Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI27843 Sapria himalayana HOM05D003173 ORTHO05D003546 6.6e-96 354.0 172 100.0
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 2.2e-91 339.0 171 97.1
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 3.7e-91 338.2 171 97.1
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 5.4e-90 334.3 171 95.9
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.2e-17 94.0 183 38.3
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 3.0e-16 89.4 173 37.0
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 7.4e-15 84.7 171 35.7
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 7.4e-15 84.7 175 38.3
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.2e-14 83.2 175 40.0
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 3.7e-14 82.4 145 38.6
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 8.2e-14 81.3 175 34.9
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 1.8e-13 80.1 175 34.3
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 2.4e-13 79.7 186 34.4
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 2.4e-13 79.7 175 37.7
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 2.4e-13 79.7 153 35.9
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 4.1e-13 79.0 175 33.1
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 6.9e-13 78.2 173 35.3
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.2e-12 77.4 168 33.3
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.5e-12 77.0 153 37.9
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 1.5e-12 77.0 182 36.3
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 2.0e-12 76.6 168 36.3
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 5.9e-12 75.1 153 37.3
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 5.9e-12 75.1 145 35.9
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 7.7e-12 74.7 166 35.5
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 1.3e-11 73.9 147 37.4
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 2.9e-11 72.8 166 39.8
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 2.9e-11 72.8 183 33.3
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 3.8e-11 72.4 148 37.8
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 1.1e-10 70.9 169 37.3
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 1.1e-10 70.9 174 31.0
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 1.4e-10 70.5 174 38.5
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.9e-10 70.1 172 34.3
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 3.2e-10 69.3 174 36.2
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 4.2e-10 68.9 128 35.2
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 5.5e-10 68.6 181 32.6
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 5.5e-10 68.6 128 35.2
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 5.5e-10 68.6 163 36.8
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 1.2e-09 67.4 187 33.2
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 1.2e-09 67.4 181 36.5
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.6e-09 67.0 173 33.5
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 1.6e-09 67.0 149 35.6
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.7e-09 66.2 172 33.1
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 3.6e-09 65.9 174 32.8
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 3.6e-09 65.9 173 32.9
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 4.7e-09 65.5 145 33.1
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 6.1e-09 65.1 160 33.1
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 6.1e-09 65.1 162 35.2
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 8.0e-09 64.7 166 36.1
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 1.8e-08 63.5 166 36.7
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 1.8e-08 63.5 149 38.3
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 2.3e-08 63.2 160 31.2
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 2.3e-08 63.2 185 31.9
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 2.3e-08 63.2 161 34.2
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 3.0e-08 62.8 170 32.4
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 3.0e-08 62.8 171 32.7
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 3.0e-08 62.8 160 38.8
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 3.9e-08 62.4 199 29.6
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 5.2e-08 62.0 199 29.6
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 6.7e-08 61.6 168 31.5
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 8.8e-08 61.2 155 31.6
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 1.1e-07 60.8 147 38.1
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 1.1e-07 60.8 171 31.0
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 1.5e-07 60.5 165 33.9
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 2.0e-07 60.1 153 33.3
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 2.6e-07 59.7 169 31.4
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 2.6e-07 59.7 181 35.9
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 3.3e-07 59.3 184 31.5
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 4.4e-07 58.9 180 31.1
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 4.4e-07 58.9 173 34.7
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 5.7e-07 58.5 173 34.1
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 7.4e-07 58.2 160 32.5
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 9.7e-07 57.8 146 30.8
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 9.7e-07 57.8 176 31.8
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.3e-06 57.4 173 34.1
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 1.3e-06 57.4 167 30.5
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 1.7e-06 57.0 188 30.3
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 1.7e-06 57.0 178 29.8
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 1.7e-06 57.0 163 30.1
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 1.7e-06 57.0 205 29.8
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.7e-06 57.0 170 34.1
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 1.7e-06 57.0 140 36.4
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 2.2e-06 56.6 182 32.4
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 2.2e-06 56.6 178 30.9
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 2.8e-06 56.2 213 27.7
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 2.8e-06 56.2 152 34.9
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 3.7e-06 55.8 146 30.1
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 3.7e-06 55.8 165 30.3
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 3.7e-06 55.8 143 34.3
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 4.8e-06 55.5 147 31.3
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 4.8e-06 55.5 158 29.7
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 4.8e-06 55.5 183 32.2
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 4.8e-06 55.5 172 30.2
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 4.8e-06 55.5 139 36.0
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 6.3e-06 55.1 157 31.2
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 6.3e-06 55.1 159 30.8
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 8.2e-06 54.7 162 29.0


User provided reference genes

Program Settings