Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26097 Sapria himalayana HOM05D004490 ORTHO05D005353 4.6e-55 217.6 108 100.0
SHI09004 Sapria himalayana HOM05D004490 ORTHO05D005353 4.4e-21 104.8 76 71.1
SHI11687 Sapria himalayana HOM05D000854 ORTHO05D000778 7.4e-21 104.0 73 69.9
SHI44560 Sapria himalayana HOM05D000854 ORTHO05D000778 8.5e-17 90.5 93 50.5
SHI46906 Sapria himalayana HOM05D000854 ORTHO05D000778 1.9e-16 89.4 93 51.6
SHI11764 Sapria himalayana HOM05D000854 ORTHO05D000778 7.2e-16 87.4 70 61.4
SHI35984 Sapria himalayana HOM05D000854 ORTHO05D002255 4.7e-15 84.7 104 49.0
SHI23195 Sapria himalayana HOM05D000624 ORTHO05D000495 1.0e-14 83.6 59 72.9
SHI46487 Sapria himalayana HOM05D000854 ORTHO05D000778 1.5e-13 79.7 90 46.7
SHI00989 Sapria himalayana HOM05D000624 ORTHO05D000495 2.4e-11 72.4 75 52.0
SHI41020 Sapria himalayana HOM05D004490 ORTHO05D005353 5.3e-11 71.2 54 72.2
SHI54375 Sapria himalayana HOM05D004490 ORTHO05D005353 5.3e-11 71.2 54 72.2
SHI53694 Sapria himalayana HOM05D032682 ORTHO05D370912 1.2e-10 70.1 47 72.3
SHI29410 Sapria himalayana HOM05D000624 ORTHO05D000495 2.6e-10 68.9 95 48.4
SHI49447 Sapria himalayana HOM05D000854 ORTHO05D369725 2.6e-10 68.9 43 74.4
SHI46093 Sapria himalayana HOM05D000854 ORTHO05D000778 4.5e-10 68.2 93 41.9
SHI20766 Sapria himalayana HOM05D000854 ORTHO05D365378 7.7e-10 67.4 86 44.2
SHI36565 Sapria himalayana HOM05D000854 ORTHO05D366339 3.8e-09 65.1 43 72.1
SHI44512 Sapria himalayana HOM05D000854 ORTHO05D368322 3.8e-09 65.1 46 65.2
SHI46138 Sapria himalayana HOM05D000049 ORTHO05D000027 1.5e-08 63.2 38 76.3
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 3.2e-08 62.0 76 43.4
SHI24676 Sapria himalayana HOM05D017578 ORTHO05D369169 3.2e-08 62.0 56 62.5
SHI47422 Sapria himalayana HOM05D000854 ORTHO05D000778 3.2e-08 62.0 46 63.0
SHI47900 Sapria himalayana HOM05D000854 ORTHO05D000778 3.2e-08 62.0 46 63.0
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 4.2e-08 61.6 78 43.6
SHI13360 Sapria himalayana HOM05D000854 ORTHO05D005862 4.2e-08 61.6 41 68.3
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 5.5e-08 61.2 79 41.8
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 5.5e-08 61.2 81 43.2
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 5.5e-08 61.2 81 43.2
SHI48309 Sapria himalayana HOM05D000854 ORTHO05D000778 5.5e-08 61.2 94 39.4
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 9.4e-08 60.5 76 43.4
SHI45400 Sapria himalayana HOM05D017578 ORTHO05D370531 9.4e-08 60.5 60 55.0
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 1.2e-07 60.1 81 42.0
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 1.6e-07 59.7 76 40.8
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 2.1e-07 59.3 79 40.5
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 2.1e-07 59.3 79 40.5
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 2.1e-07 59.3 76 42.1
SHI18595 Sapria himalayana HOM05D000854 ORTHO05D000778 2.1e-07 59.3 47 61.7
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 2.7e-07 58.9 76 43.4
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 2.7e-07 58.9 79 41.8
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 3.6e-07 58.5 76 39.5
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 3.6e-07 58.5 77 40.3
SHI15788 Sapria himalayana HOM05D017578 ORTHO05D367873 6.1e-07 57.8 70 48.6
SHI22459 Sapria himalayana HOM05D017578 ORTHO05D000495 6.1e-07 57.8 73 50.7
SHI37757 Sapria himalayana HOM05D000624 ORTHO05D000495 6.1e-07 57.8 60 55.0
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 6.1e-07 57.8 81 43.2
Cpa.g.sc66.44 Carica papaya HOM05D004490 ORTHO05D005353 8.0e-07 57.4 81 43.2
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 8.0e-07 57.4 75 42.7
SHI42692 Sapria himalayana HOM05D000854 ORTHO05D000778 8.0e-07 57.4 38 68.4
SHI47250 Sapria himalayana HOM05D000624 ORTHO05D000495 8.0e-07 57.4 41 65.9
SHI20840 Sapria himalayana HOM05D000624 ORTHO05D364646 1.0e-06 57.0 38 65.8
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 1.4e-06 56.6 79 39.2
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 1.4e-06 56.6 79 39.2
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 1.4e-06 56.6 82 39.0
EL10Ac1g00082 Beta vulgaris HOM05D004490 ORTHO05D005353 2.3e-06 55.8 78 44.9
SHI29823 Sapria himalayana HOM05D017578 ORTHO05D367017 2.3e-06 55.8 65 49.2
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 3.0e-06 55.5 84 44.0
SHI43497 Sapria himalayana HOM05D017578 ORTHO05D370715 3.0e-06 55.5 60 53.3
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 3.0e-06 55.5 81 40.7
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 3.0e-06 55.5 79 40.5
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 4.0e-06 55.1 79 40.5
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 4.0e-06 55.1 76 40.8
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 4.0e-06 55.1 76 39.5
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 4.0e-06 55.1 76 39.5
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 5.2e-06 54.7 80 40.0
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 5.2e-06 54.7 48 54.2
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 6.7e-06 54.3 77 40.3
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 6.7e-06 54.3 77 44.2
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 6.7e-06 54.3 76 40.8
SHI17792 Sapria himalayana HOM05D000624 ORTHO05D000495 6.7e-06 54.3 41 58.5
SHI48293 Sapria himalayana HOM05D017578 ORTHO05D000495 6.7e-06 54.3 62 50.0
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 8.8e-06 53.9 81 39.5


User provided reference genes

Program Settings