Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25900 Sapria himalayana HOM05D006790 ORTHO05D007715 8.7e-215 750.0 363 100.0
Eucgr.I02107 Eucalyptus grandis HOM05D006790 ORTHO05D007715 1.7e-16 91.3 73 58.9
Ciclev10011421m.g Citrus clementina HOM05D006790 ORTHO05D007715 6.4e-16 89.4 138 42.8
Manes.01G107100 Manihot esculenta HOM05D006790 ORTHO05D007715 2.4e-15 87.4 76 53.9
Cpa.g.sc179.51 Carica papaya HOM05D006790 ORTHO05D007715 3.2e-15 87.0 52 69.2
CiPaw.03G006800 Carya illinoinensis HOM05D006790 ORTHO05D007715 3.2e-15 87.0 69 56.5
Thecc.07G120400 Theobroma cacao HOM05D006790 ORTHO05D007715 3.2e-15 87.0 59 62.7
Eucgr.I02105 Eucalyptus grandis HOM05D006790 ORTHO05D007715 7.0e-15 85.9 72 59.7
Duzib268G0872 Durio zibethinus HOM05D006790 ORTHO05D007715 9.2e-15 85.5 59 62.7
Migut.H00551 Erythranthe guttata HOM05D006790 ORTHO05D007715 9.2e-15 85.5 43 74.4
MELO3C023782.2 Cucumis melo HOM05D006790 ORTHO05D007715 1.2e-14 85.1 68 55.9
Hund19591 Selenicereus undatus HOM05D006790 ORTHO05D007715 1.6e-14 84.7 96 47.9
CiPaw.04G004400 Carya illinoinensis HOM05D006790 ORTHO05D007715 2.0e-14 84.3 40 80.0
ClCG05G011930 Citrullus lanatus HOM05D006790 ORTHO05D007715 2.0e-14 84.3 114 43.0
Hma1.2p1_0588F.1_g184410 Hydrangea macrophylla HOM05D006790 ORTHO05D007715 2.0e-14 84.3 174 32.8
Prupe.3G242700 Prunus persica HOM05D006790 ORTHO05D007715 3.5e-14 83.6 42 78.6
Cfa007981 Carpinus fangiana HOM05D006790 ORTHO05D007715 4.6e-14 83.2 42 76.2
Potri.004G106000 Populus trichocarpa HOM05D006790 ORTHO05D007715 4.6e-14 83.2 72 52.8
Aa31LG2G3550 Aethionema arabicum HOM05D006790 ORTHO05D007715 6.0e-14 82.8 60 53.3
EL10Ac2g04125 Beta vulgaris HOM05D006790 ORTHO05D007715 6.0e-14 82.8 39 79.5
Lj7A8G40 Lonicera japonica HOM05D006790 ORTHO05D007715 6.0e-14 82.8 93 47.3
Sed0013505 Sechium edule HOM05D006790 ORTHO05D007715 6.0e-14 82.8 68 54.4
CsaV3_3G020510 Cucumis sativus L. HOM05D006790 ORTHO05D007715 1.0e-13 82.0 68 54.4
Haze_14092 Corylus avellana HOM05D006790 ORTHO05D007715 1.3e-13 81.6 168 33.3
THA.LOC104822671 Tarenaya hassleriana HOM05D006790 ORTHO05D007715 1.3e-13 81.6 66 56.1
TWI53G1762 Tripterygium wilfordii HOM05D006790 ORTHO05D007715 1.3e-13 81.6 39 84.6
Nn3g17634 Nelumbo nucifera HOM05D006790 ORTHO05D007715 1.7e-13 81.3 40 75.0
Dinv33908 Davidia involucrata HOM05D006790 ORTHO05D007715 2.3e-13 80.9 167 33.5
Sabra04G0076300 Salix brachista HOM05D001314 ORTHO05D001165 2.3e-13 80.9 104 44.2
Atru.chr8.778 Acer truncatum HOM05D006790 ORTHO05D007715 3.0e-13 80.5 168 35.7
GSVIVG01036474001 Vitis vinifera HOM05D006790 ORTHO05D007715 3.0e-13 80.5 163 34.4
AUR62031597 Chenopodium quinoa HOM05D006790 ORTHO05D007715 5.0e-13 79.7 162 33.3
MD17G1072100 Malus domestica HOM05D006790 ORTHO05D007715 5.0e-13 79.7 38 81.6
Nitab4.5_0001324g0030 Nicotiana tabacum HOM05D006790 ORTHO05D007715 6.6e-13 79.3 60 55.0
ECA238G0674 Erigeron canadensis HOM05D000337 ORTHO05D007715 1.1e-12 78.6 45 68.9
QL02p053561 Quercus lobata HOM05D006790 ORTHO05D007715 1.5e-12 78.2 99 42.4
Glyma.19G042100 Glycine max HOM05D006790 ORTHO05D007715 1.9e-12 77.8 108 42.6
AUR62012471 Chenopodium quinoa HOM05D006790 ORTHO05D007715 2.5e-12 77.4 109 37.6
Lsat_1_v5_gn_2_86460 Lactuca sativa HOM05D006790 ORTHO05D007715 2.5e-12 77.4 36 77.8
MBI14_g10506_MAGBIO Magnolia biondii HOM05D006790 ORTHO05D007715 2.5e-12 77.4 40 70.0
Solyc02g065620.3 Solanum lycopersicum HOM05D006790 ORTHO05D007715 2.5e-12 77.4 83 45.8
Sopen02g015820 Solanum pennellii HOM05D006790 ORTHO05D007715 2.5e-12 77.4 83 45.8
Actinidia36298 Actinidia chinensis HOM05D006790 ORTHO05D007715 3.3e-12 77.0 42 69.0
FvH4_6g45660 Fragaria vesca HOM05D006790 ORTHO05D007715 3.3e-12 77.0 36 77.8
FAN14G5652 Fragaria x ananassa HOM05D006790 ORTHO05D007715 3.3e-12 77.0 36 77.8
Nitab4.5_0004656g0020 Nicotiana tabacum HOM05D006790 ORTHO05D007715 3.3e-12 77.0 39 74.4
RcHm_v2.0_Chr2g0163811 Rosa chinensis HOM05D006790 ORTHO05D007715 3.3e-12 77.0 60 53.3
PGSC0003DMG400026556 Solanum tuberosum HOM05D006790 ORTHO05D007715 4.3e-12 76.6 84 45.2
AL2G25680 Arabidopsis lyrata HOM05D006790 ORTHO05D007715 5.6e-12 76.3 64 50.0
CARHR059630 Cardamine hirsuta HOM05D006790 ORTHO05D007715 5.6e-12 76.3 53 56.6
HanXRQChr14g0448141 Helianthus annuus HOM05D006790 ORTHO05D007715 5.6e-12 76.3 35 80.0
Peaxi162Scf00019g00104 Petunia axillaris HOM05D006790 ORTHO05D007715 5.6e-12 76.3 38 76.3
Thhalv10018524m.g Eutrema salsugineum HOM05D006790 ORTHO05D007715 7.3e-12 75.9 64 50.0
Medtr6g016895 Medicago truncatula HOM05D006790 ORTHO05D007715 7.3e-12 75.9 52 61.5
PGR004G2315 Punica granatum HOM05D006790 ORTHO05D007715 7.3e-12 75.9 40 67.5
MSTRG.2949 Avicennia marina HOM05D006790 ORTHO05D007715 9.5e-12 75.5 36 77.8
FAN02G3906 Fragaria x ananassa HOM05D006790 ORTHO05D007715 9.5e-12 75.5 36 75.0
FAN05G5467 Fragaria x ananassa HOM05D006790 ORTHO05D007715 9.5e-12 75.5 36 75.0
FAN09G4784 Fragaria x ananassa HOM05D006790 ORTHO05D007715 9.5e-12 75.5 36 75.0
PSO063G5157 Papaver somniferum HOM05D006790 ORTHO05D007715 9.5e-12 75.5 63 50.8
Ah.09g229220 Amaranthus hybridus HOM05D006790 ORTHO05D007715 1.2e-11 75.1 39 71.8
CANSAT64G1240 Cannabis sativa HOM05D006790 ORTHO05D007715 1.2e-11 75.1 68 51.5
DCAR_007524 Daucus carota HOM05D000337 ORTHO05D007715 1.2e-11 75.1 38 73.7
Gohir.A13G150200 Gossypium hirsutum HOM05D006790 ORTHO05D007715 1.2e-11 75.1 47 61.7
Gohir.D13G154500 Gossypium hirsutum HOM05D006790 ORTHO05D007715 1.2e-11 75.1 47 61.7
Gorai.013G174500 Gossypium raimondii HOM05D006790 ORTHO05D007715 1.2e-11 75.1 47 61.7
Rhsim10G0065300 Rhododendron simsii HOM05D006790 ORTHO05D007715 1.2e-11 75.1 101 41.6
SGA_v2.0_scaffold204G41662 Striga asiatica HOM05D006790 ORTHO05D007715 1.2e-11 75.1 36 77.8
VMungo0464G1394 Vigna mungo HOM05D006790 ORTHO05D007715 1.2e-11 75.1 39 71.8
Aqoxy3G03826 Aquilegia oxysepala HOM05D006790 ORTHO05D007715 1.6e-11 74.7 55 52.7
AT1G67180 Arabidopsis thaliana HOM05D006790 ORTHO05D007715 1.6e-11 74.7 39 71.8
Carub.0002s1345 Capsella rubella HOM05D006790 ORTHO05D007715 1.6e-11 74.7 39 71.8
Cc07_g04880 Coffea canephora HOM05D006790 ORTHO05D007715 1.6e-11 74.7 168 31.5
Oeu025124.3 Olea europaea HOM05D006790 ORTHO05D007715 1.6e-11 74.7 144 36.8
Phvul.004G048500 Phaseolus vulgaris HOM05D006790 ORTHO05D007715 1.6e-11 74.7 39 71.8
Sc23g0006450 Simmondsia chinensis HOM05D006790 ORTHO05D007715 1.6e-11 74.7 140 34.3
CAN.G93.39 Capsicum annuum HOM05D006790 ORTHO05D007715 2.1e-11 74.3 39 71.8
Zm00001eb042310 Zea mays HOM05D006790 ORTHO05D007715 2.1e-11 74.3 33 87.9
PSO782G2169 Papaver somniferum HOM05D006790 ORTHO05D007715 2.8e-11 73.9 63 49.2
A02p14030 Brassica napus HOM05D006790 ORTHO05D007715 4.7e-11 73.2 82 46.3
Os08g0414200 Oryza sativa ssp. japonica HOM05D006790 ORTHO05D007715 4.7e-11 73.2 33 84.8
BcaB05g24242 Brassica carinata HOM05D006790 ORTHO05D007715 8.0e-11 72.4 82 43.9
CSS0027059 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 8.0e-11 72.4 39 69.2
CSS0043876 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 8.0e-11 72.4 39 69.2
C02p22620 Brassica napus HOM05D006790 ORTHO05D007715 1.1e-10 72.0 121 36.4
BolC2t08416H Brassica oleracea HOM05D006790 ORTHO05D007715 1.1e-10 72.0 121 36.4
BraA02t06464Z Brassica rapa HOM05D006790 ORTHO05D007715 1.1e-10 72.0 71 46.5
Psat1g062760 Pisum sativum HOM05D006790 ORTHO05D007715 1.1e-10 72.0 55 58.2
vmacro05586 Vaccinium macrocarpon HOM05D006790 ORTHO05D007715 1.1e-10 72.0 104 37.5
Lalb_Chr02g0158421 Lupinus albus HOM05D006790 ORTHO05D007715 2.3e-10 70.9 63 54.0
Sp5g22110 Schrenkiella parvula HOM05D006790 ORTHO05D007715 2.3e-10 70.9 41 68.3
HPP92_018029 Vanilla planifolia HOM05D006790 ORTHO05D007715 2.3e-10 70.9 56 55.4
BcaC03g14811 Brassica carinata HOM05D006790 ORTHO05D007715 3.1e-10 70.5 171 32.2
ATR0691G168 Amborella trichopoda HOM05D006790 ORTHO05D007715 4.0e-10 70.1 61 49.2
Zm00001eb178960 Zea mays HOM05D006790 ORTHO05D007715 5.2e-10 69.7 117 36.8
arahy.Tifrunner.gnm1.ann1.3TKD3Z Arachis hypogaea HOM05D006790 ORTHO05D007715 6.8e-10 69.3 39 66.7
arahy.Tifrunner.gnm1.ann1.9J9R5Y Arachis hypogaea HOM05D006790 ORTHO05D007715 6.8e-10 69.3 39 66.7
Lalb_Chr21g0318021 Lupinus albus HOM05D006790 ORTHO05D007715 1.2e-09 68.6 107 40.2
TPR.G9681 Trifolium pratense HOM05D006790 ORTHO05D007715 1.2e-09 68.6 182 30.8
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 4.9e-08 63.2 143 32.9
Lj2g0010226 Lotus japonicus HOM05D006790 ORTHO05D007715 1.9e-07 61.2 51 51.0
Lj2g0002333 Lotus japonicus HOM05D006790 ORTHO05D007715 9.2e-07 58.9 89 37.1


User provided reference genes

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