Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 1.1e-170 603.2 296 100.0
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 1.6e-94 350.1 258 65.9
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 2.8e-94 349.4 257 66.9
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 8.9e-93 344.4 257 66.1
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 9.9e-92 340.9 267 63.3
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.9e-90 336.7 236 66.1
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 2.4e-90 336.3 211 74.4
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 7.1e-90 334.7 281 62.3
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 1.2e-89 334.0 211 73.9
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 1.6e-89 333.6 221 71.0
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 2.7e-89 332.8 279 59.9
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.0e-88 329.3 203 73.4
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 3.0e-88 329.3 203 73.4
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 3.9e-88 328.9 221 71.0
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 3.9e-88 328.9 259 63.3
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.9e-88 328.9 203 72.9
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 5.1e-88 328.6 252 64.3
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 1.1e-87 327.4 217 71.0
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 1.5e-87 327.0 254 63.8
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 1.5e-87 327.0 209 72.2
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 1.9e-87 326.6 216 71.3
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 3.3e-87 325.9 219 70.3
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 7.3e-87 324.7 205 73.7
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 7.3e-87 324.7 205 73.7
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 7.3e-87 324.7 205 73.7
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 9.6e-87 324.3 262 63.7
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 1.3e-86 323.9 265 61.5
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 1.3e-86 323.9 219 69.9
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 1.3e-86 323.9 212 71.7
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 1.3e-86 323.9 212 69.3
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.3e-86 323.9 205 73.7
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 1.6e-86 323.6 203 73.4
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 1.6e-86 323.6 216 69.4
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 2.1e-86 323.2 212 69.3
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 3.6e-86 322.4 211 71.6
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 6.2e-86 321.6 277 58.8
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 8.1e-86 321.2 212 71.2
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 1.1e-85 320.9 258 62.8
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 1.1e-85 320.9 234 68.8
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 1.4e-85 320.5 204 72.1
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.8e-85 320.1 216 69.4
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 2.4e-85 319.7 206 73.8
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 2.4e-85 319.7 216 69.0
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 3.1e-85 319.3 236 66.1
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 3.1e-85 319.3 204 71.6
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 4.0e-85 318.9 253 62.8
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 6.9e-85 318.2 269 59.5
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 6.9e-85 318.2 250 62.0
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 9.0e-85 317.8 207 73.4
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.5e-84 317.0 288 57.3
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 1.5e-84 317.0 295 55.3
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 1.5e-84 317.0 216 67.1
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 2.6e-84 316.2 286 57.7
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 2.6e-84 316.2 211 70.6
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 3.4e-84 315.8 245 62.4
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 4.5e-84 315.5 269 61.0
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 4.5e-84 315.5 250 61.6
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 5.8e-84 315.1 206 71.8
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 5.8e-84 315.1 207 70.0
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 5.8e-84 315.1 285 56.5
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 9.9e-84 314.3 205 72.2
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.3e-83 313.9 217 67.3
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.3e-83 313.9 286 56.6
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 1.3e-83 313.9 205 71.7
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 2.2e-83 313.2 206 73.3
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 3.8e-83 312.4 211 69.7
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 4.9e-83 312.0 212 70.8
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 8.4e-83 311.2 280 58.2
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 1.1e-82 310.8 199 71.9
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.1e-82 310.8 213 67.6
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 1.4e-82 310.5 214 70.1
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.9e-82 310.1 297 55.6
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 1.9e-82 310.1 222 67.6
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 4.2e-82 308.9 235 63.4
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 4.2e-82 308.9 218 67.9
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 4.2e-82 308.9 214 69.6
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 4.2e-82 308.9 211 69.2
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 4.2e-82 308.9 206 71.8
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 7.1e-82 308.1 216 65.7
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 1.2e-81 307.4 216 68.1
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.2e-81 307.4 207 71.0
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 2.7e-81 306.2 222 65.8
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 4.6e-81 305.4 278 57.2
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 1.0e-80 304.3 227 63.4
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 1.3e-80 303.9 188 72.9
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 1.8e-80 303.5 205 68.3
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 1.8e-80 303.5 205 68.3
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 2.3e-80 303.1 237 62.9
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 2.3e-80 303.1 205 67.8
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 2.3e-80 303.1 205 67.8
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 2.3e-80 303.1 205 67.8
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 2.3e-80 303.1 188 72.3
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 8.7e-80 301.2 205 67.3
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 1.5e-79 300.4 197 69.5
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 1.5e-79 300.4 197 68.5
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.9e-79 300.1 224 64.3
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 2.5e-79 299.7 202 67.3
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 4.3e-79 298.9 197 67.0
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 4.3e-79 298.9 214 64.5
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 4.3e-79 298.9 214 64.5
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 4.3e-79 298.9 197 68.5
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 1.3e-78 297.4 206 67.0
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 1.3e-78 297.4 206 67.0
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 1.6e-78 297.0 194 72.2
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 4.8e-78 295.4 246 58.1
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 8.1e-78 294.7 203 68.0
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 9.0e-77 291.2 198 66.7
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 1.2e-76 290.8 244 58.2
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 3.4e-76 289.3 198 66.7
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 5.8e-76 288.5 230 60.4
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.3e-75 287.3 230 60.4
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.1e-74 284.3 265 52.5
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 1.4e-74 283.9 198 66.2
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 7.1e-74 281.6 199 62.3
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 1.3e-72 277.3 308 50.6
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 6.7e-72 275.0 271 48.3
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.9e-71 273.5 253 53.0
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 6.2e-70 268.5 241 57.7
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 6.0e-65 251.9 207 55.6
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 6.7e-64 248.4 238 48.3
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 1.5e-63 247.3 162 70.4
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 1.5e-60 237.3 162 65.4
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 2.2e-59 233.4 156 71.2
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 1.1e-58 231.1 139 79.9
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.1e-58 231.1 275 48.0
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.4e-58 230.7 161 65.2
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 3.7e-54 216.1 147 66.7
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 6.9e-53 211.8 201 50.2
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 1.1e-50 204.5 144 65.3
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 1.6e-41 174.1 151 55.0
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 4.7e-41 172.6 117 66.7
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 6.7e-40 168.7 169 47.3
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 1.7e-38 164.1 146 54.8
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.9e-26 124.0 111 50.5
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 4.8e-22 109.4 139 47.5
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.0e-20 104.0 151 43.0
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 2.3e-19 100.5 82 52.4
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 2.6e-15 87.0 57 73.7
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 7.5e-15 85.5 105 44.8
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 7.5e-15 85.5 120 44.2
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 1.3e-14 84.7 139 43.9
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 2.7e-12 77.0 123 41.5
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 3.0e-08 63.5 43 67.4


User provided reference genes

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