Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26670 Sapria himalayana HOM05D003783 ORTHO05D004568 2.2e-84 315.5 149 100.0
SHI54470 Sapria himalayana HOM05D003783 ORTHO05D004568 2.6e-24 115.9 71 77.5
Lalb_Chr00c29g0408271 Lupinus albus HOM05D003783 ORTHO05D004568 1.7e-23 113.2 77 71.4
CANSAT16G0001 Cannabis sativa HOM05D003783 ORTHO05D004568 4.9e-23 111.7 70 74.3
RcHm_v2.0_Chr6g0258021 Rosa chinensis HOM05D003783 ORTHO05D004568 4.9e-23 111.7 70 74.3
RcHm_v2.0_MTg0498851 Rosa chinensis HOM05D003783 ORTHO05D004568 4.9e-23 111.7 70 74.3
SabraMtG0000900 Salix brachista HOM05D003783 ORTHO05D004568 4.9e-23 111.7 70 74.3
CDE02G3531 Ceratophyllum demersum HOM05D003783 ORTHO05D004568 6.4e-23 111.3 70 72.9
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 6.4e-23 111.3 70 74.3
Gorai.013G137500 Gossypium raimondii HOM05D003783 ORTHO05D004568 6.4e-23 111.3 70 74.3
LjContig00315g0021149 Lotus japonicus HOM05D003783 ORTHO05D004568 6.4e-23 111.3 70 74.3
LjContig00439g0010231 Lotus japonicus HOM05D003783 ORTHO05D004568 6.4e-23 111.3 70 74.3
Medtr0212s0020 Medicago truncatula HOM05D003783 ORTHO05D004568 6.4e-23 111.3 70 74.3
Psat4g179160 Pisum sativum HOM05D003783 ORTHO05D004568 6.4e-23 111.3 70 74.3
arahy.Tifrunner.gnm1.ann1.WX3135 Arachis hypogaea HOM05D003783 ORTHO05D004568 1.4e-22 110.2 70 72.9
MBI05_g05347_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 1.9e-22 109.8 70 72.9
Nn1g09973 Nelumbo nucifera HOM05D003783 ORTHO05D004568 1.9e-22 109.8 70 72.9
Nn1g10116 Nelumbo nucifera HOM05D003783 ORTHO05D004568 1.9e-22 109.8 70 72.9
SHI54813 Sapria himalayana HOM05D003783 ORTHO05D004568 1.9e-22 109.8 71 73.2
Zm00001eb434740 Zea mays HOM05D003783 ORTHO05D004568 3.2e-22 109.0 70 72.9
Zm00001eb436360 Zea mays HOM05D003783 ORTHO05D004568 3.2e-22 109.0 70 72.9
Zm00001eb437010 Zea mays HOM05D003783 ORTHO05D004568 3.2e-22 109.0 70 72.9
Zm00001eb438050 Zea mays HOM05D003783 ORTHO05D004568 3.2e-22 109.0 70 72.9
Zm00001eb438170 Zea mays HOM05D003783 ORTHO05D004568 3.2e-22 109.0 70 72.9
Zm00001eb438820 Zea mays HOM05D003783 ORTHO05D004568 3.2e-22 109.0 70 72.9
Nn1g10045 Nelumbo nucifera HOM05D003783 ORTHO05D004568 5.4e-22 108.2 70 71.4
Ah.01g011790 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.2e-21 107.1 70 72.9
Ah.10g028070 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.2e-21 107.1 70 72.9
CsaV3_UNG210090 Cucumis sativus L. HOM05D003783 ORTHO05D004568 1.6e-21 106.7 77 67.5
AL3G44640 Arabidopsis lyrata HOM05D003783 ORTHO05D004568 2.1e-21 106.3 69 72.5
ATMG00830 Arabidopsis thaliana HOM05D003783 ORTHO05D004568 2.1e-21 106.3 69 72.5
BNapus_Darmor_BZH_scaffold_234p00030 Brassica napus HOM05D003783 ORTHO05D004568 2.1e-21 106.3 69 72.5
BolSC28t60383H Brassica oleracea HOM05D003783 ORTHO05D004568 2.1e-21 106.3 69 72.5
BolSC28t60416H Brassica oleracea HOM05D003783 ORTHO05D004568 2.1e-21 106.3 69 72.5
BraSC177t45753Z Brassica rapa HOM05D003783 ORTHO05D004568 2.1e-21 106.3 69 72.5
BraSC224t45815Z Brassica rapa HOM05D003783 ORTHO05D004568 2.1e-21 106.3 69 72.5
CARHR283110 Cardamine hirsuta HOM05D003783 ORTHO05D004568 2.1e-21 106.3 69 72.5
Sp3g25620 Schrenkiella parvula HOM05D003783 ORTHO05D004568 2.1e-21 106.3 69 72.5
GSVIVG01004964001 Vitis vinifera HOM05D003783 ORTHO05D004568 2.7e-21 105.9 70 70.0
GSVIVG01006218001 Vitis vinifera HOM05D003783 ORTHO05D004568 2.7e-21 105.9 70 70.0
Psat6g195120 Pisum sativum HOM05D003783 ORTHO05D004568 7.8e-21 104.4 70 70.0
DCAR_032429 Daucus carota HOM05D003783 ORTHO05D004568 1.0e-20 104.0 70 71.4
Solyc00g049210.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 3.0e-20 102.4 70 70.0
Solyc00g500249.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 3.0e-20 102.4 70 70.0
Solyc00g500348.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 3.0e-20 102.4 70 70.0
Lsat_1_v5_gn_5_16100 Lactuca sativa HOM05D003783 ORTHO05D004568 4.3e-19 98.6 70 67.1
Thhalv10029166m.g Eutrema salsugineum HOM05D003783 ORTHO05D004568 5.6e-19 98.2 60 75.0
HanXRQChr04g0109071 Helianthus annuus HOM05D003783 ORTHO05D004568 7.3e-19 97.8 70 67.1
HanXRQChr08g0236011 Helianthus annuus HOM05D003783 ORTHO05D004568 7.3e-19 97.8 70 67.1
HanXRQChr14g0434351 Helianthus annuus HOM05D003783 ORTHO05D004568 7.3e-19 97.8 70 67.1
HanXRQMTg0579571 Helianthus annuus HOM05D003783 ORTHO05D004568 7.3e-19 97.8 70 67.1
Lsat_1_v5_gn_7_99780 Lactuca sativa HOM05D003783 ORTHO05D004568 9.6e-19 97.4 70 65.7
HanXRQChr09g0246391 Helianthus annuus HOM05D003783 ORTHO05D004568 1.6e-18 96.7 70 65.7
Solyc11g063620.2 Solanum lycopersicum HOM05D003783 ORTHO05D004568 2.8e-18 95.9 70 67.1
SGA_v2.0_scaffold245G44749 Striga asiatica HOM05D003783 ORTHO05D004568 2.8e-18 95.9 70 67.1
HanXRQChr11g0334171 Helianthus annuus HOM05D003783 ORTHO05D004568 3.6e-18 95.5 70 65.7
HanXRQChr17g0544021 Helianthus annuus HOM05D003783 ORTHO05D004568 3.6e-18 95.5 70 65.7
BolC1t03458H Brassica oleracea HOM05D003783 ORTHO05D004568 8.1e-18 94.4 69 66.7
CAN.G1439.7 Capsicum annuum HOM05D003783 ORTHO05D004568 8.1e-18 94.4 70 64.3
Nn3g20873 Nelumbo nucifera HOM05D003783 ORTHO05D004568 1.8e-17 93.2 60 73.3
Sc11g0004390 Simmondsia chinensis HOM05D003783 ORTHO05D004568 1.2e-16 90.5 58 74.1
Nitab4.5_0000592g0140 Nicotiana tabacum HOM05D003783 ORTHO05D004568 5.8e-16 88.2 59 71.2
HanXRQChr01g0003471 Helianthus annuus HOM05D003783 ORTHO05D004568 6.0e-13 78.2 54 66.7
SEGI_30299 Sequoiadendron giganteum HOM05D003783 ORTHO05D004568 8.7e-12 74.3 72 55.6
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 3.1e-09 65.9 63 58.7
Lalb_Chr22g0357831 Lupinus albus HOM05D003783 ORTHO05D004568 1.2e-08 63.9 56 57.1
MD14G1092300 Malus domestica HOM05D003783 ORTHO05D004568 2.6e-08 62.8 70 50.0
Psat7g150720 Pisum sativum HOM05D003783 ORTHO05D004568 2.4e-06 56.2 45 57.8


User provided reference genes

Program Settings