Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26743 Sapria himalayana HOM05D000834 ORTHO05D006956 1.4e-142 509.6 257 100.0
vmacro14792 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 2.2e-63 246.5 216 61.6
Actinidia09509 Actinidia chinensis HOM05D000834 ORTHO05D006956 6.4e-63 245.0 212 64.2
CSS0037788 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.9e-62 243.4 218 61.9
Lj1C74T17 Lonicera japonica HOM05D000834 ORTHO05D006956 2.4e-62 243.0 205 64.4
SalBow4G1359 Salvia bowleyana HOM05D000834 ORTHO05D006956 4.2e-62 242.3 211 63.5
GSVIVG01028438001 Vitis vinifera HOM05D000834 ORTHO05D006956 4.2e-62 242.3 205 65.9
Manes.13G039100 Manihot esculenta HOM05D000834 ORTHO05D006956 5.4e-62 241.9 205 65.4
CDE09G1390 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 7.1e-62 241.5 218 62.8
Rhsim01G0259900 Rhododendron simsii HOM05D000834 ORTHO05D006956 7.1e-62 241.5 205 62.9
Manes.12G038400 Manihot esculenta HOM05D000834 ORTHO05D006956 9.3e-62 241.1 205 65.4
Sabra02G0194500 Salix brachista HOM05D000834 ORTHO05D006956 1.6e-61 240.4 213 63.4
arahy.Tifrunner.gnm1.ann1.WYWU3M Arachis hypogaea HOM05D000834 ORTHO05D006956 2.7e-61 239.6 206 63.6
PSO832G2974 Papaver somniferum HOM05D000834 ORTHO05D006956 2.7e-61 239.6 205 63.9
arahy.Tifrunner.gnm1.ann1.G250MW Arachis hypogaea HOM05D000834 ORTHO05D006956 3.5e-61 239.2 206 63.6
PSO764G0197 Papaver somniferum HOM05D000834 ORTHO05D006956 3.5e-61 239.2 205 63.4
Cfa002491 Carpinus fangiana HOM05D000834 ORTHO05D006956 4.6e-61 238.8 205 63.4
CiPaw.03G271600 Carya illinoinensis HOM05D000834 ORTHO05D006956 4.6e-61 238.8 205 63.9
CANSAT01G0496 Cannabis sativa HOM05D000834 ORTHO05D006956 1.0e-60 237.7 205 63.4
CANSAT01G1591 Cannabis sativa HOM05D000834 ORTHO05D006956 1.0e-60 237.7 205 63.4
Cc01_g17740 Coffea canephora HOM05D000834 ORTHO05D006956 1.3e-60 237.3 214 61.2
Haze_24714 Corylus avellana HOM05D000834 ORTHO05D006956 1.3e-60 237.3 205 63.4
FvH4_2g20370 Fragaria vesca HOM05D000834 ORTHO05D006956 1.3e-60 237.3 205 64.4
FAN24G3261 Fragaria x ananassa HOM05D000834 ORTHO05D006956 1.3e-60 237.3 205 64.4
Lj5g0006902 Lotus japonicus HOM05D000834 ORTHO05D006956 1.3e-60 237.3 206 62.1
Migut.D00483 Erythranthe guttata HOM05D000834 ORTHO05D006956 1.7e-60 236.9 212 61.3
FAN15G3585 Fragaria x ananassa HOM05D000834 ORTHO05D006956 1.7e-60 236.9 205 63.9
FAN27G0744 Fragaria x ananassa HOM05D000834 ORTHO05D006956 1.7e-60 236.9 205 63.9
Phvul.007G153700 Phaseolus vulgaris HOM05D000834 ORTHO05D006956 1.7e-60 236.9 206 63.1
Aqoxy5G00122 Aquilegia oxysepala HOM05D000834 ORTHO05D006956 2.3e-60 236.5 206 64.6
CSS0050145 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 2.3e-60 236.5 205 63.9
CDE02G1088 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 2.3e-60 236.5 215 62.3
MBI07_g22384_MAGBIO Magnolia biondii HOM05D000834 ORTHO05D006956 2.3e-60 236.5 205 64.9
Nn1g03003 Nelumbo nucifera HOM05D000834 ORTHO05D006956 2.3e-60 236.5 205 64.9
Oeu052085.1 Olea europaea HOM05D000834 ORTHO05D006956 3.9e-60 235.7 205 63.9
TAR362G0351 Trochodendron aralioides HOM05D000834 ORTHO05D006956 5.1e-60 235.3 205 63.9
MSTRG.18357 Avicennia marina HOM05D000834 ORTHO05D006956 6.6e-60 235.0 211 61.6
Prupe.8G214700 Prunus persica HOM05D000834 ORTHO05D006956 6.6e-60 235.0 205 63.4
PGR044G1351 Punica granatum HOM05D000834 ORTHO05D006956 6.6e-60 235.0 205 63.4
SGA_v2.0_scaffold1G00665 Striga asiatica HOM05D000121 ORTHO05D000102 6.6e-60 235.0 215 61.4
VMungo0720G2048 Vigna mungo HOM05D000834 ORTHO05D006956 6.6e-60 235.0 206 62.6
Potri.002G255900 Populus trichocarpa HOM05D000834 ORTHO05D006956 8.7e-60 234.6 205 62.9
Sed0018887 Sechium edule HOM05D000834 ORTHO05D006956 8.7e-60 234.6 205 63.9
Hund05490 Selenicereus undatus HOM05D000834 ORTHO05D006956 8.7e-60 234.6 205 63.9
ClCG06G001380 Citrullus lanatus HOM05D000834 ORTHO05D006956 1.5e-59 233.8 205 64.9
QL09p041638 Quercus lobata HOM05D000834 ORTHO05D006956 1.5e-59 233.8 205 64.9
RcHm_v2.0_Chr6g0286481 Rosa chinensis HOM05D000834 ORTHO05D006956 1.5e-59 233.8 205 62.9
Lalb_Chr02g0152761 Lupinus albus HOM05D000834 ORTHO05D006956 1.9e-59 233.4 206 62.1
HanXRQChr01g0014941 Helianthus annuus HOM05D000834 ORTHO05D006956 3.3e-59 232.6 205 62.0
Sc05g0002850 Simmondsia chinensis HOM05D000834 ORTHO05D006956 3.3e-59 232.6 205 62.9
Psat6g062480 Pisum sativum HOM05D000834 ORTHO05D006956 4.3e-59 232.3 206 61.7
TPR.G5902 Trifolium pratense HOM05D000834 ORTHO05D006956 4.3e-59 232.3 206 61.7
Glyma.13G127400 Glycine max HOM05D000834 ORTHO05D006956 5.6e-59 231.9 206 61.7
Thecc.01G249300 Theobroma cacao HOM05D000834 ORTHO05D006956 5.6e-59 231.9 200 64.5
Cpa.g.sc87.39 Carica papaya HOM05D000834 ORTHO05D006956 7.3e-59 231.5 211 61.1
unitig_22.g6307 Utricularia gibba HOM05D000834 ORTHO05D006956 7.3e-59 231.5 214 60.3
Medtr1g069455 Medicago truncatula HOM05D000834 ORTHO05D006956 9.6e-59 231.1 206 61.2
TWI12G0869 Tripterygium wilfordii HOM05D000834 ORTHO05D006956 9.6e-59 231.1 206 61.7
ECA248G1156 Erigeron canadensis HOM05D000121 ORTHO05D000102 1.3e-58 230.7 205 62.0
MD10G1175400 Malus domestica HOM05D000834 ORTHO05D006956 1.6e-58 230.3 205 62.4
SEGI_11456 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 1.6e-58 230.3 205 62.0
MELO3C022394.2 Cucumis melo HOM05D000834 ORTHO05D006956 2.1e-58 229.9 205 62.9
DCAR_004694 Daucus carota HOM05D000834 ORTHO05D006956 2.1e-58 229.9 214 60.3
Peaxi162Scf00043g00251 Petunia axillaris HOM05D000834 ORTHO05D006956 2.1e-58 229.9 205 62.4
Duzib138G0050 Durio zibethinus HOM05D000834 ORTHO05D006956 2.8e-58 229.6 200 64.5
Nitab4.5_0002435g0060 Nicotiana tabacum HOM05D000834 ORTHO05D006956 2.8e-58 229.6 206 62.1
CsaV3_6G007320 Cucumis sativus L. HOM05D000834 ORTHO05D006956 4.8e-58 228.8 205 62.4
Lsat_1_v5_gn_5_181100 Lactuca sativa HOM05D000834 ORTHO05D006956 4.8e-58 228.8 205 61.5
Nitab4.5_0000385g0020 Nicotiana tabacum HOM05D000834 ORTHO05D006956 6.2e-58 228.4 205 62.0
Potri.014G193300 Populus trichocarpa HOM05D000834 ORTHO05D006956 6.2e-58 228.4 205 62.0
ATR0787G052 Amborella trichopoda HOM05D000834 ORTHO05D006956 8.1e-58 228.0 205 61.5
Sp3g33600 Schrenkiella parvula HOM05D000834 ORTHO05D006956 8.1e-58 228.0 214 59.8
Gohir.D11G140000 Gossypium hirsutum HOM05D000834 ORTHO05D006956 1.1e-57 227.6 202 63.4
Gorai.007G150200 Gossypium raimondii HOM05D000834 ORTHO05D006956 1.1e-57 227.6 202 63.4
MD05G1187700 Malus domestica HOM05D000834 ORTHO05D006956 1.1e-57 227.6 205 62.0
BcaC07g41219 Brassica carinata HOM05D000834 ORTHO05D006956 1.8e-57 226.9 214 60.3
A09p58940 Brassica napus HOM05D000834 ORTHO05D006956 1.8e-57 226.9 214 60.3
C08p42260 Brassica napus HOM05D000834 ORTHO05D006956 1.8e-57 226.9 214 60.3
BolC8t51785H Brassica oleracea HOM05D000834 ORTHO05D006956 1.8e-57 226.9 214 60.3
BraA09t41279Z Brassica rapa HOM05D000834 ORTHO05D006956 1.8e-57 226.9 214 60.3
Ah.08g213640 Amaranthus hybridus HOM05D000834 ORTHO05D006956 2.4e-57 226.5 205 62.9
BcaB07g31592 Brassica carinata HOM05D000834 ORTHO05D006956 2.4e-57 226.5 214 59.8
Gohir.A11G133900 Gossypium hirsutum HOM05D000834 ORTHO05D006956 2.4e-57 226.5 202 62.9
A07p00360 Brassica napus HOM05D000834 ORTHO05D000909 3.1e-57 226.1 214 59.8
BraA07t27827Z Brassica rapa HOM05D000834 ORTHO05D006956 3.1e-57 226.1 214 59.8
Eucgr.K01422 Eucalyptus grandis HOM05D000834 ORTHO05D006956 3.1e-57 226.1 206 60.7
CAN.G536.3 Capsicum annuum HOM05D000834 ORTHO05D006956 4.0e-57 225.7 205 62.4
AUR62025434 Chenopodium quinoa HOM05D000834 ORTHO05D006956 4.0e-57 225.7 204 62.7
BcaC04g22796 Brassica carinata HOM05D000834 ORTHO05D006956 5.3e-57 225.3 214 59.8
A09p12840 Brassica napus HOM05D000834 ORTHO05D006956 5.3e-57 225.3 214 59.8
C09p15230 Brassica napus HOM05D000834 ORTHO05D006956 5.3e-57 225.3 214 59.8
BolC9t54430H Brassica oleracea HOM05D000834 ORTHO05D006956 5.3e-57 225.3 214 59.8
BraA09t36931Z Brassica rapa HOM05D000834 ORTHO05D006956 5.3e-57 225.3 214 59.8
BcaB08g34904 Brassica carinata HOM05D000834 ORTHO05D006956 9.0e-57 224.6 205 61.5
Carub.0003s3474 Capsella rubella HOM05D000834 ORTHO05D006956 9.0e-57 224.6 214 58.9
Zm00001eb258880 Zea mays HOM05D000834 ORTHO05D006956 9.0e-57 224.6 200 62.5
AL3G53320 Arabidopsis lyrata HOM05D000834 ORTHO05D006956 1.2e-56 224.2 214 58.4
AT2G20360 Arabidopsis thaliana HOM05D000834 ORTHO05D006956 1.2e-56 224.2 214 58.4
Thhalv10002002m.g Eutrema salsugineum HOM05D000834 ORTHO05D006956 1.2e-56 224.2 205 61.0
Atru.chr5.1869 Acer truncatum HOM05D000834 ORTHO05D006956 1.5e-56 223.8 203 60.6
Aa31LG8G17350 Aethionema arabicum HOM05D000834 ORTHO05D006956 2.0e-56 223.4 214 58.9
BcaC06g36723 Brassica carinata HOM05D000834 ORTHO05D006956 2.0e-56 223.4 205 61.0
BolC7t40517H Brassica oleracea HOM05D000834 ORTHO05D006956 2.0e-56 223.4 205 61.0
CARHR110880 Cardamine hirsuta HOM05D000834 ORTHO05D006956 2.0e-56 223.4 214 58.4
COL.COLO4_02902 Corchorus olitorius HOM05D000834 ORTHO05D006956 2.0e-56 223.4 200 63.5
C07p00720 Brassica napus HOM05D000834 ORTHO05D006956 2.6e-56 223.0 205 61.0
BcaB03g16828 Brassica carinata HOM05D000834 ORTHO05D006956 3.4e-56 222.6 205 61.0
HPP92_020769 Vanilla planifolia HOM05D000834 ORTHO05D006956 4.5e-56 222.2 207 60.9
Lalb_Chr06g0170741 Lupinus albus HOM05D000834 ORTHO05D006956 7.6e-56 221.5 206 60.2
Actinidia23703 Actinidia chinensis HOM05D000834 ORTHO05D006956 9.9e-56 221.1 207 60.9
Os02g0816800 Oryza sativa ssp. japonica HOM05D000834 ORTHO05D006956 9.9e-56 221.1 200 61.5
CSS0005533 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.3e-55 220.7 244 54.5
THA.LOC104820067 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 1.7e-55 220.3 205 59.5
THA.LOC104814534 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 2.9e-55 219.5 205 58.5
Sopen09g025590 Solanum pennellii HOM05D000834 ORTHO05D006956 1.4e-54 217.2 205 60.0
Solyc09g064450.3 Solanum lycopersicum HOM05D000834 ORTHO05D006956 4.2e-54 215.7 205 59.5
Ciclev10020464m.g Citrus clementina HOM05D000834 ORTHO05D006956 5.4e-54 215.3 229 53.3
SalBow6G5988 Salvia bowleyana HOM05D000834 ORTHO05D006956 4.5e-48 195.7 242 49.6
Ca_09644_v3 Cicer arietinum L. HOM05D000834 ORTHO05D006956 4.9e-47 192.2 206 53.9
SEGI_20632 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 3.9e-44 182.6 136 69.9
AagrBONN_evm.TU.Sc2ySwM_368.182 Anthoceros agrestis HOM05D000834 ORTHO05D006956 2.5e-43 179.9 192 52.6
Pp3c14_9070 Physcomitrium patens HOM05D000834 ORTHO05D006956 1.1e-41 174.5 205 46.8
AUR62008805 Chenopodium quinoa HOM05D000834 ORTHO05D006956 4.0e-41 172.6 148 63.5
Dinv43064 Davidia involucrata HOM05D000834 ORTHO05D006956 2.0e-40 170.2 164 57.3
Mapoly0051s0097 Marchantia polymorpha HOM05D000834 ORTHO05D006956 1.0e-39 167.9 201 48.3
Dinv19263 Davidia involucrata HOM05D000834 ORTHO05D006956 1.5e-35 154.1 138 60.1
Oeu015439.4 Olea europaea HOM05D000121 ORTHO05D000102 5.9e-32 142.1 121 66.9
SMO119G0351 Selaginella moellendorffii HOM05D000834 ORTHO05D006956 1.3e-31 141.0 203 41.9
CBR_g12802 Chara braunii HOM05D000834 ORTHO05D006956 3.8e-31 139.4 189 45.0
Gohir.A13G077301 Gossypium hirsutum HOM05D000834 ORTHO05D006956 5.0e-31 139.0 98 73.5
vmacro08769 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 1.6e-26 124.0 152 50.0
Gohir.A12G044900 Gossypium hirsutum HOM05D000751 ORTHO05D000889 4.5e-24 115.9 83 69.9
MCO13G055 Micromonas commoda HOM05D000834 ORTHO05D006956 1.0e-23 114.8 191 37.2
Gohir.A01G059200 Gossypium hirsutum HOM05D000751 ORTHO05D000889 8.5e-23 111.7 83 68.7
PRCOL_00005891 Prasinoderma coloniale HOM05D000834 ORTHO05D006956 3.2e-22 109.8 195 35.4
Pp3c1_35920 Physcomitrium patens HOM05D000834 ORTHO05D006956 9.4e-22 108.2 137 41.6
Cre10.g434450 Chlamydomonas reinhardtii HOM05D000834 ORTHO05D006956 1.8e-17 94.0 192 33.9
BcaB02g11316 Brassica carinata HOM05D000834 ORTHO05D000693 2.3e-12 77.0 54 74.1
CiPaw.05G147100 Carya illinoinensis HOM05D000834 ORTHO05D006956 3.8e-07 59.7 43 67.4


User provided reference genes

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