Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26996 Sapria himalayana HOM05D000113 ORTHO05D368983 8.4e-35 149.8 77 100.0
Duzib205G1857 Durio zibethinus HOM05D000113 ORTHO05D002571 3.0e-08 61.6 48 62.5
CiPaw.11G050600 Carya illinoinensis HOM05D000113 ORTHO05D002571 5.1e-08 60.8 47 61.7
Phvul.009G193400 Phaseolus vulgaris HOM05D000113 ORTHO05D002571 6.7e-08 60.5 45 64.4
VMungo1127G1561 Vigna mungo HOM05D000113 ORTHO05D002571 6.7e-08 60.5 48 60.4
CDE02G1559 Ceratophyllum demersum HOM05D000113 ORTHO05D002571 8.8e-08 60.1 71 50.7
Lj6g0016007 Lotus japonicus HOM05D000113 ORTHO05D002571 8.8e-08 60.1 47 59.6
Eucgr.K02505 Eucalyptus grandis HOM05D000113 ORTHO05D002571 1.1e-07 59.7 45 62.2
Thecc.03G097900 Theobroma cacao HOM05D000113 ORTHO05D002571 1.1e-07 59.7 57 57.9
Manes.13G073000 Manihot esculenta HOM05D000113 ORTHO05D002571 1.5e-07 59.3 57 56.1
Nn2g13470 Nelumbo nucifera HOM05D000113 ORTHO05D002571 1.5e-07 59.3 47 61.7
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 2.0e-07 58.9 58 50.0
Cc04_g15020 Coffea canephora HOM05D000113 ORTHO05D002571 2.6e-07 58.5 57 56.1
COL.COLO4_22215 Corchorus olitorius HOM05D000113 ORTHO05D002571 2.6e-07 58.5 57 56.1
Haze_07691 Corylus avellana HOM05D000113 ORTHO05D002571 2.6e-07 58.5 47 57.4
Gohir.A12G181200 Gossypium hirsutum HOM05D000113 ORTHO05D002571 2.6e-07 58.5 57 56.1
Gohir.D12G183900 Gossypium hirsutum HOM05D000113 ORTHO05D002571 2.6e-07 58.5 57 56.1
Gorai.008G197200 Gossypium raimondii HOM05D000113 ORTHO05D002571 2.6e-07 58.5 57 56.1
Nitab4.5_0004284g0070 Nicotiana tabacum HOM05D000113 ORTHO05D002571 2.6e-07 58.5 57 56.1
Cfa019308 Carpinus fangiana HOM05D000113 ORTHO05D002571 5.7e-07 57.4 57 54.4
Glyma.06G201700 Glycine max HOM05D000113 ORTHO05D002571 5.7e-07 57.4 47 61.7
CAN.G479.25 Capsicum annuum HOM05D000113 ORTHO05D002571 7.4e-07 57.0 45 60.0
Prupe.5G201700 Prunus persica HOM05D000113 ORTHO05D002571 7.4e-07 57.0 47 59.6
MD06G1200100 Malus domestica HOM05D000113 ORTHO05D002571 9.7e-07 56.6 57 56.1
unitig_8.g2956 Utricularia gibba HOM05D000113 ORTHO05D002571 9.7e-07 56.6 58 53.4
Aqoxy3G03585 Aquilegia oxysepala HOM05D000113 ORTHO05D002571 1.3e-06 56.2 47 57.4
Peaxi162Scf00201g00132 Petunia axillaris HOM05D000113 ORTHO05D002571 1.3e-06 56.2 57 54.4
MELO3C017216.2 Cucumis melo HOM05D000113 ORTHO05D002571 1.7e-06 55.8 57 54.4
CsaV3_1G002800 Cucumis sativus L. HOM05D000113 ORTHO05D002571 1.7e-06 55.8 57 54.4
Migut.D01678 Erythranthe guttata HOM05D000113 ORTHO05D002571 1.7e-06 55.8 57 54.4
Prupe.6G159800 Prunus persica HOM05D000113 ORTHO05D002571 1.7e-06 55.8 57 56.1
QL10p018828 Quercus lobata HOM05D000113 ORTHO05D002571 1.7e-06 55.8 47 55.3
HPP92_010044 Vanilla planifolia HOM05D000113 ORTHO05D002571 1.7e-06 55.8 45 60.0
TAR374G0746 Trochodendron aralioides HOM05D000113 ORTHO05D002571 2.2e-06 55.5 45 60.0
GSVIVG01007911001 Vitis vinifera HOM05D000113 ORTHO05D002571 2.2e-06 55.5 47 63.8
Actinidia19008 Actinidia chinensis HOM05D000113 ORTHO05D002571 2.8e-06 55.1 57 56.1
Dinv38794 Davidia involucrata HOM05D000113 ORTHO05D002571 2.8e-06 55.1 47 57.4
Hma1.2p1_0060F.1_g033270 Hydrangea macrophylla HOM05D000113 ORTHO05D002571 2.8e-06 55.1 57 54.4
SGA_v2.0_scaffold7G04034 Striga asiatica HOM05D000113 ORTHO05D002571 2.8e-06 55.1 57 52.6
Sed0009402 Sechium edule HOM05D000113 ORTHO05D002571 3.7e-06 54.7 57 52.6
SalBow7G4123 Salvia bowleyana HOM05D000113 ORTHO05D002571 4.8e-06 54.3 57 52.6
Solyc03g115390.4 Solanum lycopersicum HOM05D000113 ORTHO05D002571 4.8e-06 54.3 57 52.6
Sopen03g034400 Solanum pennellii HOM05D000113 ORTHO05D002571 4.8e-06 54.3 57 52.6
PGSC0003DMG402024649 Solanum tuberosum HOM05D000113 ORTHO05D002571 4.8e-06 54.3 57 52.6
Actinidia35027 Actinidia chinensis HOM05D000113 ORTHO05D002571 6.3e-06 53.9 57 54.4
arahy.Tifrunner.gnm1.ann1.LUB4JJ Arachis hypogaea HOM05D000113 ORTHO05D002571 6.3e-06 53.9 57 52.6
arahy.Tifrunner.gnm1.ann1.U2PNLV Arachis hypogaea HOM05D000113 ORTHO05D002571 6.3e-06 53.9 57 52.6
Lalb_Chr13g0294241 Lupinus albus HOM05D000113 ORTHO05D002571 6.3e-06 53.9 57 52.6
Medtr3g023880 Medicago truncatula HOM05D000113 ORTHO05D002571 6.3e-06 53.9 57 52.6
Psat0s3790g0040 Pisum sativum HOM05D000113 ORTHO05D002571 6.3e-06 53.9 45 57.8
Rhsim12G0152100 Rhododendron simsii HOM05D000113 ORTHO05D002571 6.3e-06 53.9 45 57.8
Lsat_1_v5_gn_6_69341 Lactuca sativa HOM05D000113 ORTHO05D002571 8.2e-06 53.5 45 57.8
Lj5C105T19 Lonicera japonica HOM05D000113 ORTHO05D002571 8.2e-06 53.5 47 55.3
THA.LOC104812747 Tarenaya hassleriana HOM05D000113 ORTHO05D002571 8.2e-06 53.5 45 57.8


User provided reference genes

Program Settings