Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI27136 Sapria himalayana HOM05D005377 ORTHO05D003034 2.8e-57 224.9 105 100.0
SHI35607 Sapria himalayana HOM05D000004 ORTHO05D000002 5.2e-11 71.2 62 58.1
CSS0009919 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-10 68.6 59 61.0
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 9.8e-10 67.0 61 54.1
SHI14619 Sapria himalayana HOM05D000366 ORTHO05D003034 9.8e-10 67.0 37 73.0
Ah.15g100080 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.1e-08 63.5 61 50.8
SHI42371 Sapria himalayana HOM05D000035 ORTHO05D000031 1.4e-08 63.2 33 78.8
EL10As7g23735 Beta vulgaris HOM05D000004 ORTHO05D000002 1.8e-08 62.8 61 47.5
SHI21421 Sapria himalayana HOM05D005377 ORTHO05D003034 1.8e-08 62.8 34 76.5
CSS0007734 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.1e-08 61.6 59 54.2
SHI08324 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-08 61.6 62 50.0
Ah.14g080150 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.4e-08 61.2 60 45.0
SHI48322 Sapria himalayana HOM05D000035 ORTHO05D000031 7.0e-08 60.8 32 78.1
CiPaw.04G042200 Carya illinoinensis HOM05D000004 ORTHO05D000002 1.2e-07 60.1 58 48.3
SHI05321 Sapria himalayana HOM05D005377 ORTHO05D003034 1.2e-07 60.1 35 74.3
SHI32550 Sapria himalayana HOM05D005377 ORTHO05D003034 1.2e-07 60.1 33 75.8
EL10As7g23737 Beta vulgaris HOM05D000004 ORTHO05D000002 1.6e-07 59.7 58 46.6
SHI06099 Sapria himalayana HOM05D005377 ORTHO05D003034 2.0e-07 59.3 33 75.8
SHI15141 Sapria himalayana HOM05D005377 ORTHO05D003034 2.0e-07 59.3 35 74.3
CSS0003422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-07 58.9 59 50.8
SHI20117 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.9 34 70.6
Ah.13g069290 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.5e-07 58.5 58 48.3
THA.LOC104798879 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.5e-07 58.5 58 44.8
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.5e-07 58.2 59 47.5
SHI20485 Sapria himalayana HOM05D004394 ORTHO05D005208 4.5e-07 58.2 34 67.6
SHI39362 Sapria himalayana HOM05D000035 ORTHO05D003034 4.5e-07 58.2 35 68.6
SHI09524 Sapria himalayana HOM05D005377 ORTHO05D003034 5.9e-07 57.8 33 72.7
SHI19844 Sapria himalayana HOM05D005377 ORTHO05D003034 5.9e-07 57.8 33 75.8
SHI20021 Sapria himalayana HOM05D005377 ORTHO05D003034 5.9e-07 57.8 33 69.7
A09p01570 Brassica napus HOM05D000004 ORTHO05D000002 7.7e-07 57.4 58 46.6
SHI04894 Sapria himalayana HOM05D001904 ORTHO05D001854 7.7e-07 57.4 33 72.7
SHI06197 Sapria himalayana HOM05D005377 ORTHO05D003034 7.7e-07 57.4 46 60.9
CsaV3_4G010140 Cucumis sativus L. HOM05D000004 ORTHO05D000002 1.0e-06 57.0 61 45.9
FvH4_1g29809 Fragaria vesca HOM05D000004 ORTHO05D000002 1.0e-06 57.0 59 47.5
Manes.15G121750 Manihot esculenta HOM05D000004 ORTHO05D000002 1.0e-06 57.0 58 46.6
SHI01431 Sapria himalayana HOM05D005377 ORTHO05D003034 1.0e-06 57.0 92 42.4
SHI43528 Sapria himalayana HOM05D000035 ORTHO05D000031 1.0e-06 57.0 33 72.7
ClCG10G007950 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.3e-06 56.6 61 47.5
SHI07252 Sapria himalayana HOM05D005377 ORTHO05D003034 1.3e-06 56.6 53 54.7
SHI09328 Sapria himalayana HOM05D005377 ORTHO05D003034 1.3e-06 56.6 45 60.0
SHI45895 Sapria himalayana HOM05D000035 ORTHO05D000009 1.3e-06 56.6 33 72.7
SHI25062 Sapria himalayana HOM05D005377 ORTHO05D000014 1.7e-06 56.2 33 66.7
SHI28075 Sapria himalayana HOM05D007155 ORTHO05D003034 1.7e-06 56.2 46 63.0
SHI33745 Sapria himalayana HOM05D005377 ORTHO05D003034 1.7e-06 56.2 32 71.9
SHI37914 Sapria himalayana HOM05D000035 ORTHO05D000031 1.7e-06 56.2 33 69.7
SHI43429 Sapria himalayana HOM05D005377 ORTHO05D003034 1.7e-06 56.2 33 69.7
CsaV3_1G028570 Cucumis sativus L. HOM05D000004 ORTHO05D000002 2.3e-06 55.8 61 44.3
CsaV3_1G031080 Cucumis sativus L. HOM05D000691 ORTHO05D000378 2.3e-06 55.8 61 44.3
CsaV3_5G014110 Cucumis sativus L. HOM05D003698 ORTHO05D004320 2.3e-06 55.8 61 44.3
CsaV3_6G022400 Cucumis sativus L. HOM05D001503 ORTHO05D003820 2.3e-06 55.8 61 44.3
PGR142G0242 Punica granatum HOM05D000004 ORTHO05D000002 2.9e-06 55.5 57 49.1
SHI01816 Sapria himalayana HOM05D005377 ORTHO05D003034 2.9e-06 55.5 32 75.0
SHI12130 Sapria himalayana HOM05D000105 ORTHO05D003034 2.9e-06 55.5 46 63.0
SHI18837 Sapria himalayana HOM05D000105 ORTHO05D000023 2.9e-06 55.5 33 72.7
SHI26405 Sapria himalayana HOM05D005377 ORTHO05D003034 2.9e-06 55.5 36 63.9
SHI14093 Sapria himalayana HOM05D005377 ORTHO05D003034 3.8e-06 55.1 33 72.7
SHI18529 Sapria himalayana HOM05D000316 ORTHO05D001978 3.8e-06 55.1 33 72.7
SHI31301 Sapria himalayana HOM05D000764 ORTHO05D004953 3.8e-06 55.1 35 71.4
FvH4_1g23712 Fragaria vesca HOM05D000004 ORTHO05D000002 5.0e-06 54.7 59 44.1
Manes.10G081651 Manihot esculenta HOM05D000004 ORTHO05D000002 6.6e-06 54.3 58 46.6
SHI15727 Sapria himalayana HOM05D005377 ORTHO05D000014 6.6e-06 54.3 62 50.0
SHI19021 Sapria himalayana HOM05D005377 ORTHO05D003034 6.6e-06 54.3 35 71.4
SHI32081 Sapria himalayana HOM05D005377 ORTHO05D003034 6.6e-06 54.3 33 72.7
SHI34303 Sapria himalayana HOM05D000004 ORTHO05D000002 6.6e-06 54.3 50 54.0
SHI38313 Sapria himalayana HOM05D000616 ORTHO05D000233 6.6e-06 54.3 34 67.6
SHI26426 Sapria himalayana HOM05D005377 ORTHO05D000002 8.6e-06 53.9 46 60.9


User provided reference genes

Program Settings