Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 8.4e-88 329.3 163 100.0
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 1.0e-21 109.8 159 40.9
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 1.8e-18 99.0 100 56.0
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 1.8e-18 99.0 164 38.4
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 2.4e-18 98.6 151 40.4
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 2.4e-18 98.6 151 41.1
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 4.1e-18 97.8 97 56.7
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 4.1e-18 97.8 152 42.8
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 2.0e-17 95.5 159 40.9
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.3e-16 92.0 109 48.6
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 2.3e-16 92.0 106 50.9
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 2.9e-16 91.7 159 37.7
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 3.8e-16 91.3 159 37.1
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 1.1e-15 89.7 132 42.4
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 2.5e-15 88.6 129 44.2
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.3e-15 88.2 109 48.6
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 4.2e-15 87.8 132 41.7
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 1.2e-14 86.3 61 59.0
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.2e-14 86.3 107 48.6
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.6e-14 85.9 97 51.5
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 2.1e-14 85.5 122 42.6
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 2.8e-14 85.1 90 52.2
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 3.6e-14 84.7 107 47.7
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 6.1e-14 84.0 95 48.4
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 8.9e-13 80.1 102 48.0
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 3.4e-12 78.2 113 41.6
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 4.4e-12 77.8 58 58.6
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 5.7e-12 77.4 86 50.0
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 7.5e-12 77.0 100 48.0
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 1.3e-11 76.3 103 41.7
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 1.7e-11 75.9 127 40.2
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 1.7e-11 75.9 101 47.5
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 2.2e-11 75.5 137 38.7
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 3.7e-11 74.7 113 44.2
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 3.7e-11 74.7 152 34.9
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 4.9e-11 74.3 130 39.2
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 8.3e-11 73.6 114 41.2
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 3.1e-10 71.6 107 43.9
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 7.0e-10 70.5 104 41.3
COL.COLO4_29826 Corchorus olitorius HOM05D007410 ORTHO05D009500 9.2e-10 70.1 62 48.4
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 1.2e-09 69.7 105 37.1
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 1.6e-09 69.3 92 44.6
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 1.6e-09 69.3 97 43.3
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 2.7e-09 68.6 100 42.0
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 3.5e-09 68.2 61 49.2
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 3.5e-09 68.2 55 52.7
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 4.5e-09 67.8 102 37.3
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 5.9e-09 67.4 98 44.9
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 7.8e-09 67.0 62 43.5
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 1.0e-08 66.6 61 50.8
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.3e-08 66.2 58 51.7
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 1.7e-08 65.9 148 37.8
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 1.7e-08 65.9 61 47.5
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 3.9e-08 64.7 102 39.2
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 3.9e-08 64.7 98 39.8
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 3.9e-08 64.7 50 56.0
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 3.9e-08 64.7 102 40.2
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 6.6e-08 63.9 53 50.9
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 6.6e-08 63.9 55 54.5
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 6.6e-08 63.9 55 52.7
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 8.6e-08 63.5 98 39.8
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 1.5e-07 62.8 118 35.6
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 2.5e-07 62.0 98 38.8
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 3.3e-07 61.6 100 40.0
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 3.3e-07 61.6 55 45.5
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 4.3e-07 61.2 55 49.1
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 7.3e-07 60.5 114 37.7
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 1.2e-06 59.7 55 49.1
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 2.1e-06 58.9 103 39.8
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 2.1e-06 58.9 97 42.3
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 8.0e-06 57.0 98 36.7
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 8.0e-06 57.0 105 39.0


User provided reference genes

Program Settings