Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI27023 Sapria himalayana HOM05D001894 ORTHO05D001752 8.9e-107 390.2 185 100.0
Manes.06G085900 Manihot esculenta HOM05D001894 ORTHO05D001752 6.8e-14 81.6 64 54.7
Lalb_Chr07g0178281 Lupinus albus HOM05D001894 ORTHO05D001752 3.1e-11 72.8 57 57.9
Lalb_Chr13g0302921 Lupinus albus HOM05D001894 ORTHO05D001752 1.6e-10 70.5 64 50.0
QL10p019165 Quercus lobata HOM05D001894 ORTHO05D001752 2.0e-10 70.1 65 49.2
Medtr4g109420 Medicago truncatula HOM05D001894 ORTHO05D001752 2.7e-10 69.7 66 47.0
Glyma.05G022300 Glycine max HOM05D001894 ORTHO05D001752 4.5e-10 68.9 64 48.4
Prupe.5G203400 Prunus persica HOM05D001894 ORTHO05D001752 4.5e-10 68.9 63 46.0
Hma1.2p1_0060F.1_g033210 Hydrangea macrophylla HOM05D001894 ORTHO05D001752 7.7e-10 68.2 68 45.6
Phvul.009G193100 Phaseolus vulgaris HOM05D001894 ORTHO05D001752 7.7e-10 68.2 64 46.9
VMungo1215G1196 Vigna mungo HOM05D001894 ORTHO05D001752 7.7e-10 68.2 64 48.4
Phvul.003G185600 Phaseolus vulgaris HOM05D001894 ORTHO05D001752 1.0e-09 67.8 64 48.4
Psat4g047960 Pisum sativum HOM05D001894 ORTHO05D001752 1.0e-09 67.8 74 40.5
Ca_21784_v3 Cicer arietinum L. HOM05D001894 ORTHO05D001752 1.3e-09 67.4 64 46.9
Glyma.04G163600 Glycine max HOM05D001894 ORTHO05D001752 1.3e-09 67.4 64 46.9
Glyma.06G202000 Glycine max HOM05D001894 ORTHO05D001752 1.3e-09 67.4 64 46.9
Hma1.2p1_0322F.1_g124800 Hydrangea macrophylla HOM05D001894 ORTHO05D001752 1.3e-09 67.4 65 47.7
TPR.G2049 Trifolium pratense HOM05D001894 ORTHO05D001752 1.3e-09 67.4 67 44.8
Glyma.17G077400 Glycine max HOM05D001894 ORTHO05D001752 1.7e-09 67.0 64 48.4
PSO017G2493 Papaver somniferum HOM05D001894 ORTHO05D001752 2.9e-09 66.2 66 47.0
Cpa.g.sc656.1 Carica papaya HOM05D001894 ORTHO05D001752 3.8e-09 65.9 64 42.2
Lalb_Chr12g0197101 Lupinus albus HOM05D001894 ORTHO05D001752 3.8e-09 65.9 64 45.3
Atru.chr9.413 Acer truncatum HOM05D001894 ORTHO05D001752 5.0e-09 65.5 64 46.9
Duzib205G0371 Durio zibethinus HOM05D001894 ORTHO05D001752 5.0e-09 65.5 57 50.9
arahy.Tifrunner.gnm1.ann1.URK1K5 Arachis hypogaea HOM05D001894 ORTHO05D001752 6.5e-09 65.1 64 45.3
ClCG04G011900 Citrullus lanatus HOM05D001894 ORTHO05D001752 6.5e-09 65.1 67 46.3
MELO3C002018.2 Cucumis melo HOM05D001894 ORTHO05D001752 6.5e-09 65.1 67 46.3
CsaV3_1G005880 Cucumis sativus L. HOM05D001894 ORTHO05D002926 6.5e-09 65.1 67 46.3
arahy.Tifrunner.gnm1.ann1.ZWJH5S Arachis hypogaea HOM05D001894 ORTHO05D001752 8.6e-09 64.7 64 45.3
Manes.14G084600 Manihot esculenta HOM05D001894 ORTHO05D001752 8.6e-09 64.7 64 45.3
Sed0020614 Sechium edule HOM05D001894 ORTHO05D001752 8.6e-09 64.7 67 46.3
TAR622G0180 Trochodendron aralioides HOM05D001894 ORTHO05D001752 8.6e-09 64.7 70 44.3
Lj5C104T5 Lonicera japonica HOM05D001894 ORTHO05D001752 1.1e-08 64.3 48 56.2
RcHm_v2.0_Chr7g0182781 Rosa chinensis HOM05D001894 ORTHO05D001752 1.1e-08 64.3 60 50.0
Cpa.g.sc94.26 Carica papaya HOM05D001894 ORTHO05D001752 1.5e-08 63.9 64 45.3
Nn4g23398 Nelumbo nucifera HOM05D001894 ORTHO05D001752 1.9e-08 63.5 71 43.7
Nitab4.5_0011867g0010 Nicotiana tabacum HOM05D001894 ORTHO05D001752 1.9e-08 63.5 65 44.6
Psat5g201960 Pisum sativum HOM05D001894 ORTHO05D001752 1.9e-08 63.5 64 43.8
Potri.012G061400 Populus trichocarpa HOM05D001894 ORTHO05D001752 1.9e-08 63.5 82 42.7
Lj4g0026422 Lotus japonicus HOM05D001894 ORTHO05D001752 2.5e-08 63.2 57 50.9
Ciclev10018461m.g Citrus clementina HOM05D001894 ORTHO05D001752 3.2e-08 62.8 65 46.2
Gohir.D11G036900 Gossypium hirsutum HOM05D001894 ORTHO05D001752 3.2e-08 62.8 57 50.9
Gorai.007G039700 Gossypium raimondii HOM05D001894 ORTHO05D001752 3.2e-08 62.8 57 50.9
MD14G1210400 Malus domestica HOM05D001894 ORTHO05D001752 3.2e-08 62.8 63 44.4
Potri.015G056400 Populus trichocarpa HOM05D001894 ORTHO05D001752 3.2e-08 62.8 65 46.2
SGA_v2.0_scaffold114G31926 Striga asiatica HOM05D001894 ORTHO05D001752 3.2e-08 62.8 64 46.9
GSVIVG01007885001 Vitis vinifera HOM05D001894 ORTHO05D001752 3.2e-08 62.8 63 42.9
MD06G1200700 Malus domestica HOM05D001894 ORTHO05D001752 4.2e-08 62.4 60 48.3
Sed0001778 Sechium edule HOM05D001894 ORTHO05D001752 4.2e-08 62.4 65 43.1
VMungo1309G0348 Vigna mungo HOM05D001894 ORTHO05D001752 4.2e-08 62.4 65 44.6
FvH4_5g14040 Fragaria vesca HOM05D001894 ORTHO05D001752 5.5e-08 62.0 60 48.3
FAN18G3960 Fragaria x ananassa HOM05D001894 ORTHO05D001752 5.5e-08 62.0 60 48.3
FAN08G3261 Fragaria x ananassa HOM05D001894 ORTHO05D001752 7.2e-08 61.6 60 48.3
Nitab4.5_0003660g0040 Nicotiana tabacum HOM05D001894 ORTHO05D001752 7.2e-08 61.6 65 43.1
Peaxi162Scf00702g00048 Petunia axillaris HOM05D001894 ORTHO05D001752 7.2e-08 61.6 69 43.5
Thecc.03G099600 Theobroma cacao HOM05D001894 ORTHO05D001752 7.2e-08 61.6 57 49.1
Haze_07702 Corylus avellana HOM05D001894 ORTHO05D001752 9.5e-08 61.2 115 33.0
Lj1g0009803 Lotus japonicus HOM05D001894 ORTHO05D001752 9.5e-08 61.2 71 42.3
TPR.G12144 Trifolium pratense HOM05D001894 ORTHO05D001752 9.5e-08 61.2 64 43.8
Gohir.A11G033500 Gossypium hirsutum HOM05D001894 ORTHO05D001752 1.2e-07 60.8 57 49.1
Duzib084G0585 Durio zibethinus HOM05D001894 ORTHO05D001752 1.6e-07 60.5 67 44.8
Hund09881 Selenicereus undatus HOM05D001894 ORTHO05D001752 1.6e-07 60.5 60 43.3
Cc04_g13200 Coffea canephora HOM05D001894 ORTHO05D001752 2.1e-07 60.1 67 41.8
Nitab4.5_0001485g0190 Nicotiana tabacum HOM05D001894 ORTHO05D001752 2.1e-07 60.1 66 45.5
Cfa019314 Carpinus fangiana HOM05D001894 ORTHO05D001752 2.8e-07 59.7 64 40.6
FAN13G2812 Fragaria x ananassa HOM05D001894 ORTHO05D001752 3.6e-07 59.3 60 46.7
Dinv10522 Davidia involucrata HOM05D001894 ORTHO05D001752 6.1e-07 58.5 46 54.3
Gohir.D11G036500 Gossypium hirsutum HOM05D001894 ORTHO05D001752 6.1e-07 58.5 57 45.6
Gorai.007G039300 Gossypium raimondii HOM05D001894 ORTHO05D001752 6.1e-07 58.5 57 45.6
CSS0001605 Camellia sinensis var. sinensis HOM05D001894 ORTHO05D001752 8.0e-07 58.2 48 54.2
TAR371G0849 Trochodendron aralioides HOM05D001894 ORTHO05D001752 8.0e-07 58.2 66 42.4
CiPaw.11G051700 Carya illinoinensis HOM05D001894 ORTHO05D001752 1.0e-06 57.8 64 43.8
Gohir.D09G244000 Gossypium hirsutum HOM05D001894 ORTHO05D001752 1.0e-06 57.8 57 47.4
Gorai.006G268000 Gossypium raimondii HOM05D001894 ORTHO05D001752 1.0e-06 57.8 57 47.4
Medtr3g024330 Medicago truncatula HOM05D001894 ORTHO05D001752 1.0e-06 57.8 64 40.6
Peaxi162Scf00201g00131 Petunia axillaris HOM05D001894 ORTHO05D001752 1.0e-06 57.8 66 42.4
Sc10g0009740 Simmondsia chinensis HOM05D001894 ORTHO05D001752 1.0e-06 57.8 63 42.9
Duzib068G1120 Durio zibethinus HOM05D001894 ORTHO05D001752 1.4e-06 57.4 57 45.6
CiPaw.12G007900 Carya illinoinensis HOM05D001894 ORTHO05D001752 1.8e-06 57.0 64 40.6
Thhalv10012434m.g Eutrema salsugineum HOM05D001894 ORTHO05D001752 1.8e-06 57.0 65 43.1
SGA_v2.0_scaffold7G04035 Striga asiatica HOM05D001894 ORTHO05D001752 2.3e-06 56.6 65 43.1
AL6G18320 Arabidopsis lyrata HOM05D001894 ORTHO05D001752 3.0e-06 56.2 64 43.8
Lsat_1_v5_gn_5_23200 Lactuca sativa HOM05D001894 ORTHO05D001752 3.0e-06 56.2 43 60.5
Solyc12g038490.2 Solanum lycopersicum HOM05D001894 ORTHO05D001752 3.0e-06 56.2 64 42.2
Sopen12g018730 Solanum pennellii HOM05D001894 ORTHO05D001752 3.0e-06 56.2 64 42.2
Gohir.D03G096000 Gossypium hirsutum HOM05D001894 ORTHO05D001752 4.0e-06 55.8 57 45.6
Gorai.003G100700 Gossypium raimondii HOM05D001894 ORTHO05D001752 4.0e-06 55.8 57 45.6
Actinidia04836 Actinidia chinensis HOM05D001894 ORTHO05D001752 5.2e-06 55.5 66 45.5
CANSAT80G0157 Cannabis sativa HOM05D001894 ORTHO05D001752 5.2e-06 55.5 64 42.2
Migut.D01693 Erythranthe guttata HOM05D001894 ORTHO05D001752 5.2e-06 55.5 44 56.8
SalBow7G0716 Salvia bowleyana HOM05D001894 ORTHO05D001752 5.2e-06 55.5 48 52.1
Eucgr.K02518 Eucalyptus grandis HOM05D001894 ORTHO05D001752 6.8e-06 55.1 64 43.8
vmacro16505 Vaccinium macrocarpon HOM05D001894 ORTHO05D001752 6.8e-06 55.1 67 37.3
CAN.G479.18 Capsicum annuum HOM05D001894 ORTHO05D001752 8.8e-06 54.7 64 42.2
Nitab4.5_0016107g0010 Nicotiana tabacum HOM05D001894 ORTHO05D001752 8.8e-06 54.7 66 42.4


User provided reference genes

Program Settings