Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26706 Sapria himalayana HOM05D000002 ORTHO05D000047 1.9e-89 332.4 162 100.0
CSS0023793 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.5e-52 209.1 170 65.9
CSS0013731 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.8e-48 194.9 170 61.8
CSS0033792 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.7e-27 125.9 171 45.6
TPR.G14913 Trifolium pratense HOM05D000002 ORTHO05D000047 8.0e-27 124.4 158 44.3
CSS0036217 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-26 124.0 171 45.6
Hma1.2p1_1930F.1_g307960 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.5e-22 108.6 160 42.5
Sabra19G0025300 Salix brachista HOM05D007517 ORTHO05D006922 2.9e-21 105.9 96 57.3
CSS0014488 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.8e-21 105.5 60 78.3
QL02p068655 Quercus lobata HOM05D000002 ORTHO05D000047 3.8e-21 105.5 113 48.7
CSS0029373 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.2e-20 102.1 72 68.1
Oeu056019.1 Olea europaea HOM05D000002 ORTHO05D000047 4.2e-20 102.1 134 41.8
CSS0022161 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-19 98.6 58 75.9
PSO782G4628 Papaver somniferum HOM05D000002 ORTHO05D000001 1.8e-15 86.7 162 35.2
GSVIVG01004947001 Vitis vinifera HOM05D000002 ORTHO05D000047 9.1e-15 84.3 126 40.5
Psat0s1566g0160 Pisum sativum HOM05D000002 ORTHO05D000047 1.2e-14 84.0 89 48.3
RhsimUnG0026700 Rhododendron simsii HOM05D000002 ORTHO05D013648 2.0e-14 83.2 155 37.4
Psat0s3611g0120 Pisum sativum HOM05D000002 ORTHO05D000047 5.9e-14 81.6 109 40.4
Psat5g063200 Pisum sativum HOM05D000002 ORTHO05D000047 1.7e-13 80.1 89 48.3
Rhsim04G0082900 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.7e-13 80.1 126 42.9
Psat5g276720 Pisum sativum HOM05D000002 ORTHO05D000047 2.2e-13 79.7 89 47.2
Psat1g012160 Pisum sativum HOM05D000002 ORTHO05D000047 2.9e-13 79.3 109 41.3
Psat5g170560 Pisum sativum HOM05D000002 ORTHO05D000047 2.9e-13 79.3 105 44.8
Psat7g100400 Pisum sativum HOM05D000002 ORTHO05D000047 2.9e-13 79.3 105 44.8
Psat5g271160 Pisum sativum HOM05D000002 ORTHO05D000047 3.8e-13 79.0 105 44.8
Nn1g04886 Nelumbo nucifera HOM05D023806 ORTHO05D000047 5.0e-13 78.6 82 45.1
Psat1g137800 Pisum sativum HOM05D000002 ORTHO05D000047 5.0e-13 78.6 89 47.2
Psat7g045560 Pisum sativum HOM05D000002 ORTHO05D000047 6.5e-13 78.2 89 47.2
Psat7g053200 Pisum sativum HOM05D000002 ORTHO05D000047 6.5e-13 78.2 109 42.2
Hma1.2p1_0500F.1_g166990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-12 77.0 161 38.5
Psat3g182040 Pisum sativum HOM05D000002 ORTHO05D000047 1.9e-12 76.6 87 48.3
Potri.013G016350 Populus trichocarpa HOM05D000002 ORTHO05D000047 4.2e-12 75.5 152 30.9
RcHm_v2.0_Chr2g0166821 Rosa chinensis HOM05D000002 ORTHO05D000001 5.5e-12 75.1 203 30.5
Hma1.2p1_0281F.1_g113200 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.2e-12 74.7 135 31.1
Psat1g139360 Pisum sativum HOM05D000002 ORTHO05D000047 7.2e-12 74.7 109 38.5
Sabra16G0136200 Salix brachista HOM05D000002 ORTHO05D000047 9.5e-12 74.3 134 30.6
SEGI_01318 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.5e-12 74.3 143 35.0
Manes.08G060401 Manihot esculenta HOM05D000002 ORTHO05D000047 1.2e-11 73.9 66 48.5
PSO832G2869 Papaver somniferum HOM05D000002 ORTHO05D000001 1.6e-11 73.6 160 33.8
SEGI_21402 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.6e-11 73.6 138 33.3
Sabra16G0094000 Salix brachista HOM05D000179 ORTHO05D000107 2.1e-11 73.2 127 32.3
RcHm_v2.0_Chr3g0451051 Rosa chinensis HOM05D000002 ORTHO05D000001 3.6e-11 72.4 159 32.1
SEGI_08695 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.6e-11 72.4 138 33.3
SEGI_27781 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.6e-11 72.4 138 33.3
CSS0049957 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-11 71.2 151 29.1
Eucgr.K01505 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.4e-10 70.5 58 53.4
Oeu030157.1 Olea europaea HOM05D000002 ORTHO05D000047 1.4e-10 70.5 70 47.1
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 1.8e-10 70.1 132 29.5
RcHm_v2.0_Chr5g0078371 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-10 68.9 143 30.8
SEGI_08785 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.0e-10 68.9 116 31.9
Sopen04g009810 Solanum pennellii HOM05D000002 ORTHO05D000047 6.8e-10 68.2 157 29.3
Rhsim12G0116200 Rhododendron simsii HOM05D000002 ORTHO05D000047 8.8e-10 67.8 183 29.5
RcHm_v2.0_Chr6g0300481 Rosa chinensis HOM05D000002 ORTHO05D000001 8.8e-10 67.8 135 28.1
Psat4g115960 Pisum sativum HOM05D000002 ORTHO05D000047 1.2e-09 67.4 61 50.8
Oeu003480.1 Olea europaea HOM05D000002 ORTHO05D000047 2.0e-09 66.6 93 37.6
ECA232G1725 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-09 65.9 141 31.9
CSS0014458 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-09 65.1 138 29.7
ECA238G4843 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-09 64.7 151 27.8
Atru.chr3.2232 Acer truncatum HOM05D000002 ORTHO05D000001 9.8e-09 64.3 131 29.8
AUR62030950 Chenopodium quinoa HOM05D000002 ORTHO05D000001 9.8e-09 64.3 129 33.3
RcHm_v2.0_Chr4g0410841 Rosa chinensis HOM05D000002 ORTHO05D000001 9.8e-09 64.3 143 29.4
Medtr8g028325 Medicago truncatula HOM05D000002 ORTHO05D000047 2.8e-08 62.8 90 43.3
TPR.G28137 Trifolium pratense HOM05D000002 ORTHO05D000001 2.8e-08 62.8 158 29.7
Oeu026494.1 Olea europaea HOM05D000002 ORTHO05D000047 3.7e-08 62.4 53 45.3
Psat4g045080 Pisum sativum HOM05D000002 ORTHO05D000047 3.7e-08 62.4 61 47.5
Rhsim07G0041000 Rhododendron simsii HOM05D000432 ORTHO05D000320 4.9e-08 62.0 123 32.5
AUR62000949 Chenopodium quinoa HOM05D000048 ORTHO05D000001 8.3e-08 61.2 206 24.8
Thhalv10029155m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 8.3e-08 61.2 39 64.1
Hma1.2p1_0033F.1_g020960 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.3e-08 61.2 129 29.5
Hma1.2p1_0281F.1_g113140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.3e-08 61.2 125 32.8
RhsimUnG0047900 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.3e-08 61.2 135 30.4
Sabra19G0016100 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-07 60.8 135 26.7
AUR62008603 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.4e-07 60.5 216 25.0
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 1.4e-07 60.5 92 39.1
Sabra04G0151400 Salix brachista HOM05D000002 ORTHO05D000047 1.8e-07 60.1 92 39.1
Sabra05G0049300 Salix brachista HOM05D000002 ORTHO05D000047 1.8e-07 60.1 92 39.1
Sabra10G0054700 Salix brachista HOM05D000002 ORTHO05D000047 1.8e-07 60.1 92 39.1
Sabra17G0026400 Salix brachista HOM05D000002 ORTHO05D000047 1.8e-07 60.1 92 39.1
Sabra18G0042000 Salix brachista HOM05D000002 ORTHO05D000047 1.8e-07 60.1 92 39.1
Sopen08g009250 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.1 194 25.3
AUR62042691 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.4e-07 59.7 32 62.5
Psat7g265480 Pisum sativum HOM05D000002 ORTHO05D000047 2.4e-07 59.7 147 33.3
Sabra19G0019600 Salix brachista HOM05D000002 ORTHO05D000047 2.4e-07 59.7 135 26.7
ECA233G5777 Erigeron canadensis HOM05D000482 ORTHO05D000001 3.1e-07 59.3 130 29.2
ECA240G2249 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-07 59.3 148 30.4
Sabra16G0006500 Salix brachista HOM05D000002 ORTHO05D000047 3.1e-07 59.3 37 67.6
AUR62025792 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.1e-07 58.9 75 36.0
Cpa.g.sc344.1 Carica papaya HOM05D000002 ORTHO05D000047 5.4e-07 58.5 80 36.2
MD05G1287700 Malus domestica HOM05D000446 ORTHO05D000001 5.4e-07 58.5 51 52.9
Manes.15G179768 Manihot esculenta HOM05D000002 ORTHO05D000047 5.4e-07 58.5 143 30.1
AUR62032213 Chenopodium quinoa HOM05D001471 ORTHO05D000001 7.0e-07 58.2 95 36.8
HanXRQChr14g0461781 Helianthus annuus HOM05D000002 ORTHO05D000001 7.0e-07 58.2 188 25.5
Oeu001686.1 Olea europaea HOM05D000002 ORTHO05D000047 7.0e-07 58.2 43 58.1
VMungo0720G1246 Vigna mungo HOM05D000002 ORTHO05D000001 7.0e-07 58.2 101 29.7
Sabra16G0254000 Salix brachista HOM05D000054 ORTHO05D002584 9.2e-07 57.8 35 62.9
SHI00533 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-07 57.8 162 27.8
Sabra16G0096900 Salix brachista HOM05D000046 ORTHO05D000047 1.2e-06 57.4 92 38.0
AUR62005351 Chenopodium quinoa HOM05D001101 ORTHO05D000893 1.6e-06 57.0 94 33.0
AUR62010652 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.6e-06 57.0 37 54.1
Sabra15G0060700 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-06 57.0 167 28.1
Sopen01g028070 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 56.6 51 52.9
Sopen03g021340 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 56.6 51 52.9
Sopen04g022060 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 56.6 51 52.9
Sopen09g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 56.6 51 52.9
arahy.Tifrunner.gnm1.ann1.Z8QNYX Arachis hypogaea HOM05D000002 ORTHO05D000001 2.7e-06 56.2 51 47.1
ECA234G3610 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 56.2 159 28.3
PSO384G2910 Papaver somniferum HOM05D000002 ORTHO05D000001 2.7e-06 56.2 122 27.9
Aa31sc214G30 Aethionema arabicum HOM05D000002 ORTHO05D000001 3.5e-06 55.8 168 23.2
Ah.03g134480 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.5e-06 55.8 142 29.6
Ah.09g233160 Amaranthus hybridus HOM05D000002 ORTHO05D000047 3.5e-06 55.8 54 40.7
AUR62029608 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.5e-06 55.8 31 61.3
Hma1.2p1_0168F.1_g074070 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.5e-06 55.8 165 26.7
AUR62018951 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.5e-06 55.5 34 52.9
Manes.04G059192 Manihot esculenta HOM05D000002 ORTHO05D000047 4.5e-06 55.5 33 60.6
Manes.05G142578 Manihot esculenta HOM05D000002 ORTHO05D000047 4.5e-06 55.5 33 60.6
Manes.06G098650 Manihot esculenta HOM05D000002 ORTHO05D000047 4.5e-06 55.5 33 60.6
SHI01914 Sapria himalayana HOM05D000002 ORTHO05D000047 4.5e-06 55.5 155 29.0
CSS0002046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.9e-06 55.1 126 30.2
CSS0017142 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.9e-06 55.1 126 30.2
ECA232G2811 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.9e-06 55.1 205 23.9
Manes.08G099122 Manihot esculenta HOM05D000002 ORTHO05D000047 5.9e-06 55.1 33 60.6
SHI01819 Sapria himalayana HOM05D000002 ORTHO05D000047 5.9e-06 55.1 154 29.2
SHI22594 Sapria himalayana HOM05D000002 ORTHO05D000047 5.9e-06 55.1 155 27.7
Sopen01g003530 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen01g006040 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen01g007340 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen01g022700 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen01g027500 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen02g035510 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen03g020100 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen03g038760 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen04g003470 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen04g006210 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen04g010900 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen04g012240 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen04g013780 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen04g014270 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen04g031270 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen05g003950 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen05g006520 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen05g033640 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen06g009400 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 47 55.3
Sopen06g012710 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen06g019260 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen06g019750 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen06g024240 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen07g008080 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen07g032500 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen08g014300 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen08g025510 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen09g013130 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen09g026670 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen10g008540 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen11g022110 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen11g023750 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
Sopen12g034280 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-06 55.1 31 61.3
arahy.Tifrunner.gnm1.ann1.52GFDY Arachis hypogaea HOM05D000002 ORTHO05D000001 7.7e-06 54.7 51 45.1
arahy.Tifrunner.gnm1.ann1.A7W0M1 Arachis hypogaea HOM05D000002 ORTHO05D000001 7.7e-06 54.7 51 45.1
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 7.7e-06 54.7 51 45.1
arahy.Tifrunner.gnm1.ann1.L12S6X Arachis hypogaea HOM05D000002 ORTHO05D000001 7.7e-06 54.7 51 43.1
ECA238G4452 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-06 54.7 128 27.3
HanXRQChr04g0112371 Helianthus annuus HOM05D000002 ORTHO05D000047 7.7e-06 54.7 126 31.0
Manes.12G088366 Manihot esculenta HOM05D000002 ORTHO05D000047 7.7e-06 54.7 51 47.1
Oeu005587.1 Olea europaea HOM05D000002 ORTHO05D000047 7.7e-06 54.7 46 52.2


User provided reference genes

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