Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI27818 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-76 288.5 141 100.0
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-18 96.7 82 54.9
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-17 93.2 84 54.8
Hma1.2p1_0067F.1_g037120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-16 90.1 77 54.5
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-16 87.8 77 49.4
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-16 87.8 77 49.4
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.2e-16 87.8 80 52.5
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-15 84.3 77 46.8
Atru.chr1.2464 Acer truncatum HOM05D000002 ORTHO05D000001 3.0e-14 82.4 80 50.0
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-13 79.7 71 54.9
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-13 79.0 79 45.6
Atru.chr2.2332 Acer truncatum HOM05D000002 ORTHO05D000001 7.4e-13 77.8 88 45.5
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-13 77.8 77 48.1
SHI29540 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-12 76.6 63 55.6
CSS0002979 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-11 73.2 80 42.5
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-11 70.9 59 52.5
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.5e-10 68.6 95 34.7
Nn1g00402 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.8e-09 65.5 116 30.2
THA.LOC104817067 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.1e-08 63.9 104 31.7
Atru.chr3.2937 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-08 63.2 108 31.5
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.5e-08 62.8 80 40.0
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.5e-08 62.8 80 40.0
Atru.chr5.2279 Acer truncatum HOM05D000002 ORTHO05D000001 3.2e-08 62.4 64 43.8
Atru.chr1.2399 Acer truncatum HOM05D000002 ORTHO05D000001 4.2e-08 62.0 60 46.7
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.2e-08 62.0 59 49.2
Hma1.2p1_0233F.1_g098110 Hydrangea macrophylla HOM05D014274 ORTHO05D024986 5.5e-08 61.6 107 33.6
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.5e-08 61.6 68 38.2
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.5e-08 61.6 108 31.5
THA.LOC109115986 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.2e-08 61.2 88 39.8
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-07 60.5 75 37.3
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.1e-07 59.7 109 31.2
THA.LOC109115967 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.7e-07 59.3 81 37.0
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.7e-07 58.5 89 31.5
Potri.019G029850 Populus trichocarpa HOM05D000002 ORTHO05D000001 4.7e-07 58.5 54 50.0
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.0e-07 57.8 61 39.3
Hma1.2p1_0700F.1_g205820 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-06 57.4 127 28.3
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-06 57.0 71 35.2
Sp4g06215 Schrenkiella parvula HOM05D000002 ORTHO05D000001 1.4e-06 57.0 70 40.0
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-06 56.2 78 32.1
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 2.3e-06 56.2 83 33.7
THA.LOC104801935 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.0e-06 55.8 78 39.7
C09p04910 Brassica napus HOM05D000984 ORTHO05D021680 4.0e-06 55.5 73 38.4
BolC9t53419H Brassica oleracea HOM05D000984 ORTHO05D021680 4.0e-06 55.5 73 38.4
Sp7g09245 Schrenkiella parvula HOM05D000002 ORTHO05D000001 4.0e-06 55.5 62 41.9
Thhalv10011941m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 5.2e-06 55.1 66 37.9
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.2e-06 55.1 90 34.4
THA.LOC104807900 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.2e-06 55.1 65 40.0
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 6.7e-06 54.7 60 46.7
COL.COLO4_38540 Corchorus olitorius HOM05D026776 ORTHO05D000001 6.7e-06 54.7 83 36.1
Hma1.2p1_0006F.1_g004720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.7e-06 54.7 75 37.3
THA.LOC104807052 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.8e-06 54.3 58 41.4
THA.LOC109116241 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.8e-06 54.3 58 41.4


User provided reference genes

Program Settings