Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26705 Sapria himalayana HOM05D000002 ORTHO05D000047 1.1e-40 169.5 79 100.0
CSS0029373 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.5e-26 121.7 99 63.6
CSS0014488 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-24 116.3 119 52.9
Psat7g020120 Pisum sativum HOM05D000002 ORTHO05D000047 1.9e-21 105.5 119 45.4
Eucgr.K01505 Eucalyptus grandis HOM05D000002 ORTHO05D000047 7.1e-21 103.6 106 48.1
Psat1g012160 Pisum sativum HOM05D000002 ORTHO05D000047 9.3e-21 103.2 119 44.5
Psat3g037520 Pisum sativum HOM05D000002 ORTHO05D000047 9.3e-21 103.2 119 44.5
Psat5g170560 Pisum sativum HOM05D000002 ORTHO05D000047 9.3e-21 103.2 119 44.5
Psat5g276720 Pisum sativum HOM05D000002 ORTHO05D000047 9.3e-21 103.2 119 44.5
Psat7g100400 Pisum sativum HOM05D000002 ORTHO05D000047 9.3e-21 103.2 119 44.5
Psat6g009920 Pisum sativum HOM05D002561 ORTHO05D008175 1.2e-20 102.8 119 44.5
TPR.G14913 Trifolium pratense HOM05D000002 ORTHO05D000047 1.2e-20 102.8 119 45.4
Psat1g137800 Pisum sativum HOM05D000002 ORTHO05D000047 2.7e-20 101.7 119 43.7
Psat5g143640 Pisum sativum HOM05D000002 ORTHO05D000047 2.7e-20 101.7 119 43.7
Psat5g271160 Pisum sativum HOM05D000002 ORTHO05D000047 4.6e-20 100.9 117 43.6
Psat6g235840 Pisum sativum HOM05D000050 ORTHO05D000047 7.8e-20 100.1 119 43.7
Ciclev10024522m.g Citrus clementina HOM05D000002 ORTHO05D000047 1.0e-19 99.8 119 44.5
Psat1g099520 Pisum sativum HOM05D000002 ORTHO05D000047 2.3e-19 98.6 119 43.7
Psat3g164600 Pisum sativum HOM05D005888 ORTHO05D007791 2.3e-19 98.6 119 44.5
Psat5g247280 Pisum sativum HOM05D000002 ORTHO05D000047 2.3e-19 98.6 119 43.7
Psat7g045560 Pisum sativum HOM05D000002 ORTHO05D000047 3.9e-19 97.8 119 42.9
Psat0s1566g0160 Pisum sativum HOM05D000002 ORTHO05D000047 1.9e-18 95.5 117 42.7
CSS0022161 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.8e-17 90.9 99 50.5
Eucgr.L01554 Eucalyptus grandis HOM05D000002 ORTHO05D000047 6.2e-17 90.5 105 43.8
Thhalv10029155m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 8.1e-17 90.1 119 41.2
Psat7g265480 Pisum sativum HOM05D000002 ORTHO05D000047 4.0e-16 87.8 146 37.0
Psat4g045080 Pisum sativum HOM05D000002 ORTHO05D000047 1.5e-15 85.9 57 63.2
CSS0023793 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-15 85.1 57 68.4
Hma1.2p1_0500F.1_g166990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.6e-15 83.6 57 63.2
Psat4g115960 Pisum sativum HOM05D000002 ORTHO05D000047 8.4e-14 80.1 57 61.4
Rhsim04G0082900 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.1e-13 79.7 61 59.0
CSS0033792 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-12 76.3 58 60.3
CSS0036217 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-12 76.3 58 60.3
Ciclev10033319m.g Citrus clementina HOM05D000002 ORTHO05D000047 1.2e-12 76.3 67 50.7
Eucgr.A02186 Eucalyptus grandis HOM05D000002 ORTHO05D000047 3.5e-12 74.7 57 54.4
Psat5g063200 Pisum sativum HOM05D000002 ORTHO05D000047 1.5e-10 69.3 99 37.4
Manes.08G060401 Manihot esculenta HOM05D000002 ORTHO05D000047 1.3e-09 66.2 57 57.9
RcHm_v2.0_Chr1g0341931 Rosa chinensis HOM05D000002 ORTHO05D000047 2.1e-09 65.5 119 31.9
Psat1g154800 Pisum sativum HOM05D000002 ORTHO05D000047 4.8e-09 64.3 94 38.3
Prupe.4G247600 Prunus persica HOM05D000002 ORTHO05D000047 1.4e-08 62.8 76 40.8
Manes.01G083275 Manihot esculenta HOM05D000002 ORTHO05D000047 6.9e-08 60.5 88 35.2
Sopen08g009250 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-08 60.1 119 31.9
AUR62031157 Chenopodium quinoa HOM05D000287 ORTHO05D000001 1.2e-07 59.7 84 40.5
Sopen01g028070 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 59.7 119 31.9
Sopen03g021340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 59.7 119 31.9
Sopen06g019750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 59.7 119 31.9
Sopen09g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 59.7 119 31.9
Solyc04g054227.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen01g003530 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen01g006040 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen01g007340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen01g022700 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen01g027500 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen02g035510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen03g020100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen03g038760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen04g003470 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen04g006210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen04g010900 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen04g012240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen04g013780 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen04g014270 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen04g031270 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen05g003950 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen05g006520 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen05g033640 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen06g012710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen06g019260 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen06g024240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen07g008080 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen07g032500 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen08g014300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen08g025510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen09g013130 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen09g026670 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen10g008540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen11g022110 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen11g023750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Sopen12g034280 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.3 119 31.9
Eucgr.C01532 Eucalyptus grandis HOM05D000002 ORTHO05D000047 2.0e-07 58.9 51 51.0
AUR62008603 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.5e-07 57.8 119 29.4
arahy.Tifrunner.gnm1.ann1.58GN9R Arachis hypogaea HOM05D000002 ORTHO05D000047 7.6e-07 57.0 51 45.1
CiPaw.10G061100 Carya illinoinensis HOM05D000002 ORTHO05D000047 9.9e-07 56.6 27 88.9
AUR62001170 Chenopodium quinoa HOM05D000002 ORTHO05D000001 9.9e-07 56.6 49 49.0
CSS0049957 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-06 56.2 75 40.0
Psat1g139360 Pisum sativum HOM05D000002 ORTHO05D000047 1.3e-06 56.2 37 62.2
Ah.10g032180 Amaranthus hybridus HOM05D000002 ORTHO05D000047 2.2e-06 55.5 49 46.9
AUR62005807 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.8e-06 54.7 113 31.9
CiPaw.06G017400 Carya illinoinensis HOM05D000002 ORTHO05D000047 6.4e-06 53.9 37 70.3
AUR62032132 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.4e-06 53.5 49 49.0


User provided reference genes

Program Settings