Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28102 Sapria himalayana HOM05D002538 ORTHO05D003162 3.3e-29 131.0 62 100.0
Aqoxy4G00604 Aquilegia oxysepala HOM05D002538 ORTHO05D003162 8.9e-19 96.3 76 63.2
CSS0021581 Camellia sinensis var. sinensis HOM05D002538 ORTHO05D003162 8.9e-19 96.3 76 63.2
HanXRQChr17g0564931 Helianthus annuus HOM05D002538 ORTHO05D003162 8.9e-19 96.3 76 63.2
Lsat_1_v5_gn_4_27980 Lactuca sativa HOM05D002538 ORTHO05D003162 8.9e-19 96.3 76 63.2
Zm00001eb295820 Zea mays HOM05D002538 ORTHO05D003162 1.2e-18 95.9 76 61.8
Dinv40607 Davidia involucrata HOM05D002538 ORTHO05D003162 2.6e-18 94.7 76 61.8
HanXRQChr15g0480031 Helianthus annuus HOM05D002538 ORTHO05D003162 2.6e-18 94.7 76 61.8
Lsat_1_v5_gn_7_30920 Lactuca sativa HOM05D002538 ORTHO05D003162 2.6e-18 94.7 76 61.8
Nn1g06401 Nelumbo nucifera HOM05D002538 ORTHO05D003162 2.6e-18 94.7 76 61.8
SalBow8G1315 Salvia bowleyana HOM05D002538 ORTHO05D003162 2.6e-18 94.7 76 61.8
SalBow8G4204 Salvia bowleyana HOM05D002538 ORTHO05D003162 2.6e-18 94.7 76 61.8
TAR626G1005 Trochodendron aralioides HOM05D002538 ORTHO05D003162 2.6e-18 94.7 76 61.8
unitig_699.g19113 Utricularia gibba HOM05D002538 ORTHO05D003162 2.6e-18 94.7 76 61.8
Dinv17362 Davidia involucrata HOM05D002538 ORTHO05D003162 3.4e-18 94.4 76 60.5
Migut.M01100 Erythranthe guttata HOM05D002538 ORTHO05D003162 3.4e-18 94.4 76 60.5
Rhsim02G0135500 Rhododendron simsii HOM05D002538 ORTHO05D003162 3.4e-18 94.4 76 59.2
ECA236G0316 Erigeron canadensis HOM05D002538 ORTHO05D003162 4.4e-18 94.0 76 60.5
Hma1.2p1_0206F.1_g087630 Hydrangea macrophylla HOM05D002538 ORTHO05D003162 4.4e-18 94.0 76 60.5
Lj4g0011488 Lotus japonicus HOM05D002538 ORTHO05D003162 4.4e-18 94.0 76 60.5
CiPaw.10G053200 Carya illinoinensis HOM05D002538 ORTHO05D003162 5.8e-18 93.6 76 60.5
Manes.17G050000 Manihot esculenta HOM05D002538 ORTHO05D003162 5.8e-18 93.6 76 61.8
Hund21205 Selenicereus undatus HOM05D002538 ORTHO05D003162 5.8e-18 93.6 76 60.5
AUR62014880 Chenopodium quinoa HOM05D002538 ORTHO05D003162 7.5e-18 93.2 76 60.5
Lalb_Chr09g0327861 Lupinus albus HOM05D002538 ORTHO05D003162 7.5e-18 93.2 76 60.5
Lalb_Chr16g0384091 Lupinus albus HOM05D002538 ORTHO05D003162 7.5e-18 93.2 76 60.5
Nn1g04247 Nelumbo nucifera HOM05D002538 ORTHO05D003162 7.5e-18 93.2 77 59.7
TAR627G0078 Trochodendron aralioides HOM05D002538 ORTHO05D003162 7.5e-18 93.2 76 60.5
TAR627G0221 Trochodendron aralioides HOM05D002538 ORTHO05D003162 7.5e-18 93.2 76 60.5
vmacro03901 Vaccinium macrocarpon HOM05D002538 ORTHO05D003162 7.5e-18 93.2 76 59.2
Ciclev10014139m.g Citrus clementina HOM05D002538 ORTHO05D003162 9.8e-18 92.8 76 59.2
Glyma.07G202100 Glycine max HOM05D002538 ORTHO05D003162 9.8e-18 92.8 76 59.2
Glyma.13G174200 Glycine max HOM05D002538 ORTHO05D003162 9.8e-18 92.8 76 59.2
Lalb_Chr15g0089661 Lupinus albus HOM05D002538 ORTHO05D003162 9.8e-18 92.8 76 59.2
MBI13_g03361_MAGBIO Magnolia biondii HOM05D002538 ORTHO05D003162 9.8e-18 92.8 76 59.2
Oeu012159.2 Olea europaea HOM05D002538 ORTHO05D003162 9.8e-18 92.8 76 59.2
Peaxi162Scf00490g00311 Petunia axillaris HOM05D002538 ORTHO05D003162 9.8e-18 92.8 76 59.2
THA.LOC104798407 Tarenaya hassleriana HOM05D002538 ORTHO05D003162 9.8e-18 92.8 76 60.5
PSO210G7643 Papaver somniferum HOM05D002538 ORTHO05D003162 1.3e-17 92.4 76 59.2
PSO832G0299 Papaver somniferum HOM05D002538 ORTHO05D003162 1.3e-17 92.4 76 59.2
Phvul.003G290500 Phaseolus vulgaris HOM05D002538 ORTHO05D003162 1.3e-17 92.4 76 59.2
Psat7g116720 Pisum sativum HOM05D002538 ORTHO05D003162 1.3e-17 92.4 76 59.2
Sc17g0005890 Simmondsia chinensis HOM05D002538 ORTHO05D003162 1.3e-17 92.4 76 59.2
vmacro15938 Vaccinium macrocarpon HOM05D002538 ORTHO05D003162 1.3e-17 92.4 76 57.9
Eucgr.C03068 Eucalyptus grandis HOM05D002538 ORTHO05D003162 1.7e-17 92.0 76 60.5
Potri.011G058500 Populus trichocarpa HOM05D002538 ORTHO05D003162 1.7e-17 92.0 76 59.2
PGR004G1187 Punica granatum HOM05D002538 ORTHO05D003162 1.7e-17 92.0 76 59.2
Rhsim13G0180600 Rhododendron simsii HOM05D002538 ORTHO05D003162 1.7e-17 92.0 76 59.2
MSTRG.7364 Avicennia marina HOM05D002538 ORTHO05D003162 2.2e-17 91.7 76 60.5
Nitab4.5_0006826g0020 Nicotiana tabacum HOM05D002538 ORTHO05D003162 2.2e-17 91.7 76 57.9
Sabra11G0040600 Salix brachista HOM05D002538 ORTHO05D003162 2.2e-17 91.7 76 57.9
arahy.Tifrunner.gnm1.ann1.BNQL10 Arachis hypogaea HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 57.9
arahy.Tifrunner.gnm1.ann1.T00U8Q Arachis hypogaea HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 57.9
CAN.G529.62 Capsicum annuum HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 57.9
Cpa.g.sc1080.3 Carica papaya HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 57.9
Cfa000535 Carpinus fangiana HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 56.6
CDE02G1050 Ceratophyllum demersum HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 59.2
Haze_06366 Corylus avellana HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 56.6
DCAR_024895 Daucus carota HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 57.9
ECA234G1452 Erigeron canadensis HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 57.9
Manes.16G032600 Manihot esculenta HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 59.2
Sed0000642 Sechium edule HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 57.9
Sopen10g004740 Solanum pennellii HOM05D002538 ORTHO05D003162 2.9e-17 91.3 76 56.6
SGA_v2.0_scaffold309G48172 Striga asiatica HOM05D002538 ORTHO05D003162 2.9e-17 91.3 74 62.2
EL10Ac8g20445 Beta vulgaris HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 59.2
ClCG00G002770 Citrullus lanatus HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 56.6
ClCG01G023320 Citrullus lanatus HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 56.6
MELO3C007254.2 Cucumis melo HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 56.6
CsaV3_6G050460 Cucumis sativus L. HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 56.6
Glyma.13G234600 Glycine max HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 57.9
Phvul.006G181400 Phaseolus vulgaris HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 57.9
Potri.004G049400 Populus trichocarpa HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 57.9
Sabra04G0031100 Salix brachista HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 57.9
Sed0021408 Sechium edule HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 56.6
HPP92_020202 Vanilla planifolia HOM05D002538 ORTHO05D003162 3.7e-17 90.9 76 57.9
GSVIVG01021122001 Vitis vinifera HOM05D002538 ORTHO05D003162 4.9e-17 90.5 76 57.9
Gohir.A06G127200 Gossypium hirsutum HOM05D002538 ORTHO05D003162 6.4e-17 90.1 76 61.8
Gohir.D06G135500 Gossypium hirsutum HOM05D002538 ORTHO05D003162 6.4e-17 90.1 76 61.8
Gorai.010G157500 Gossypium raimondii HOM05D002538 ORTHO05D003162 6.4e-17 90.1 76 61.8
Solyc10g008950.3 Solanum lycopersicum HOM05D002538 ORTHO05D003162 6.4e-17 90.1 76 55.3
EL10Ac7g17568 Beta vulgaris HOM05D002538 ORTHO05D003162 8.3e-17 89.7 76 56.6
Lj1C1200G23 Lonicera japonica HOM05D002538 ORTHO05D003162 8.3e-17 89.7 76 57.9
Os02g0307000 Oryza sativa ssp. japonica HOM05D002538 ORTHO05D003162 8.3e-17 89.7 76 57.9
PSO541G2371 Papaver somniferum HOM05D002538 ORTHO05D003162 8.3e-17 89.7 76 59.2
PSO675G8802 Papaver somniferum HOM05D002538 ORTHO05D003162 8.3e-17 89.7 76 59.2
QL05p042992 Quercus lobata HOM05D002538 ORTHO05D003162 8.3e-17 89.7 76 56.6
Solyc02g077600.3 Solanum lycopersicum HOM05D002538 ORTHO05D003162 8.3e-17 89.7 76 56.6
Sopen02g022500 Solanum pennellii HOM05D002538 ORTHO05D003162 8.3e-17 89.7 76 56.6
Thecc.06G180200 Theobroma cacao HOM05D002538 ORTHO05D003162 8.3e-17 89.7 76 60.5
CARHR175860 Cardamine hirsuta HOM05D002538 ORTHO05D003162 1.1e-16 89.4 76 56.6
CiPaw.09G064200 Carya illinoinensis HOM05D002538 ORTHO05D003162 1.1e-16 89.4 76 56.6
Ca_18600_v3 Cicer arietinum L. HOM05D002538 ORTHO05D003162 1.1e-16 89.4 76 57.9
Medtr4g088220 Medicago truncatula HOM05D002538 ORTHO05D003162 1.1e-16 89.4 76 57.9
CSS0006869 Camellia sinensis var. sinensis HOM05D002538 ORTHO05D003162 1.4e-16 89.0 76 56.6
Cc02_g14020 Coffea canephora HOM05D002538 ORTHO05D003162 1.4e-16 89.0 76 59.2
COL.COLO4_31408 Corchorus olitorius HOM05D002538 ORTHO05D003162 1.4e-16 89.0 76 60.5
FvH4_3g08471 Fragaria vesca HOM05D002538 ORTHO05D003162 1.4e-16 89.0 76 56.6
FAN11G3059 Fragaria x ananassa HOM05D002538 ORTHO05D003162 1.4e-16 89.0 76 56.6
MBI06_g04404_MAGBIO Magnolia biondii HOM05D002538 ORTHO05D003162 1.4e-16 89.0 76 56.6
CAN.G813.6 Capsicum annuum HOM05D002538 ORTHO05D003162 1.9e-16 88.6 76 56.6
DCAR_028041 Daucus carota HOM05D002538 ORTHO05D003162 1.9e-16 88.6 76 56.6
Nitab4.5_0003315g0010 Nicotiana tabacum HOM05D002538 ORTHO05D003162 1.9e-16 88.6 76 56.6
SHI01520 Sapria himalayana HOM05D002538 ORTHO05D003162 1.9e-16 88.6 75 60.0
SGA_v2.0_scaffold16G07643 Striga asiatica HOM05D002538 ORTHO05D003162 1.9e-16 88.6 74 60.8
Hund18210 Selenicereus undatus HOM05D002538 ORTHO05D003162 2.4e-16 88.2 76 55.3
Hund23821 Selenicereus undatus HOM05D002538 ORTHO05D003162 2.4e-16 88.2 76 56.6
AL8G12440 Arabidopsis lyrata HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
AT5G46070 Arabidopsis thaliana HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
BcaB07g30857 Brassica carinata HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
BcaC04g21734 Brassica carinata HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
A09p22060 Brassica napus HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
C09p28210 Brassica napus HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
BolC9t55694H Brassica oleracea HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
BraA09t37812Z Brassica rapa HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
Carub.0008s0186 Capsella rubella HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
AUR62008705 Chenopodium quinoa HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 56.6
FAN16G1530 Fragaria x ananassa HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
FAN21G0308 Fragaria x ananassa HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
FAN25G0596 Fragaria x ananassa HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
Sp2g10920 Schrenkiella parvula HOM05D002538 ORTHO05D003162 3.2e-16 87.8 76 55.3
ATR0602G206 Amborella trichopoda HOM05D002538 ORTHO05D003162 4.1e-16 87.4 76 55.3
Thhalv10000755m.g Eutrema salsugineum HOM05D002538 ORTHO05D003162 4.1e-16 87.4 76 55.3
Sopen09g026580 Solanum pennellii HOM05D002538 ORTHO05D003162 4.1e-16 87.4 76 53.9
Sopen11g019190 Solanum pennellii HOM05D002538 ORTHO05D003162 4.1e-16 87.4 76 55.3
Atru.chr10.1782 Acer truncatum HOM05D002538 ORTHO05D003162 7.0e-16 86.7 76 53.9
C07p29240 Brassica napus HOM05D002538 ORTHO05D003162 7.0e-16 86.7 76 56.6
BolC7t43466H Brassica oleracea HOM05D002538 ORTHO05D003162 7.0e-16 86.7 76 56.6
Gohir.A10G028300 Gossypium hirsutum HOM05D002538 ORTHO05D003162 7.0e-16 86.7 76 59.2
Gohir.D10G028700 Gossypium hirsutum HOM05D002538 ORTHO05D003162 7.0e-16 86.7 76 59.2
Gorai.011G030500 Gossypium raimondii HOM05D002538 ORTHO05D003162 7.0e-16 86.7 76 59.2
Sopen03g011240 Solanum pennellii HOM05D002538 ORTHO05D002334 7.0e-16 86.7 76 53.9
A06p46220 Brassica napus HOM05D002538 ORTHO05D003162 1.2e-15 85.9 76 55.3
BraA06t27486Z Brassica rapa HOM05D002538 ORTHO05D003162 1.2e-15 85.9 76 55.3
CANSAT35G0219 Cannabis sativa HOM05D002538 ORTHO05D003162 1.2e-15 85.9 76 53.9
Nitab4.5_0007082g0020 Nicotiana tabacum HOM05D002538 ORTHO05D003162 1.2e-15 85.9 75 56.0
Zm00001eb235320 Zea mays HOM05D002538 ORTHO05D003162 1.2e-15 85.9 76 55.3
Aa31LG9G6820 Aethionema arabicum HOM05D002538 ORTHO05D003162 2.0e-15 85.1 76 52.6
BcaC06g31502 Brassica carinata HOM05D002538 ORTHO05D003162 2.7e-15 84.7 76 53.9
Prupe.4G053400 Prunus persica HOM05D002538 ORTHO05D003162 2.7e-15 84.7 75 56.0
Zm00001eb351370 Zea mays HOM05D002538 ORTHO05D003162 2.7e-15 84.7 72 56.9
MD05G1309600 Malus domestica HOM05D002538 ORTHO05D003162 3.5e-15 84.3 75 56.0
TWI38G0418 Tripterygium wilfordii HOM05D002538 ORTHO05D003162 3.5e-15 84.3 75 56.0
Solyc01g066614.1 Solanum lycopersicum HOM05D002538 ORTHO05D003162 4.6e-15 84.0 76 51.3
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 4.6e-15 84.0 76 51.3
Os05g0563100 Oryza sativa ssp. japonica HOM05D002538 ORTHO05D003162 6.0e-15 83.6 75 54.7
Solyc02g005007.1 Solanum lycopersicum HOM05D002538 ORTHO05D003162 6.0e-15 83.6 76 51.3
Zm00001eb096460 Zea mays HOM05D002538 ORTHO05D003162 7.8e-15 83.2 47 76.6
MD10G1288200 Malus domestica HOM05D002538 ORTHO05D003162 1.0e-14 82.8 75 54.7
RcHm_v2.0_Chr5g0009341 Rosa chinensis HOM05D002538 ORTHO05D003162 1.7e-14 82.0 74 51.4
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 3.9e-14 80.9 43 81.4
AUR62031088 Chenopodium quinoa HOM05D002538 ORTHO05D003162 5.0e-14 80.5 47 74.5
TAR624G1203 Trochodendron aralioides HOM05D002538 ORTHO05D003162 6.6e-14 80.1 47 74.5
Atru.chr10.1781 Acer truncatum HOM05D002538 ORTHO05D003162 1.1e-13 79.3 76 50.0
Ah.14g089710 Amaranthus hybridus HOM05D002538 ORTHO05D003162 1.1e-13 79.3 47 72.3
Ah.15g093000 Amaranthus hybridus HOM05D002538 ORTHO05D003162 1.1e-13 79.3 47 72.3
Eucgr.D00590 Eucalyptus grandis HOM05D002538 ORTHO05D003162 1.1e-13 79.3 47 72.3
Solyc12g021363.1 Solanum lycopersicum HOM05D002538 ORTHO05D003162 1.1e-13 79.3 71 53.5
unitig_27.g24978 Utricularia gibba HOM05D002538 ORTHO05D003162 1.5e-13 79.0 78 53.8
Nitab4.5_0001955g0010 Nicotiana tabacum HOM05D002538 ORTHO05D003162 1.9e-13 78.6 47 70.2
AUR62025528 Chenopodium quinoa HOM05D002538 ORTHO05D003162 2.5e-13 78.2 43 79.1
COL.COLO4_37677 Corchorus olitorius HOM05D002538 ORTHO05D003162 2.5e-13 78.2 74 52.7
Peaxi162Scf00099g00079 Petunia axillaris HOM05D002538 ORTHO05D003162 7.3e-13 76.6 47 70.2
Pp3c2_33790 Physcomitrium patens HOM05D002538 ORTHO05D003162 9.5e-13 76.3 76 47.4
Potri.017G016800 Populus trichocarpa HOM05D002538 ORTHO05D003162 9.5e-13 76.3 76 48.7
Mapoly0197s0017 Marchantia polymorpha HOM05D002538 ORTHO05D003162 1.2e-12 75.9 74 50.0
Solyc11g013740.3 Solanum lycopersicum HOM05D002538 ORTHO05D003162 1.6e-12 75.5 47 68.1
Mapoly0197s0019 Marchantia polymorpha HOM05D002538 ORTHO05D003162 2.1e-12 75.1 74 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2138 Anthoceros agrestis HOM05D002538 ORTHO05D003162 2.8e-12 74.7 74 47.3
SMO137G0049 Selaginella moellendorffii HOM05D002538 ORTHO05D003162 2.8e-12 74.7 74 48.6
Pp3c1_10700 Physcomitrium patens HOM05D002538 ORTHO05D003162 3.6e-12 74.3 75 46.7
Sabra17G0013000 Salix brachista HOM05D002538 ORTHO05D003162 6.2e-12 73.6 76 47.4
Eucgr.L03330 Eucalyptus grandis HOM05D002538 ORTHO05D003162 1.4e-11 72.4 76 48.7
Sopen04g013900 Solanum pennellii HOM05D002538 ORTHO05D003162 1.4e-11 72.4 47 61.7
Nitab4.5_0002114g0140 Nicotiana tabacum HOM05D002538 ORTHO05D003162 1.8e-11 72.0 64 59.4
CBR_g39543 Chara braunii HOM05D002538 ORTHO05D003162 6.8e-11 70.1 77 44.2
Nitab4.5_0010054g0010 Nicotiana tabacum HOM05D002538 ORTHO05D003162 1.5e-10 68.9 58 62.1
Pp3c3_11940 Physcomitrium patens HOM05D002538 ORTHO05D003162 3.4e-10 67.8 74 43.2
TPR.G13654 Trifolium pratense HOM05D002538 ORTHO05D003162 3.7e-09 64.3 77 49.4
TPR.G14940 Trifolium pratense HOM05D002538 ORTHO05D003162 4.9e-09 63.9 37 81.1
Cre11.g467610 Chlamydomonas reinhardtii HOM05D002538 ORTHO05D003162 1.4e-08 62.4 76 43.4
PRCOL_00003946 Prasinoderma coloniale HOM05D002538 ORTHO05D003162 3.2e-08 61.2 72 43.1
Pp3c12_11340 Physcomitrium patens HOM05D002538 ORTHO05D003162 7.1e-08 60.1 74 39.2


User provided reference genes

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