Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 5.1e-103 377.9 206 100.0
SHI15129 Sapria himalayana HOM05D009124 ORTHO05D012381 2.0e-38 163.3 141 68.8
SHI21723 Sapria himalayana HOM05D009124 ORTHO05D012381 3.5e-35 152.5 168 57.7
SHI04229 Sapria himalayana HOM05D009124 ORTHO05D000062 1.3e-29 134.0 154 56.5
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 3.5e-19 99.4 66 78.8
SHI11261 Sapria himalayana HOM05D009124 ORTHO05D012381 1.0e-18 97.8 111 54.1
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 1.0e-18 97.8 66 78.8
SHI22703 Sapria himalayana HOM05D000026 ORTHO05D000094 1.2e-16 90.9 116 52.6
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 2.1e-16 90.1 67 71.6
SHI21854 Sapria himalayana HOM05D009124 ORTHO05D012381 8.0e-16 88.2 51 84.3
SHI11712 Sapria himalayana HOM05D009124 ORTHO05D012381 1.4e-15 87.4 98 54.1
SHI04527 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-15 86.3 99 55.6
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 3.1e-15 86.3 66 68.2
SHI25751 Sapria himalayana HOM05D009124 ORTHO05D366577 1.5e-14 84.0 84 66.7
SHI23541 Sapria himalayana HOM05D009124 ORTHO05D012381 4.4e-14 82.4 51 78.4
SHI01931 Sapria himalayana HOM05D009124 ORTHO05D012381 2.9e-13 79.7 162 40.7
SHI17721 Sapria himalayana HOM05D009124 ORTHO05D012381 1.9e-12 77.0 53 75.5
SHI27971 Sapria himalayana HOM05D009124 ORTHO05D364466 9.2e-12 74.7 51 82.4
SHI21722 Sapria himalayana HOM05D009124 ORTHO05D012381 1.2e-11 74.3 52 71.2
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 1.6e-08 63.9 69 50.7
SHI15943 Sapria himalayana HOM05D009124 ORTHO05D012381 1.6e-08 63.9 66 60.6
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 2.1e-08 63.5 70 48.6
Potri.006G163301 Populus trichocarpa HOM05D009124 ORTHO05D012381 2.1e-08 63.5 60 60.0
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 8.1e-08 61.6 68 50.0
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.1e-07 61.2 70 50.0
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 1.8e-07 60.5 69 50.7
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.8e-07 60.5 70 45.7
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 2.3e-07 60.1 70 48.6
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 2.3e-07 60.1 70 45.7
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 3.1e-07 59.7 70 52.9
Solyc03g070465.1 Solanum lycopersicum HOM05D009124 ORTHO05D012381 3.1e-07 59.7 56 55.4
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 4.0e-07 59.3 53 58.5
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 5.2e-07 58.9 69 47.8
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 6.8e-07 58.5 75 44.0
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.8e-07 58.5 69 47.8
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.8e-07 58.5 69 47.8
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 8.9e-07 58.2 77 48.1
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 8.9e-07 58.2 70 45.7
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 8.9e-07 58.2 69 47.8
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 8.9e-07 58.2 69 47.8
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 8.9e-07 58.2 67 47.8
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 8.9e-07 58.2 70 44.3
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.5e-06 57.4 75 42.7
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 1.5e-06 57.4 75 42.7
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 1.5e-06 57.4 75 42.7
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 1.5e-06 57.4 68 48.5
SHI00487 Sapria himalayana HOM05D009124 ORTHO05D012381 1.5e-06 57.4 56 57.1
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 1.5e-06 57.4 68 50.0
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 2.0e-06 57.0 75 42.7
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 2.0e-06 57.0 75 42.7
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 2.0e-06 57.0 75 42.7
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 2.0e-06 57.0 75 45.3
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 2.6e-06 56.6 75 45.3
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 2.6e-06 56.6 67 50.7
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 2.6e-06 56.6 67 50.7
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.4e-06 56.2 75 42.7
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 3.4e-06 56.2 77 45.5
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 3.4e-06 56.2 67 49.3
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 3.4e-06 56.2 31 83.9
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 3.4e-06 56.2 45 71.1
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 4.4e-06 55.8 75 42.7
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 4.4e-06 55.8 67 49.3
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 4.4e-06 55.8 75 44.0
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 4.4e-06 55.8 75 44.0
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 4.4e-06 55.8 75 44.0
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 4.4e-06 55.8 75 42.7
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 4.4e-06 55.8 75 42.7
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 4.4e-06 55.8 75 42.7
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 4.4e-06 55.8 67 49.3
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 4.4e-06 55.8 76 46.1
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 5.8e-06 55.5 82 43.9
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 5.8e-06 55.5 82 43.9
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 5.8e-06 55.5 82 43.9
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 5.8e-06 55.5 66 47.0
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 5.8e-06 55.5 67 46.3
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 5.8e-06 55.5 67 50.7
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 7.5e-06 55.1 67 49.3
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 7.5e-06 55.1 75 42.7
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 7.5e-06 55.1 77 45.5
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 9.9e-06 54.7 75 41.3
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 9.9e-06 54.7 68 45.6
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 9.9e-06 54.7 68 45.6
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 9.9e-06 54.7 67 47.8
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 9.9e-06 54.7 75 46.7
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 9.9e-06 54.7 67 47.8


User provided reference genes

Program Settings