Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI27737 Sapria himalayana HOM05D000002 ORTHO05D000047 1.5e-81 306.2 164 100.0
SEGI_21402 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.1e-23 112.1 256 37.1
SEGI_08695 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.0e-21 105.9 256 36.3
SEGI_01318 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.6e-21 104.8 250 36.4
CSS0048486 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-19 100.5 198 37.9
Hma1.2p1_0033F.1_g020960 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-19 100.5 224 35.3
SEGI_27781 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.0e-18 95.5 243 36.2
PSO210G3997 Papaver somniferum HOM05D000002 ORTHO05D000001 1.7e-16 90.1 184 35.9
CSS0002046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-14 83.2 214 32.2
CSS0017142 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-14 83.2 214 32.2
CSS0020833 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-14 82.0 69 66.7
Hma1.2p1_1591F.1_g292490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-12 75.9 76 50.0
Hma1.2p1_0281F.1_g113200 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.3e-12 75.5 76 51.3
Hma1.2p1_0915F.1_g236310 Hydrangea macrophylla HOM05D001900 ORTHO05D009822 4.3e-12 75.5 75 58.7
Rhsim07G0041000 Rhododendron simsii HOM05D000432 ORTHO05D000320 4.3e-12 75.5 88 45.5
Hma1.2p1_0401F.1_g144680 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-11 73.9 76 48.7
Oeu021690.1 Olea europaea HOM05D000002 ORTHO05D000001 1.2e-11 73.9 63 68.3
Oeu007248.1 Olea europaea HOM05D000002 ORTHO05D000001 2.1e-11 73.2 78 55.1
CSS0014458 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-11 72.4 211 30.3
SEGI_08785 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.6e-11 72.4 219 31.5
TAR406G0010 Trochodendron aralioides HOM05D000002 ORTHO05D000047 3.6e-11 72.4 76 50.0
COL.COLO4_23681 Corchorus olitorius HOM05D000002 ORTHO05D000047 6.2e-11 71.6 76 52.6
Hma1.2p1_0017F.1_g011450 Hydrangea macrophylla HOM05D000149 ORTHO05D000047 8.1e-11 71.2 76 48.7
COL.COLO4_20800 Corchorus olitorius HOM05D000002 ORTHO05D000047 1.1e-10 70.9 76 51.3
arahy.Tifrunner.gnm1.ann1.S2CMM5 Arachis hypogaea HOM05D000002 ORTHO05D000047 5.2e-10 68.6 200 33.5
MD02G1250500 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-10 68.6 76 53.9
RhsimUnG0047900 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.2e-10 68.6 68 60.3
Sabra05G0034800 Salix brachista HOM05D000002 ORTHO05D000047 6.9e-10 68.2 76 48.7
Sabra10G0088600 Salix brachista HOM05D000002 ORTHO05D000047 6.9e-10 68.2 76 48.7
Sabra11G0023800 Salix brachista HOM05D000002 ORTHO05D000047 6.9e-10 68.2 76 48.7
PSO384G2910 Papaver somniferum HOM05D000002 ORTHO05D000001 2.0e-09 66.6 70 55.7
Sabra09G0051700 Salix brachista HOM05D000002 ORTHO05D000047 2.6e-09 66.2 62 56.5
CSS0046833 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.4e-09 65.5 171 30.4
Hma1.2p1_1430F.1_g282970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.6e-09 64.7 73 45.2
PSO675G8013 Papaver somniferum HOM05D000002 ORTHO05D000047 7.6e-09 64.7 75 44.0
SEGI_38276 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.6e-09 64.7 76 47.4
TWI12G0032 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 9.9e-09 64.3 76 47.4
TAR570G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000047 9.9e-09 64.3 49 63.3
Sabra08G0045900 Salix brachista HOM05D000002 ORTHO05D000047 1.3e-08 63.9 76 48.7
Sabra16G0272300 Salix brachista HOM05D000002 ORTHO05D000047 1.3e-08 63.9 76 43.4
Sabra16G0314700 Salix brachista HOM05D000002 ORTHO05D000047 1.3e-08 63.9 76 48.7
Sabra17G0041500 Salix brachista HOM05D000002 ORTHO05D000047 1.3e-08 63.9 76 48.7
COL.COLO4_20968 Corchorus olitorius HOM05D000002 ORTHO05D000047 1.7e-08 63.5 76 43.4
Sabra09G0110300 Salix brachista HOM05D000002 ORTHO05D000047 1.7e-08 63.5 76 48.7
Hma1.2p1_0348F.1_g131690 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-08 63.2 76 44.7
Rhsim04G0133500 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.2e-08 63.2 62 62.9
RcHm_v2.0_Chr6g0298961 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-08 62.8 67 59.7
Sabra11G0091400 Salix brachista HOM05D000002 ORTHO05D000047 2.9e-08 62.8 48 58.3
TPR.G27574 Trifolium pratense HOM05D000002 ORTHO05D000047 3.8e-08 62.4 70 48.6
CANSAT78G0804 Cannabis sativa HOM05D000002 ORTHO05D000047 6.4e-08 61.6 62 48.4
RcHm_v2.0_Chr3g0451051 Rosa chinensis HOM05D000002 ORTHO05D000001 8.4e-08 61.2 68 55.9
PSO339G3906 Papaver somniferum HOM05D000002 ORTHO05D000047 1.4e-07 60.5 75 41.3
CSS0038553 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-07 60.1 181 31.5
RcHm_v2.0_Chr5g0078371 Rosa chinensis HOM05D000002 ORTHO05D000001 2.4e-07 59.7 132 35.6
arahy.Tifrunner.gnm1.ann1.U3X8MH Arachis hypogaea HOM05D000002 ORTHO05D000047 4.2e-07 58.9 140 32.1
arahy.Tifrunner.gnm1.ann1.3LWB0T Arachis hypogaea HOM05D000002 ORTHO05D000047 5.4e-07 58.5 140 32.9
arahy.Tifrunner.gnm1.ann1.Z24LQA Arachis hypogaea HOM05D000002 ORTHO05D000047 5.4e-07 58.5 140 32.9
RcHm_v2.0_Chr4g0404531 Rosa chinensis HOM05D000002 ORTHO05D000001 5.4e-07 58.5 67 55.2
RcHm_v2.0_Chr6g0303211 Rosa chinensis HOM05D000002 ORTHO05D000001 7.1e-07 58.2 67 55.2
Hma1.2p1_0802F.1_g220420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-06 57.4 76 42.1
QL03p016803 Quercus lobata HOM05D000002 ORTHO05D000047 1.2e-06 57.4 48 58.3
QL05p076832 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-06 57.0 48 56.2
RcHm_v2.0_Chr3g0450981 Rosa chinensis HOM05D000002 ORTHO05D000047 1.6e-06 57.0 59 49.2
RcHm_v2.0_Chr3g0460001 Rosa chinensis HOM05D000002 ORTHO05D000047 1.6e-06 57.0 59 49.2
Sabra15G0060700 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-06 56.6 47 53.2
CSS0020126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-06 55.8 76 40.8
Sabra06G0157700 Salix brachista HOM05D000002 ORTHO05D000047 3.5e-06 55.8 69 42.0
Sabra15G0065500 Salix brachista HOM05D000372 ORTHO05D000948 3.5e-06 55.8 69 42.0
Sabra16G0313700 Salix brachista HOM05D000002 ORTHO05D000047 4.6e-06 55.5 47 53.2
Sabra19G0019600 Salix brachista HOM05D000002 ORTHO05D000047 4.6e-06 55.5 47 53.2
arahy.Tifrunner.gnm1.ann1.L03CWL Arachis hypogaea HOM05D000002 ORTHO05D000047 6.0e-06 55.1 145 29.7
Sopen04g009510 Solanum pennellii HOM05D000014 ORTHO05D000016 6.0e-06 55.1 91 44.0


User provided reference genes

Program Settings