05D003442 8.3e-15 85.1 139 37.4
SMO356G0493 Selaginella moellendorffii HOM05D001890 ORTHO05D003442 8.3e-15 85.1 114 36.0
PGSC0003DMG400021336 Solanum tuberosum HOM05D001890 ORTHO05D003442 5.4e-14 82.4 85 49.4
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 2.0e-13 80.5 72 51.4
arahy.Tifrunner.gnm1.ann1.M9SKFA Arachis hypogaea HOM05D001890 ORTHO05D003442 3.5e-13 79.7 70 52.9
Peaxi162Scf00203g00101 Petunia axillaris HOM05D001890 ORTHO05D003442 1.7e-12 77.4 78 46.2
Aa31sc52G250 Aethionema arabicum HOM05D001890 ORTHO05D003442 2.3e-12 77.0 79 44.3
Mapoly0007s0117 Marchantia polymorpha HOM05D001890 ORTHO05D003442 2.3e-12 77.0 112 33.9
PGR083G0563 Punica granatum HOM05D000218 ORTHO05D000125 2.3e-12 77.0 82 48.8
arahy.Tifrunner.gnm1.ann1.WTCC59 Arachis hypogaea HOM05D001890 ORTHO05D003442 2.5e-11 73.6 69 50.7
Pp3c15_23860 Physcomitrium patens HOM05D001890 ORTHO05D003442 1.6e-10 70.9 107 38.3
PSO063G7439 Papaver somniferum HOM05D001890 ORTHO05D003442 6.2e-10 68.9 62 50.0
Pp3c9_24430 Physcomitrium patens HOM05D001890 ORTHO05D003442 6.2e-10 68.9 107 34.6
arahy.Tifrunner.gnm1.ann1.0N260W Arachis hypogaea HOM05D001890 ORTHO05D000566 6.8e-09 65.5 81 45.7
FAN14G1848 Fragaria x ananassa HOM05D001890 ORTHO05D003442 8.9e-09 65.1 109 35.8
FAN09G2041 Fragaria x ananassa HOM05D001890 ORTHO05D003442 2.2e-07 60.5 104 34.6
arahy.Tifrunner.gnm1.ann1.F45T9K Arachis hypogaea HOM05D001890 ORTHO05D003442 2.9e-07 60.1 51 51.0
AagrBONN_evm.TU.Sc2ySwM_362.1054 Anthoceros agrestis HOM05D001890 ORTHO05D003442 1.1e-06 58.2 160 24.4
DCAR_013449 Daucus carota HOM05D001890 ORTHO05D003442 2.4e-06 57.0 104 33.7


User provided reference genes

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