Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26089 Sapria himalayana HOM05D005069 ORTHO05D006024 3.0e-78 295.0 141 100.0
TWI09G0094 Tripterygium wilfordii HOM05D005069 ORTHO05D006024 1.9e-40 169.5 126 64.3
Prupe.1G132400 Prunus persica HOM05D005069 ORTHO05D006024 1.2e-39 166.8 125 65.6
Cfa015421 Carpinus fangiana HOM05D005069 ORTHO05D006024 6.0e-39 164.5 126 62.7
Actinidia40297 Actinidia chinensis HOM05D005069 ORTHO05D006024 1.0e-38 163.7 126 59.5
Haze_01171 Corylus avellana HOM05D005069 ORTHO05D006024 1.0e-38 163.7 133 60.9
GSVIVG01035118001 Vitis vinifera HOM05D005069 ORTHO05D006024 1.8e-38 162.9 126 63.5
Atru.chr4.2893 Acer truncatum HOM05D005069 ORTHO05D006024 3.9e-38 161.8 126 60.3
Manes.04G046000 Manihot esculenta HOM05D005069 ORTHO05D006024 8.7e-38 160.6 124 59.7
Glyma.09G042600 Glycine max HOM05D005069 ORTHO05D006024 1.1e-37 160.2 125 61.6
Glyma.15G192400 Glycine max HOM05D005069 ORTHO05D006024 1.1e-37 160.2 125 61.6
Manes.04G040225 Manihot esculenta HOM05D005069 ORTHO05D006024 1.5e-37 159.8 124 59.7
Manes.04G045344 Manihot esculenta HOM05D005069 ORTHO05D006024 1.5e-37 159.8 124 59.7
Manes.04G046272 Manihot esculenta HOM05D005069 ORTHO05D006024 1.5e-37 159.8 124 59.7
Phvul.009G250200 Phaseolus vulgaris HOM05D005069 ORTHO05D006024 1.9e-37 159.5 127 61.4
CSS0043552 Camellia sinensis var. sinensis HOM05D005069 ORTHO05D006024 3.3e-37 158.7 126 61.1
Ciclev10007186m.g Citrus clementina HOM05D005069 ORTHO05D006024 4.3e-37 158.3 126 62.7
CANSAT78G0554 Cannabis sativa HOM05D005069 ORTHO05D006024 2.1e-36 156.0 126 60.3
RcHm_v2.0_Chr4g0423171 Rosa chinensis HOM05D005069 ORTHO05D006024 2.1e-36 156.0 126 60.3
TAR636G0082 Trochodendron aralioides HOM05D005069 ORTHO05D006024 2.1e-36 156.0 126 57.9
Lj6g0024094 Lotus japonicus HOM05D005069 ORTHO05D006024 4.8e-36 154.8 126 60.3
QL06p010168 Quercus lobata HOM05D005069 ORTHO05D006024 8.2e-36 154.1 126 57.1
Hma1.2p1_0078F.1_g040620 Hydrangea macrophylla HOM05D005069 ORTHO05D006024 1.4e-35 153.3 126 57.1
PGR004G1871 Punica granatum HOM05D005069 ORTHO05D006024 1.4e-35 153.3 126 55.6
Thecc.04G288200 Theobroma cacao HOM05D005069 ORTHO05D006024 1.4e-35 153.3 127 56.7
TPR.G14183 Trifolium pratense HOM05D005069 ORTHO05D006024 1.4e-35 153.3 125 60.0
VMungo1309G0850 Vigna mungo HOM05D005069 ORTHO05D006024 1.8e-35 152.9 125 59.2
Ca_10630_v3 Cicer arietinum L. HOM05D005069 ORTHO05D006024 2.4e-35 152.5 126 59.5
FAN07G0695 Fragaria x ananassa HOM05D005069 ORTHO05D006024 5.3e-35 151.4 128 59.4
FvH4_4g18570 Fragaria vesca HOM05D005069 ORTHO05D006024 6.9e-35 151.0 128 59.4
FAN12G2768 Fragaria x ananassa HOM05D005069 ORTHO05D006024 6.9e-35 151.0 128 59.4
FAN12G2807 Fragaria x ananassa HOM05D005069 ORTHO05D006024 6.9e-35 151.0 128 59.4
Lj6C680G7 Lonicera japonica HOM05D005069 ORTHO05D006024 9.0e-35 150.6 126 56.3
Medtr5g020160 Medicago truncatula HOM05D005069 ORTHO05D006024 9.0e-35 150.6 126 59.5
Duzib151G0715 Durio zibethinus HOM05D005069 ORTHO05D006024 1.2e-34 150.2 124 58.1
Lalb_Chr15g0086041 Lupinus albus HOM05D005069 ORTHO05D006024 1.5e-34 149.8 126 57.1
Medtr2g435850 Medicago truncatula HOM05D005069 ORTHO05D006024 2.0e-34 149.4 126 57.9
Medtr2g436170 Medicago truncatula HOM05D005069 ORTHO05D006024 2.0e-34 149.4 126 57.9
vmacro08181 Vaccinium macrocarpon HOM05D005069 ORTHO05D006024 2.0e-34 149.4 126 56.3
Aqoxy2G02916 Aquilegia oxysepala HOM05D005069 ORTHO05D006024 2.6e-34 149.1 126 55.6
FAN17G1646 Fragaria x ananassa HOM05D005069 ORTHO05D006024 2.6e-34 149.1 128 58.6
CiPaw.02G080300 Carya illinoinensis HOM05D005069 ORTHO05D006024 4.5e-34 148.3 130 56.9
Peaxi162Scf00065g01432 Petunia axillaris HOM05D005069 ORTHO05D006024 2.9e-33 145.6 128 52.3
Psat1g155720 Pisum sativum HOM05D005069 ORTHO05D006024 2.9e-33 145.6 126 56.3
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 5.0e-33 144.8 121 56.2
DCAR_023295 Daucus carota HOM05D005069 ORTHO05D006024 8.5e-33 144.1 126 56.3
Aa31LG11G8390 Aethionema arabicum HOM05D005069 ORTHO05D006024 2.5e-32 142.5 126 51.6
Nitab4.5_0000695g0020 Nicotiana tabacum HOM05D005069 ORTHO05D006024 2.5e-32 142.5 126 51.6
Potri.007G124900 Populus trichocarpa HOM05D005069 ORTHO05D006024 2.5e-32 142.5 126 54.0
Sabra07G0100800 Salix brachista HOM05D005069 ORTHO05D006024 3.2e-32 142.1 125 53.6
Cpa.g.sc50.170 Carica papaya HOM05D005069 ORTHO05D006024 7.2e-32 141.0 126 51.6
THA.LOC104818914 Tarenaya hassleriana HOM05D005069 ORTHO05D006024 7.2e-32 141.0 128 51.6
Carub.0008s0895 Capsella rubella HOM05D005069 ORTHO05D006024 9.3e-32 140.6 127 50.4
Migut.G00081 Erythranthe guttata HOM05D005069 ORTHO05D006024 9.3e-32 140.6 125 53.6
Migut.G00133 Erythranthe guttata HOM05D005069 ORTHO05D006024 9.3e-32 140.6 125 53.6
Gorai.005G061500 Gossypium raimondii HOM05D005069 ORTHO05D006024 9.3e-32 140.6 124 54.0
Nitab4.5_0006814g0030 Nicotiana tabacum HOM05D005069 ORTHO05D006024 9.3e-32 140.6 126 51.6
CAN.G1639.1 Capsicum annuum HOM05D005069 ORTHO05D006024 1.6e-31 139.8 123 53.7
Oeu035688.1 Olea europaea HOM05D005069 ORTHO05D006024 1.6e-31 139.8 126 52.4
AT5G49150 Arabidopsis thaliana HOM05D005069 ORTHO05D006024 2.1e-31 139.4 128 50.0
Gohir.A02G050600 Gossypium hirsutum HOM05D005069 ORTHO05D006024 2.7e-31 139.0 124 54.0
AL8G22670 Arabidopsis lyrata HOM05D005069 ORTHO05D006024 3.6e-31 138.7 128 49.2
CARHR186440 Cardamine hirsuta HOM05D005069 ORTHO05D006024 3.6e-31 138.7 126 50.0
Gohir.D02G055566 Gossypium hirsutum HOM05D005069 ORTHO05D006024 3.6e-31 138.7 120 55.0
Cc03_g01590 Coffea canephora HOM05D005069 ORTHO05D006024 1.8e-30 136.3 126 51.6
Rhsim04G0224900 Rhododendron simsii HOM05D005069 ORTHO05D006024 1.8e-30 136.3 158 44.9
PSO170G2573 Papaver somniferum HOM05D005069 ORTHO05D006024 3.9e-30 135.2 123 52.0
Thhalv10005444m.g Eutrema salsugineum HOM05D005069 ORTHO05D006024 5.1e-30 134.8 124 50.8
BcaC03g17701 Brassica carinata HOM05D005069 ORTHO05D006024 1.1e-29 133.7 128 46.9
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 1.1e-29 133.7 128 46.9
BolC2t11776H Brassica oleracea HOM05D005069 ORTHO05D006024 1.1e-29 133.7 128 46.9
AUR62032020 Chenopodium quinoa HOM05D005069 ORTHO05D006024 1.1e-29 133.7 123 52.0
Solyc01g066510.3 Solanum lycopersicum HOM05D005069 ORTHO05D006024 1.1e-29 133.7 126 50.0
BraA02t08774Z Brassica rapa HOM05D005069 ORTHO05D006024 1.5e-29 133.3 128 46.9
CDE02G3730 Ceratophyllum demersum HOM05D005069 ORTHO05D006024 1.5e-29 133.3 116 52.6
Eucgr.H03956 Eucalyptus grandis HOM05D005069 ORTHO05D006024 1.5e-29 133.3 126 53.2
A02p37900 Brassica napus HOM05D005069 ORTHO05D006024 1.9e-29 132.9 128 46.1
Sp2g19500 Schrenkiella parvula HOM05D005069 ORTHO05D006024 1.9e-29 132.9 134 46.3
Sc13g0003270 Simmondsia chinensis HOM05D005069 ORTHO05D006024 3.3e-29 132.1 126 52.4
Lsat_1_v5_gn_6_96300 Lactuca sativa HOM05D005069 ORTHO05D006024 5.7e-29 131.3 127 51.2
PSO407G0255 Papaver somniferum HOM05D005069 ORTHO05D006024 7.4e-29 131.0 123 50.4
EL10Ac3g06634 Beta vulgaris HOM05D005069 ORTHO05D006024 1.3e-28 130.2 123 49.6
Hund20526 Selenicereus undatus HOM05D005069 ORTHO05D006024 1.6e-28 129.8 130 48.5
SalBow2G1933 Salvia bowleyana HOM05D005069 ORTHO05D006024 2.8e-28 129.0 128 47.7
MBI15_g07480_MAGBIO Magnolia biondii HOM05D005069 ORTHO05D006024 8.2e-28 127.5 126 49.2
AUR62018094 Chenopodium quinoa HOM05D005069 ORTHO05D006024 3.1e-27 125.6 123 48.8
Lsat_1_v5_gn_1_63401 Lactuca sativa HOM05D001329 ORTHO05D004946 9.1e-27 124.0 123 49.6
SGA_v2.0_scaffold67G22603 Striga asiatica HOM05D005069 ORTHO05D006024 4.5e-26 121.7 125 48.0
Ah.00g238040 Amaranthus hybridus HOM05D005069 ORTHO05D006024 2.2e-25 119.4 122 45.1
Sopen01g028200 Solanum pennellii HOM05D005069 ORTHO05D006024 2.9e-25 119.0 162 38.9
HPP92_022450 Vanilla planifolia HOM05D005069 ORTHO05D006024 2.9e-25 119.0 125 44.8
HanXRQChr03g0089561 Helianthus annuus HOM05D005069 ORTHO05D006024 3.8e-25 118.6 126 46.8
Lsat_1_v5_gn_9_94461 Lactuca sativa HOM05D001329 ORTHO05D004946 1.1e-24 117.1 123 48.0
arahy.Tifrunner.gnm1.ann1.9CA2Y1 Arachis hypogaea HOM05D005069 ORTHO05D006024 3.0e-22 109.0 126 46.8
HanXRQChr03g0089541 Helianthus annuus HOM05D005069 ORTHO05D006024 5.1e-22 108.2 126 44.4
Manes.04G046727 Manihot esculenta HOM05D005069 ORTHO05D006024 6.7e-22 107.8 74 66.2
arahy.Tifrunner.gnm1.ann1.I5RJVP Arachis hypogaea HOM05D005069 ORTHO05D006024 6.9e-19 97.8 126 43.7
ATR0580G217 Amborella trichopoda HOM05D005069 ORTHO05D006024 4.5e-18 95.1 125 39.2
Zm00001eb099800 Zea mays HOM05D005069 ORTHO05D006024 7.9e-15 84.3 126 37.3
Os09g0424701 Oryza sativa ssp. japonica HOM05D005069 ORTHO05D006024 3.9e-14 82.0 103 39.8
TPR.G8658 Trifolium pratense HOM05D005069 ORTHO05D006024 2.6e-13 79.3 65 60.0
SMO174G0176 Selaginella moellendorffii HOM05D005069 ORTHO05D006024 7.2e-08 61.2 93 29.0


User provided reference genes

Program Settings