Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26092 Sapria himalayana HOM05D005069 ORTHO05D006024 6.8e-116 420.6 206 100.0
Manes.04G046000 Manihot esculenta HOM05D005069 ORTHO05D006024 6.5e-50 201.4 130 76.9
Lj6C680G7 Lonicera japonica HOM05D005069 ORTHO05D006024 1.1e-49 200.7 130 71.5
Manes.04G046718 Manihot esculenta HOM05D005069 ORTHO05D006024 1.1e-49 200.7 130 75.4
Manes.04G040225 Manihot esculenta HOM05D005069 ORTHO05D006024 4.2e-49 198.7 130 74.6
Haze_01171 Corylus avellana HOM05D005069 ORTHO05D006024 5.5e-49 198.4 130 72.3
QL06p010168 Quercus lobata HOM05D005069 ORTHO05D006024 5.5e-49 198.4 130 70.8
Cfa015421 Carpinus fangiana HOM05D005069 ORTHO05D006024 2.7e-48 196.1 130 71.5
Duzib151G0715 Durio zibethinus HOM05D005069 ORTHO05D006024 8.0e-48 194.5 129 69.0
CiPaw.02G080300 Carya illinoinensis HOM05D005069 ORTHO05D006024 1.8e-47 193.4 129 72.1
Hma1.2p1_0078F.1_g040620 Hydrangea macrophylla HOM05D005069 ORTHO05D006024 4.0e-47 192.2 130 69.2
TWI09G0094 Tripterygium wilfordii HOM05D005069 ORTHO05D006024 5.2e-47 191.8 130 69.2
Oeu035688.1 Olea europaea HOM05D005069 ORTHO05D006024 6.7e-47 191.4 130 69.2
Sabra07G0100800 Salix brachista HOM05D005069 ORTHO05D006024 8.8e-47 191.0 130 70.8
Prupe.1G132400 Prunus persica HOM05D005069 ORTHO05D006024 1.5e-46 190.3 129 72.1
GSVIVG01035118001 Vitis vinifera HOM05D005069 ORTHO05D006024 1.5e-46 190.3 130 68.5
Rhsim04G0224900 Rhododendron simsii HOM05D005069 ORTHO05D006024 2.0e-46 189.9 130 66.9
Cpa.g.sc50.170 Carica papaya HOM05D005069 ORTHO05D006024 2.6e-46 189.5 130 70.8
Dinv29734 Davidia involucrata HOM05D005069 ORTHO05D006024 3.3e-46 189.1 130 67.7
Cc03_g01590 Coffea canephora HOM05D005069 ORTHO05D006024 7.5e-46 188.0 130 67.7
Potri.007G124900 Populus trichocarpa HOM05D005069 ORTHO05D006024 7.5e-46 188.0 130 69.2
vmacro08181 Vaccinium macrocarpon HOM05D005069 ORTHO05D006024 9.7e-46 187.6 130 66.2
AUR62032020 Chenopodium quinoa HOM05D005069 ORTHO05D006024 1.7e-45 186.8 130 66.2
Nitab4.5_0006814g0030 Nicotiana tabacum HOM05D005069 ORTHO05D006024 2.2e-45 186.4 134 62.7
RcHm_v2.0_Chr4g0423171 Rosa chinensis HOM05D005069 ORTHO05D006024 2.2e-45 186.4 129 71.3
AUR62018094 Chenopodium quinoa HOM05D005069 ORTHO05D006024 3.7e-45 185.7 130 65.4
Nitab4.5_0000695g0020 Nicotiana tabacum HOM05D005069 ORTHO05D006024 1.4e-44 183.7 134 62.7
Ciclev10007186m.g Citrus clementina HOM05D005069 ORTHO05D006024 3.1e-44 182.6 130 67.7
FvH4_4g18570 Fragaria vesca HOM05D005069 ORTHO05D006024 3.1e-44 182.6 127 68.5
FAN12G2768 Fragaria x ananassa HOM05D005069 ORTHO05D006024 3.1e-44 182.6 127 68.5
FAN12G2807 Fragaria x ananassa HOM05D005069 ORTHO05D006024 3.1e-44 182.6 127 68.5
Gohir.A02G050600 Gossypium hirsutum HOM05D005069 ORTHO05D006024 3.1e-44 182.6 130 64.6
Ca_10630_v3 Cicer arietinum L. HOM05D005069 ORTHO05D006024 5.3e-44 181.8 130 66.2
EL10Ac3g06634 Beta vulgaris HOM05D005069 ORTHO05D006024 7.0e-44 181.4 130 62.3
FAN07G0695 Fragaria x ananassa HOM05D005069 ORTHO05D006024 7.0e-44 181.4 127 68.5
Gorai.005G061500 Gossypium raimondii HOM05D005069 ORTHO05D006024 7.0e-44 181.4 130 63.8
Atru.chr4.2893 Acer truncatum HOM05D005069 ORTHO05D006024 9.1e-44 181.0 130 66.9
Gohir.D02G055533 Gossypium hirsutum HOM05D005069 ORTHO05D006024 9.1e-44 181.0 130 63.1
Ah.00g238040 Amaranthus hybridus HOM05D005069 ORTHO05D006024 1.2e-43 180.6 129 62.0
FAN17G1646 Fragaria x ananassa HOM05D005069 ORTHO05D006024 1.2e-43 180.6 127 67.7
Medtr2g435850 Medicago truncatula HOM05D005069 ORTHO05D006024 1.6e-43 180.3 130 63.8
Medtr2g436170 Medicago truncatula HOM05D005069 ORTHO05D006024 1.6e-43 180.3 130 63.8
Psat1g155720 Pisum sativum HOM05D005069 ORTHO05D006024 1.6e-43 180.3 130 63.8
TPR.G14183 Trifolium pratense HOM05D005069 ORTHO05D006024 2.0e-43 179.9 130 64.6
Actinidia40297 Actinidia chinensis HOM05D005069 ORTHO05D006024 2.7e-43 179.5 129 65.9
Lalb_Chr15g0086031 Lupinus albus HOM05D005069 ORTHO05D006024 2.7e-43 179.5 130 66.9
Migut.G00081 Erythranthe guttata HOM05D005069 ORTHO05D006024 5.9e-43 178.3 130 60.8
Migut.G00133 Erythranthe guttata HOM05D005069 ORTHO05D006024 5.9e-43 178.3 130 60.8
CAN.G1639.1 Capsicum annuum HOM05D005069 ORTHO05D006024 1.0e-42 177.6 134 62.7
Nn3g21533 Nelumbo nucifera HOM05D005069 ORTHO05D006024 1.3e-42 177.2 130 65.4
Phvul.009G250200 Phaseolus vulgaris HOM05D005069 ORTHO05D006024 1.7e-42 176.8 130 64.6
TAR636G0683 Trochodendron aralioides HOM05D005069 ORTHO05D006024 2.2e-42 176.4 129 65.1
Sc13g0003270 Simmondsia chinensis HOM05D005069 ORTHO05D006024 2.9e-42 176.0 129 63.6
VMungo1309G0850 Vigna mungo HOM05D005069 ORTHO05D006024 6.5e-42 174.9 130 64.6
SGA_v2.0_scaffold67G22603 Striga asiatica HOM05D005069 ORTHO05D006024 8.5e-42 174.5 130 62.3
THA.LOC104818914 Tarenaya hassleriana HOM05D005069 ORTHO05D006024 1.1e-41 174.1 127 64.6
arahy.Tifrunner.gnm1.ann1.9CA2Y1 Arachis hypogaea HOM05D005069 ORTHO05D006024 2.5e-41 172.9 129 64.3
arahy.Tifrunner.gnm1.ann1.I5RJVP Arachis hypogaea HOM05D005069 ORTHO05D006024 4.2e-41 172.2 130 63.8
Lj6g0024094 Lotus japonicus HOM05D005069 ORTHO05D006024 5.5e-41 171.8 130 63.8
Sopen01g028200 Solanum pennellii HOM05D005069 ORTHO05D006024 7.2e-41 171.4 133 61.7
CANSAT78G0554 Cannabis sativa HOM05D005069 ORTHO05D006024 1.6e-40 170.2 132 63.6
Medtr5g020160 Medicago truncatula HOM05D005069 ORTHO05D006024 3.6e-40 169.1 130 62.3
Eucgr.H03956 Eucalyptus grandis HOM05D005069 ORTHO05D006024 6.1e-40 168.3 131 63.4
SalBow2G1933 Salvia bowleyana HOM05D005069 ORTHO05D006024 6.1e-40 168.3 129 60.5
Solyc01g066510.3 Solanum lycopersicum HOM05D005069 ORTHO05D006024 6.1e-40 168.3 133 60.9
Peaxi162Scf00065g01432 Petunia axillaris HOM05D005069 ORTHO05D006024 5.2e-39 165.2 139 56.8
PGR004G1871 Punica granatum HOM05D005069 ORTHO05D006024 5.2e-39 165.2 130 61.5
Glyma.15G192400 Glycine max HOM05D005069 ORTHO05D006024 6.8e-39 164.9 131 62.6
Glyma.09G042600 Glycine max HOM05D005069 ORTHO05D006024 8.8e-39 164.5 131 63.4
Aa31LG11G8390 Aethionema arabicum HOM05D005069 ORTHO05D006024 4.4e-38 162.2 134 55.2
DCAR_023295 Daucus carota HOM05D005069 ORTHO05D006024 9.8e-38 161.0 128 57.8
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 1.7e-37 160.2 130 62.3
AL8G22670 Arabidopsis lyrata HOM05D005069 ORTHO05D006024 2.8e-37 159.5 125 60.0
AT5G49150 Arabidopsis thaliana HOM05D005069 ORTHO05D006024 2.8e-37 159.5 125 60.0
Thhalv10005444m.g Eutrema salsugineum HOM05D005069 ORTHO05D006024 3.7e-37 159.1 125 59.2
Carub.0008s0895 Capsella rubella HOM05D005069 ORTHO05D006024 3.1e-36 156.0 125 58.4
BraA02t08774Z Brassica rapa HOM05D005069 ORTHO05D006024 4.1e-36 155.6 125 56.8
CARHR186440 Cardamine hirsuta HOM05D005069 ORTHO05D006024 5.4e-36 155.2 125 59.2
A02p37900 Brassica napus HOM05D005069 ORTHO05D006024 2.7e-35 152.9 125 56.0
Sp2g19500 Schrenkiella parvula HOM05D005069 ORTHO05D006024 2.7e-35 152.9 125 58.4
BcaC03g17701 Brassica carinata HOM05D005069 ORTHO05D006024 1.0e-34 151.0 125 56.0
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 1.0e-34 151.0 125 56.0
BolC2t11776H Brassica oleracea HOM05D005069 ORTHO05D006024 1.0e-34 151.0 125 56.0
CSS0043552 Camellia sinensis var. sinensis HOM05D005069 ORTHO05D006024 7.2e-33 144.8 95 66.3
PSO407G0255 Papaver somniferum HOM05D005069 ORTHO05D006024 1.4e-31 140.6 130 50.0
Aqoxy2G02916 Aquilegia oxysepala HOM05D005069 ORTHO05D006024 6.8e-31 138.3 130 52.3
PSO170G2573 Papaver somniferum HOM05D005069 ORTHO05D006024 1.2e-30 137.5 130 49.2
CDE02G3967 Ceratophyllum demersum HOM05D005069 ORTHO05D006024 2.8e-29 132.9 128 48.4
Hund20526 Selenicereus undatus HOM05D005069 ORTHO05D006024 8.3e-29 131.3 130 53.1
Lsat_1_v5_gn_6_96300 Lactuca sativa HOM05D005069 ORTHO05D006024 1.6e-27 127.1 131 50.4
HanXRQChr03g0089561 Helianthus annuus HOM05D005069 ORTHO05D006024 2.9e-26 122.9 127 48.8
HanXRQChr03g0089541 Helianthus annuus HOM05D005069 ORTHO05D006024 1.1e-25 120.9 127 47.2
Zm00001eb099800 Zea mays HOM05D005069 ORTHO05D006024 1.5e-25 120.6 136 45.6
ATR0580G217 Amborella trichopoda HOM05D005069 ORTHO05D006024 4.0e-23 112.5 143 40.6
HPP92_022450 Vanilla planifolia HOM05D005069 ORTHO05D006024 5.2e-23 112.1 128 45.3
MBI15_g07480_MAGBIO Magnolia biondii HOM05D005069 ORTHO05D006024 5.4e-20 102.1 138 43.5
Lsat_1_v5_gn_2_33340 Lactuca sativa HOM05D005069 ORTHO05D006024 1.6e-16 90.5 96 44.8
Lsat_1_v5_gn_9_29220 Lactuca sativa HOM05D003976 ORTHO05D006024 2.1e-16 90.1 74 54.1
Manes.04G045344 Manihot esculenta HOM05D005069 ORTHO05D006024 9.5e-09 64.7 38 76.3
Manes.04G046272 Manihot esculenta HOM05D005069 ORTHO05D006024 6.2e-08 62.0 38 73.7
ECA240G4151 Erigeron canadensis HOM05D005069 ORTHO05D006024 3.4e-06 56.2 113 36.3


User provided reference genes

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