Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26605 Sapria himalayana HOM05D002759 ORTHO05D003290 2.3e-128 462.2 228 100.0
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 5.9e-28 128.6 152 43.4
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 8.6e-27 124.8 154 42.9
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 5.6e-26 122.1 152 42.8
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.2e-25 120.9 155 45.2
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 8.9e-24 114.8 152 40.1
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 1.2e-23 114.4 152 42.1
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.5e-23 114.0 153 40.5
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 1.5e-23 114.0 152 42.1
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 3.4e-23 112.8 152 42.1
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 4.4e-23 112.5 152 42.1
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.2e-22 110.2 154 40.9
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 4.9e-22 109.0 152 40.8
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 6.4e-22 108.6 182 37.9
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 6.4e-22 108.6 154 42.9
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 1.1e-21 107.8 182 37.9
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 1.9e-21 107.1 152 40.1
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 4.1e-21 105.9 159 40.9
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 5.4e-21 105.5 152 38.8
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 7.0e-21 105.1 152 41.4
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 7.0e-21 105.1 152 41.4
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 2.7e-20 103.2 157 43.3
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 2.7e-20 103.2 154 37.7
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 3.5e-20 102.8 152 42.8
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 6.0e-20 102.1 152 37.5
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 7.8e-20 101.7 154 38.3
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 1.7e-19 100.5 152 40.1
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 1.7e-19 100.5 153 36.6
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 2.3e-19 100.1 155 41.9
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 2.3e-19 100.1 182 33.5
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 3.9e-19 99.4 152 37.5
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 5.0e-19 99.0 152 42.1
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 1.1e-18 97.8 147 38.1
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 1.1e-18 97.8 154 40.3
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.5e-18 97.4 154 37.7
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 1.9e-18 97.1 154 38.3
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.9e-18 97.1 154 37.7
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.9e-18 97.1 154 37.0
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.5e-18 96.7 154 37.7
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 3.3e-18 96.3 154 38.3
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 3.3e-18 96.3 152 40.8
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 3.3e-18 96.3 154 37.7
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 3.3e-18 96.3 154 38.3
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 4.3e-18 95.9 154 35.7
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 4.3e-18 95.9 163 33.7
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 4.3e-18 95.9 182 36.8
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 5.6e-18 95.5 152 37.5
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 5.6e-18 95.5 154 37.7
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 5.6e-18 95.5 154 37.7
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 7.3e-18 95.1 154 37.0
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 7.3e-18 95.1 154 37.0
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 9.5e-18 94.7 153 39.9
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 1.2e-17 94.4 154 37.7
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 1.2e-17 94.4 154 38.3
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.6e-17 94.0 154 38.3
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 3.6e-17 92.8 154 37.0
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 4.7e-17 92.4 154 37.7
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 6.2e-17 92.0 154 39.0
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 6.2e-17 92.0 154 39.0
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 1.1e-16 91.3 152 38.8
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 1.1e-16 91.3 151 37.1
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 1.4e-16 90.9 154 38.3
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 1.4e-16 90.9 154 38.3
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 1.4e-16 90.9 152 36.2
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 2.3e-16 90.1 154 33.1
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 5.2e-16 89.0 152 34.9
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 6.8e-16 88.6 154 38.3
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 8.9e-16 88.2 152 35.5
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 8.9e-16 88.2 152 34.2
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 2.0e-15 87.0 204 31.9
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 2.6e-15 86.7 153 36.6
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 2.6e-15 86.7 156 30.8
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 7.5e-15 85.1 152 34.9
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 7.5e-15 85.1 152 34.9
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 1.3e-14 84.3 152 34.2
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 1.3e-14 84.3 152 32.9
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 1.1e-13 81.3 187 28.9
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 1.1e-13 81.3 151 34.4
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 5.4e-13 79.0 147 34.7
CARHR284400 Cardamine hirsuta HOM05D002759 ORTHO05D003290 1.6e-12 77.4 111 37.8
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 3.5e-12 76.3 153 38.6
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 1.0e-11 74.7 160 30.0
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 2.3e-11 73.6 164 28.7
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 3.9e-11 72.8 154 32.5
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 5.1e-11 72.4 167 32.3
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 8.6e-11 71.6 148 32.4
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 8.6e-11 71.6 156 32.7
AL7G28920 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.1e-10 71.2 131 29.8
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 1.5e-10 70.9 154 33.1
FAN08G3490 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.9e-10 70.5 177 29.4
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 2.5e-10 70.1 154 28.6
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 3.3e-10 69.7 146 32.2
C04p13030 Brassica napus HOM05D002759 ORTHO05D003290 3.3e-10 69.7 146 32.2
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 4.3e-10 69.3 128 34.4
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 5.6e-10 68.9 152 32.2
ATR0661G443 Amborella trichopoda HOM05D002759 ORTHO05D003290 7.3e-10 68.6 149 31.5
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 9.5e-10 68.2 126 34.9
arahy.Tifrunner.gnm1.ann1.HX0PY9 Arachis hypogaea HOM05D002759 ORTHO05D003290 1.6e-09 67.4 154 32.5
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 2.8e-09 66.6 125 36.8
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 3.6e-09 66.2 158 31.0
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 3.6e-09 66.2 154 29.9
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 6.2e-09 65.5 178 29.2
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.4e-08 64.3 158 30.4
MD00G1111200 Malus domestica HOM05D002759 ORTHO05D003290 5.2e-08 62.4 112 32.1
MD08G1225400 Malus domestica HOM05D002759 ORTHO05D003290 5.2e-08 62.4 112 32.1
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 9.9e-07 58.2 159 28.9
SHI06012 Sapria himalayana HOM05D001959 ORTHO05D001955 9.9e-07 58.2 41 65.9
SHI02739 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-06 57.4 34 76.5
SHI31429 Sapria himalayana HOM05D001959 ORTHO05D003290 2.2e-06 57.0 42 71.4


User provided reference genes

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