Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26978 Sapria himalayana HOM05D000759 ORTHO05D000574 8.2e-220 767.3 565 100.0
Prupe.5G198900 Prunus persica HOM05D000759 ORTHO05D000574 7.3e-43 179.5 271 46.1
Sabra15G0086200 Salix brachista HOM05D000759 ORTHO05D000574 2.1e-42 177.9 375 40.5
CsaV3_1G002600 Cucumis sativus L. HOM05D000759 ORTHO05D000574 2.8e-42 177.6 262 47.3
Potri.015G061001 Populus trichocarpa HOM05D000759 ORTHO05D000574 4.7e-42 176.8 271 43.5
MELO3C017195.2 Cucumis melo HOM05D000759 ORTHO05D000574 4.0e-41 173.7 263 47.1
Manes.06G089100 Manihot esculenta HOM05D000759 ORTHO05D000574 4.4e-40 170.2 263 47.1
ClCG06G015960 Citrullus lanatus HOM05D000759 ORTHO05D000574 9.8e-40 169.1 266 47.0
RcHm_v2.0_Chr7g0182171 Rosa chinensis HOM05D000759 ORTHO05D000574 2.2e-39 167.9 268 44.4
Manes.14G082200 Manihot esculenta HOM05D000759 ORTHO05D000574 3.2e-38 164.1 265 45.3
MD06G1198000 Malus domestica HOM05D000759 ORTHO05D000574 7.0e-38 162.9 265 45.3
Potri.012G067900 Populus trichocarpa HOM05D000759 ORTHO05D000574 9.2e-38 162.5 270 41.9
CiPaw.12G011600 Carya illinoinensis HOM05D000759 ORTHO05D000574 4.6e-37 160.2 259 46.3
FvH4_5g14490 Fragaria vesca HOM05D000759 ORTHO05D000574 2.5e-35 154.5 268 43.3
FAN08G1273 Fragaria x ananassa HOM05D000759 ORTHO05D000574 2.5e-35 154.5 268 43.3
FAN18G0748 Fragaria x ananassa HOM05D000759 ORTHO05D000574 2.5e-35 154.5 268 43.3
FAN13G0011 Fragaria x ananassa HOM05D000759 ORTHO05D000574 6.2e-34 149.8 268 42.5
Atru.chr9.324 Acer truncatum HOM05D000759 ORTHO05D000574 3.1e-33 147.5 262 43.9
COL.COLO4_36430 Corchorus olitorius HOM05D000759 ORTHO05D000574 4.0e-33 147.1 276 39.9
Gohir.A12G179700 Gossypium hirsutum HOM05D000759 ORTHO05D000574 5.8e-32 143.3 262 43.5
Gohir.D12G182300 Gossypium hirsutum HOM05D000759 ORTHO05D000574 1.7e-31 141.7 260 43.1
Thecc.03G094800 Theobroma cacao HOM05D000759 ORTHO05D000574 2.2e-31 141.4 271 41.3
PGR083G1826 Punica granatum HOM05D000759 ORTHO05D000574 3.7e-31 140.6 260 41.5
Sed0009694 Sechium edule HOM05D000759 ORTHO05D000574 3.7e-31 140.6 397 34.8
Gorai.008G195600 Gossypium raimondii HOM05D000759 ORTHO05D000574 1.4e-30 138.7 260 42.7
TWI60G0633 Tripterygium wilfordii HOM05D000759 ORTHO05D000574 2.7e-29 134.4 274 40.1
TAR629G1202 Trochodendron aralioides HOM05D000759 ORTHO05D000574 2.7e-29 134.4 258 38.8
Eucgr.B00550 Eucalyptus grandis HOM05D000759 ORTHO05D000574 4.6e-29 133.7 272 34.9
Gohir.A07G070200 Gossypium hirsutum HOM05D000759 ORTHO05D000574 1.7e-28 131.7 257 38.5
Sed0002250 Sechium edule HOM05D000759 ORTHO05D000574 3.9e-28 130.6 377 30.0
GSVIVG01007958001 Vitis vinifera HOM05D000759 ORTHO05D000574 5.1e-28 130.2 253 39.1
QL10p017923 Quercus lobata HOM05D000759 ORTHO05D000574 8.6e-28 129.4 272 39.0
TWI81G0606 Tripterygium wilfordii HOM05D000759 ORTHO05D000574 1.1e-27 129.0 261 42.1
CiPaw.11G047900 Carya illinoinensis HOM05D000759 ORTHO05D000574 3.3e-27 127.5 272 39.7
Cc04_g14340 Coffea canephora HOM05D000759 ORTHO05D000574 3.3e-27 127.5 247 35.2
Duzib068G0582 Durio zibethinus HOM05D000759 ORTHO05D000574 7.3e-27 126.3 286 34.6
CSS0013752 Camellia sinensis var. sinensis HOM05D000759 ORTHO05D000574 2.1e-26 124.8 268 36.9
Rhsim08G0150800 Rhododendron simsii HOM05D000759 ORTHO05D000574 3.6e-26 124.0 243 36.6
Duzib205G1063 Durio zibethinus HOM05D000759 ORTHO05D000574 4.7e-26 123.6 286 35.3
Peaxi162Scf00274g00115 Petunia axillaris HOM05D000759 ORTHO05D000574 6.2e-26 123.2 400 31.5
CANSAT80G2621 Cannabis sativa HOM05D000759 ORTHO05D000574 8.1e-26 122.9 283 39.6
Sopen03g034660 Solanum pennellii HOM05D000759 ORTHO05D000574 4.0e-25 120.6 248 34.7
Actinidia35013 Actinidia chinensis HOM05D000759 ORTHO05D000574 5.2e-25 120.2 284 32.4
vmacro17576 Vaccinium macrocarpon HOM05D000759 ORTHO05D000574 5.2e-25 120.2 244 36.5
Gohir.D07G074800 Gossypium hirsutum HOM05D000759 ORTHO05D000574 1.5e-24 118.6 287 35.2
Gorai.001G078900 Gossypium raimondii HOM05D000759 ORTHO05D000574 1.5e-24 118.6 287 34.8
THA.LOC104818325 Tarenaya hassleriana HOM05D000759 ORTHO05D000574 2.6e-24 117.9 247 38.5
Oeu016159.1 Olea europaea HOM05D000759 ORTHO05D000574 3.4e-24 117.5 256 34.8
Dinv10662 Davidia involucrata HOM05D000759 ORTHO05D000574 4.4e-24 117.1 263 38.0
Peaxi162Scf00013g00441 Petunia axillaris HOM05D000759 ORTHO05D000574 2.9e-23 114.4 268 34.0
vmacro16522 Vaccinium macrocarpon HOM05D000759 ORTHO05D000574 4.9e-23 113.6 253 36.4
Nitab4.5_0003021g0080 Nicotiana tabacum HOM05D000759 ORTHO05D000574 8.4e-23 112.8 254 36.2
TAR371G1145 Trochodendron aralioides HOM05D000759 ORTHO05D000574 1.1e-22 112.5 273 34.4
Nitab4.5_0004771g0040 Nicotiana tabacum HOM05D000759 ORTHO05D000574 1.4e-22 112.1 247 35.6
Dinv38752 Davidia involucrata HOM05D000759 ORTHO05D000574 2.4e-22 111.3 350 28.9
Oeu046996.2 Olea europaea HOM05D000759 ORTHO05D000574 5.4e-22 110.2 260 33.8
Lalb_Chr12g0197011 Lupinus albus HOM05D000759 ORTHO05D000574 1.6e-21 108.6 277 33.6
Sopen06g026970 Solanum pennellii HOM05D000759 ORTHO05D000574 1.6e-21 108.6 247 32.8
unitig_26.g9656 Utricularia gibba HOM05D000759 ORTHO05D000574 2.1e-21 108.2 256 32.4
Sed0024447 Sechium edule HOM05D000759 ORTHO05D000574 2.7e-21 107.8 259 39.0
MD14G1205600 Malus domestica HOM05D000759 ORTHO05D000574 1.0e-20 105.9 265 36.6
ClCG04G012060 Citrullus lanatus HOM05D000759 ORTHO05D000574 1.3e-20 105.5 258 39.5
TPR.G2022 Trifolium pratense HOM05D000759 ORTHO05D000574 3.0e-20 104.4 271 36.2
CsaV3_1G005710 Cucumis sativus L. HOM05D000759 ORTHO05D000574 5.1e-20 103.6 264 37.5
Medtr3g037080 Medicago truncatula HOM05D000759 ORTHO05D000574 6.6e-20 103.2 252 34.9
VMungo1215G1505 Vigna mungo HOM05D000759 ORTHO05D000574 1.1e-19 102.4 266 35.3
DCAR_021515 Daucus carota HOM05D000759 ORTHO05D000574 3.3e-19 100.9 299 28.4
CAN.G587.13 Capsicum annuum HOM05D000759 ORTHO05D000574 9.6e-19 99.4 247 32.4
Haze_07655 Corylus avellana HOM05D000759 ORTHO05D000574 2.1e-18 98.2 271 32.8
Sc04g0002910 Simmondsia chinensis HOM05D000759 ORTHO05D000574 3.6e-18 97.4 295 29.5
Hund09831 Selenicereus undatus HOM05D000759 ORTHO05D000574 6.2e-18 96.7 297 30.3
Gohir.D11G035800 Gossypium hirsutum HOM05D000759 ORTHO05D000574 2.4e-17 94.7 327 32.4
Nitab4.5_0007136g0010 Nicotiana tabacum HOM05D000759 ORTHO05D000574 3.1e-17 94.4 249 33.3
Solyc03g115680.4 Solanum lycopersicum HOM05D000759 ORTHO05D000574 4.0e-17 94.0 197 34.0
Nitab4.5_0001997g0040 Nicotiana tabacum HOM05D000759 ORTHO05D000574 1.2e-16 92.4 248 34.3
Gorai.007G038600 Gossypium raimondii HOM05D000759 ORTHO05D000574 1.5e-16 92.0 327 32.1
SGA_v2.0_scaffold25G10937 Striga asiatica HOM05D000759 ORTHO05D000574 2.0e-16 91.7 253 31.2
MELO3C002002.2 Cucumis melo HOM05D000759 ORTHO05D000574 4.4e-16 90.5 262 36.6
Glyma.06G196800 Glycine max HOM05D000759 ORTHO05D000574 5.8e-16 90.1 252 32.1
Glyma.05G024500 Glycine max HOM05D000759 ORTHO05D000574 7.6e-16 89.7 266 33.5
Gohir.A11G032550 Gossypium hirsutum HOM05D000759 ORTHO05D000574 9.9e-16 89.4 327 31.5
Glyma.04G165700 Glycine max HOM05D000759 ORTHO05D000574 1.3e-15 89.0 255 33.7
SGA_v2.0_scaffold313G48323 Striga asiatica HOM05D000759 ORTHO05D000574 1.3e-15 89.0 256 28.9
Migut.L00327 Erythranthe guttata HOM05D000759 ORTHO05D000574 1.7e-15 88.6 313 29.4
Glyma.17G102800 Glycine max HOM05D000759 ORTHO05D000574 1.7e-15 88.6 270 32.6
C02p03270 Brassica napus HOM05D000759 ORTHO05D000574 2.2e-15 88.2 253 32.4
BraA02t04931Z Brassica rapa HOM05D000759 ORTHO05D000574 4.9e-15 87.0 249 31.3
Phvul.009G184800 Phaseolus vulgaris HOM05D000759 ORTHO05D000574 8.4e-15 86.3 264 30.3
arahy.Tifrunner.gnm1.ann1.6R56IB Arachis hypogaea HOM05D000759 ORTHO05D000574 1.4e-14 85.5 95 49.5
arahy.Tifrunner.gnm1.ann1.PTH5J3 Arachis hypogaea HOM05D000759 ORTHO05D000574 1.4e-14 85.5 95 49.5
Solyc06g069670.4 Solanum lycopersicum HOM05D000759 ORTHO05D000574 1.4e-14 85.5 205 31.2
BolC2t06291H Brassica oleracea HOM05D000759 ORTHO05D000574 1.9e-14 85.1 258 32.2
Lj5C107G10 Lonicera japonica HOM05D000759 ORTHO05D000574 1.9e-14 85.1 117 41.0
Ah.11g048170 Amaranthus hybridus HOM05D000759 ORTHO05D000574 2.4e-14 84.7 296 31.4
AUR62021624 Chenopodium quinoa HOM05D000759 ORTHO05D000574 3.2e-14 84.3 304 28.0
Hma1.2p1_0322F.1_g125000 Hydrangea macrophylla HOM05D000759 ORTHO05D000574 9.3e-14 82.8 140 40.0
Lalb_Chr13g0303061 Lupinus albus HOM05D000759 ORTHO05D000574 1.6e-13 82.0 268 30.6
AUR62008469 Chenopodium quinoa HOM05D000759 ORTHO05D000574 2.1e-13 81.6 305 28.5
Hund02621 Selenicereus undatus HOM05D000759 ORTHO05D000574 2.7e-13 81.3 303 33.0
CSS0016396 Camellia sinensis var. sinensis HOM05D000759 ORTHO05D000574 3.5e-13 80.9 139 38.8
Rhsim12G0153600 Rhododendron simsii HOM05D000759 ORTHO05D000574 4.6e-13 80.5 259 30.5
Cfa019279 Carpinus fangiana HOM05D000759 ORTHO05D000574 1.3e-12 79.0 262 34.4
Lj4g0014059 Lotus japonicus HOM05D000759 ORTHO05D000574 2.3e-12 78.2 263 31.6
EL10Ac2g03145 Beta vulgaris HOM05D000759 ORTHO05D000574 5.1e-12 77.0 298 31.5
Psat4g049080 Pisum sativum HOM05D000759 ORTHO05D000574 8.7e-12 76.3 282 31.6
AT5G07740 Arabidopsis thaliana HOM05D000759 ORTHO05D000574 1.5e-11 75.5 252 33.7
VMungo1309G0901 Vigna mungo HOM05D000759 ORTHO05D000574 1.5e-11 75.5 259 32.0
MSTRG.22995 Avicennia marina HOM05D000759 ORTHO05D000574 1.9e-11 75.1 237 28.3
DCAR_032308 Daucus carota HOM05D000759 ORTHO05D000574 3.3e-11 74.3 244 28.3
DCAR_016584 Daucus carota HOM05D000759 ORTHO05D000574 4.3e-11 73.9 288 27.4
HanXRQChr16g0502601 Helianthus annuus HOM05D000759 ORTHO05D000574 9.6e-11 72.8 236 29.7
Peaxi162Scf00106g00433 Petunia axillaris HOM05D000759 ORTHO05D000574 9.6e-11 72.8 241 28.6
BraA03t09695Z Brassica rapa HOM05D000759 ORTHO05D000574 1.6e-10 72.0 251 33.5
Lj1g0002828 Lotus japonicus HOM05D000759 ORTHO05D000574 2.1e-10 71.6 277 30.0
HanXRQChr09g0270941 Helianthus annuus HOM05D000759 ORTHO05D000574 3.6e-10 70.9 259 30.5
unitig_0.g769 Utricularia gibba HOM05D000759 ORTHO05D000574 4.8e-10 70.5 240 28.8
Medtr4g109040 Medicago truncatula HOM05D000759 ORTHO05D000574 6.2e-10 70.1 257 29.6
Psat5g199320 Pisum sativum HOM05D000759 ORTHO05D000574 6.2e-10 70.1 350 28.6
Thhalv10016030m.g Eutrema salsugineum HOM05D000759 ORTHO05D000574 3.1e-09 67.8 254 31.9
Aa31LG3G18700 Aethionema arabicum HOM05D000759 ORTHO05D000574 6.9e-09 66.6 252 31.7
ECA232G3062 Erigeron canadensis HOM05D000759 ORTHO05D000574 1.2e-08 65.9 254 30.3
AL6G18110 Arabidopsis lyrata HOM05D000759 ORTHO05D000574 1.5e-08 65.5 258 33.7
A03p03450 Brassica napus HOM05D000759 ORTHO05D000574 3.4e-08 64.3 248 31.9
BolC3t12924H Brassica oleracea HOM05D000759 ORTHO05D000574 4.5e-08 63.9 248 31.5
CDE06G0027 Ceratophyllum demersum HOM05D000759 ORTHO05D000574 9.9e-08 62.8 203 33.5
Migut.I00219 Erythranthe guttata HOM05D000759 ORTHO05D000574 9.9e-08 62.8 96 41.7
Lalb_Chr08g0235421 Lupinus albus HOM05D000759 ORTHO05D000574 1.3e-07 62.4 270 29.6
Lsat_1_v5_gn_5_21621 Lactuca sativa HOM05D000759 ORTHO05D000574 1.7e-07 62.0 250 27.6
BcaB01g06056 Brassica carinata HOM05D000759 ORTHO05D000574 2.9e-07 61.2 322 29.8
C03p03870 Brassica napus HOM05D000759 ORTHO05D000574 2.9e-07 61.2 322 29.8
Actinidia37606 Actinidia chinensis HOM05D000759 ORTHO05D000574 3.8e-07 60.8 173 30.6
HanXRQChr10g0318541 Helianthus annuus HOM05D000759 ORTHO05D000574 4.9e-07 60.5 373 28.2
Sp6g35160 Schrenkiella parvula HOM05D000759 ORTHO05D000574 6.4e-07 60.1 321 30.8
BcaB05g21599 Brassica carinata HOM05D000759 ORTHO05D000574 1.1e-06 59.3 253 30.8
Hma1.2p1_0060F.1_g033450 Hydrangea macrophylla HOM05D000759 ORTHO05D000574 1.4e-06 58.9 92 41.3
ATR0730G207 Amborella trichopoda HOM05D000759 ORTHO05D000574 1.9e-06 58.5 73 42.5
Carub.0006s0670 Capsella rubella HOM05D000759 ORTHO05D000574 1.9e-06 58.5 353 28.0
Ciclev10018877m.g Citrus clementina HOM05D000759 ORTHO05D000574 1.9e-06 58.5 88 46.6
Gohir.A09G242700 Gossypium hirsutum HOM05D000759 ORTHO05D000574 4.2e-06 57.4 238 28.2


User provided reference genes

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