Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25891 Sapria himalayana HOM05D006790 ORTHO05D007715 1.9e-27 125.2 65 100.0
Sed0013505 Sechium edule HOM05D006790 ORTHO05D007715 1.0e-12 76.3 57 70.2
ClCG05G011930 Citrullus lanatus HOM05D006790 ORTHO05D007715 1.3e-12 75.9 43 86.0
Manes.01G107100 Manihot esculenta HOM05D006790 ORTHO05D007715 1.7e-12 75.5 43 83.7
CsaV3_3G020510 Cucumis sativus L. HOM05D006790 ORTHO05D007715 3.8e-12 74.3 43 83.7
MBI14_g10506_MAGBIO Magnolia biondii HOM05D006790 ORTHO05D007715 3.8e-12 74.3 58 67.2
PSO063G5157 Papaver somniferum HOM05D006790 ORTHO05D007715 5.0e-12 73.9 58 63.8
TAR371G0917 Trochodendron aralioides HOM05D006790 ORTHO05D007715 5.0e-12 73.9 43 81.4
Ciclev10011421m.g Citrus clementina HOM05D006790 ORTHO05D007715 6.5e-12 73.6 43 83.7
Dinv33908 Davidia involucrata HOM05D006790 ORTHO05D007715 6.5e-12 73.6 43 83.7
Glyma.19G042100 Glycine max HOM05D006790 ORTHO05D007715 6.5e-12 73.6 42 85.7
VMungo0464G1394 Vigna mungo HOM05D006790 ORTHO05D007715 6.5e-12 73.6 43 83.7
arahy.Tifrunner.gnm1.ann1.3TKD3Z Arachis hypogaea HOM05D006790 ORTHO05D007715 8.4e-12 73.2 43 81.4
TWI53G1762 Tripterygium wilfordii HOM05D006790 ORTHO05D007715 8.4e-12 73.2 57 70.2
Migut.H00551 Erythranthe guttata HOM05D006790 ORTHO05D007715 1.1e-11 72.8 43 76.7
Phvul.004G048500 Phaseolus vulgaris HOM05D006790 ORTHO05D007715 1.1e-11 72.8 43 81.4
PGR004G2315 Punica granatum HOM05D006790 ORTHO05D007715 1.1e-11 72.8 43 83.7
arahy.Tifrunner.gnm1.ann1.9J9R5Y Arachis hypogaea HOM05D006790 ORTHO05D007715 1.4e-11 72.4 43 81.4
Cpa.g.sc179.52 Carica papaya HOM05D006790 ORTHO05D007715 1.4e-11 72.4 56 66.1
MD17G1072100 Malus domestica HOM05D006790 ORTHO05D007715 1.4e-11 72.4 43 79.1
Aqoxy3G03826 Aquilegia oxysepala HOM05D006790 ORTHO05D007715 1.9e-11 72.0 57 64.9
Atru.chr8.778 Acer truncatum HOM05D006790 ORTHO05D007715 2.5e-11 71.6 42 81.0
CiPaw.03G006800 Carya illinoinensis HOM05D006790 ORTHO05D007715 2.5e-11 71.6 43 79.1
Hma1.2p1_0588F.1_g184410 Hydrangea macrophylla HOM05D006790 ORTHO05D007715 2.5e-11 71.6 42 83.3
Potri.004G106000 Populus trichocarpa HOM05D006790 ORTHO05D007715 2.5e-11 71.6 56 67.9
Sabra04G0076300 Salix brachista HOM05D001314 ORTHO05D001165 2.5e-11 71.6 56 67.9
CSS0027059 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 3.2e-11 71.2 43 79.1
CSS0043876 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 3.2e-11 71.2 43 79.1
Haze_14092 Corylus avellana HOM05D006790 ORTHO05D007715 3.2e-11 71.2 43 79.1
Solyc02g065620.3 Solanum lycopersicum HOM05D006790 ORTHO05D007715 4.2e-11 70.9 43 74.4
Sopen02g015820 Solanum pennellii HOM05D006790 ORTHO05D007715 4.2e-11 70.9 43 74.4
PGSC0003DMG400026556 Solanum tuberosum HOM05D006790 ORTHO05D007715 4.2e-11 70.9 43 74.4
THA.LOC104822671 Tarenaya hassleriana HOM05D006790 ORTHO05D007715 4.2e-11 70.9 57 64.9
GSVIVG01036474001 Vitis vinifera HOM05D006790 ORTHO05D007715 4.2e-11 70.9 56 64.3
Aa31LG2G3550 Aethionema arabicum HOM05D006790 ORTHO05D007715 5.5e-11 70.5 46 69.6
Prupe.3G242700 Prunus persica HOM05D006790 ORTHO05D007715 5.5e-11 70.5 43 76.7
ATR0691G168 Amborella trichopoda HOM05D006790 ORTHO05D007715 7.2e-11 70.1 59 62.7
CAN.G93.39 Capsicum annuum HOM05D006790 ORTHO05D007715 7.2e-11 70.1 43 74.4
Cfa007981 Carpinus fangiana HOM05D006790 ORTHO05D007715 7.2e-11 70.1 47 72.3
QL02p053561 Quercus lobata HOM05D006790 ORTHO05D007715 7.2e-11 70.1 43 79.1
Thecc.07G120400 Theobroma cacao HOM05D006790 ORTHO05D007715 7.2e-11 70.1 57 64.9
Thhalv10018524m.g Eutrema salsugineum HOM05D006790 ORTHO05D007715 1.2e-10 69.3 42 78.6
Nn3g17634 Nelumbo nucifera HOM05D006790 ORTHO05D007715 1.2e-10 69.3 43 76.7
Carub.0002s1345 Capsella rubella HOM05D006790 ORTHO05D007715 1.6e-10 68.9 42 78.6
CARHR059630 Cardamine hirsuta HOM05D006790 ORTHO05D007715 1.6e-10 68.9 57 64.9
Nitab4.5_0001324g0030 Nicotiana tabacum HOM05D006790 ORTHO05D007715 1.6e-10 68.9 43 72.1
Oeu025124.3 Olea europaea HOM05D006790 ORTHO05D007715 1.6e-10 68.9 42 76.2
AL2G25680 Arabidopsis lyrata HOM05D006790 ORTHO05D007715 2.1e-10 68.6 42 78.6
Sp5g22110 Schrenkiella parvula HOM05D006790 ORTHO05D007715 2.1e-10 68.6 42 78.6
BcaB05g24242 Brassica carinata HOM05D006790 ORTHO05D007715 2.7e-10 68.2 42 78.6
BcaC03g14811 Brassica carinata HOM05D006790 ORTHO05D007715 2.7e-10 68.2 42 78.6
BcaNung06915 Brassica carinata HOM05D006790 ORTHO05D007715 2.7e-10 68.2 42 78.6
A02p14030 Brassica napus HOM05D006790 ORTHO05D007715 2.7e-10 68.2 42 78.6
C02p22620 Brassica napus HOM05D006790 ORTHO05D007715 2.7e-10 68.2 42 78.6
BolC2t08416H Brassica oleracea HOM05D006790 ORTHO05D007715 2.7e-10 68.2 42 78.6
BraA02t06464Z Brassica rapa HOM05D006790 ORTHO05D007715 2.7e-10 68.2 42 78.6
Duzib268G0872 Durio zibethinus HOM05D006790 ORTHO05D007715 2.7e-10 68.2 57 63.2
Lj7A8G40 Lonicera japonica HOM05D006790 ORTHO05D007715 3.5e-10 67.8 59 57.6
Psat1g062760 Pisum sativum HOM05D006790 ORTHO05D007715 3.5e-10 67.8 43 76.7
Rhsim10G0065300 Rhododendron simsii HOM05D006790 ORTHO05D007715 3.5e-10 67.8 42 76.2
CDE10G1039 Ceratophyllum demersum HOM05D006790 ORTHO05D007715 4.6e-10 67.4 43 74.4
Lsat_1_v5_gn_2_86460 Lactuca sativa HOM05D006790 ORTHO05D007715 4.6e-10 67.4 56 60.7
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 7.9e-10 66.6 57 63.2
Peaxi162Scf00019g00104 Petunia axillaris HOM05D006790 ORTHO05D007715 7.9e-10 66.6 42 71.4
SGA_v2.0_scaffold204G41662 Striga asiatica HOM05D006790 ORTHO05D007715 7.9e-10 66.6 58 56.9
CiPaw.04G004400 Carya illinoinensis HOM05D006790 ORTHO05D007715 1.0e-09 66.2 42 71.4
Os08g0414200 Oryza sativa ssp. japonica HOM05D006790 ORTHO05D007715 1.0e-09 66.2 58 58.6
Cc07_g04880 Coffea canephora HOM05D006790 ORTHO05D007715 1.3e-09 65.9 54 63.0
Hund19591 Selenicereus undatus HOM05D006790 ORTHO05D007715 1.3e-09 65.9 54 63.0
Sc23g0006450 Simmondsia chinensis HOM05D006790 ORTHO05D007715 1.3e-09 65.9 43 74.4
HPP92_018029 Vanilla planifolia HOM05D006790 ORTHO05D007715 1.3e-09 65.9 57 59.6
Gohir.A13G150200 Gossypium hirsutum HOM05D006790 ORTHO05D007715 1.8e-09 65.5 57 59.6
MSTRG.2949 Avicennia marina HOM05D006790 ORTHO05D007715 2.3e-09 65.1 43 69.8
Zm00001eb042310 Zea mays HOM05D006790 ORTHO05D007715 2.3e-09 65.1 58 58.6
Eucgr.I02104 Eucalyptus grandis HOM05D006790 ORTHO05D007715 3.0e-09 64.7 56 60.7
Gohir.D13G154500 Gossypium hirsutum HOM05D006790 ORTHO05D007715 3.0e-09 64.7 57 59.6
Lj2g0010226 Lotus japonicus HOM05D006790 ORTHO05D007715 3.0e-09 64.7 57 59.6
DCAR_007524 Daucus carota HOM05D000337 ORTHO05D007715 3.9e-09 64.3 59 57.6
Medtr6g016895 Medicago truncatula HOM05D006790 ORTHO05D007715 3.9e-09 64.3 57 61.4
Actinidia18110 Actinidia chinensis HOM05D006790 ORTHO05D007715 8.7e-09 63.2 43 72.1
Actinidia36298 Actinidia chinensis HOM05D006790 ORTHO05D007715 8.7e-09 63.2 43 72.1
COL.COLO4_17521 Corchorus olitorius HOM05D006790 ORTHO05D007715 8.7e-09 63.2 44 70.5
Lj2g0002333 Lotus japonicus HOM05D006790 ORTHO05D007715 1.5e-08 62.4 38 73.7
Lalb_Chr02g0158421 Lupinus albus HOM05D006790 ORTHO05D007715 1.5e-08 62.4 58 60.3
Ah.09g229220 Amaranthus hybridus HOM05D006790 ORTHO05D007715 1.9e-08 62.0 43 65.1
ECA238G0674 Erigeron canadensis HOM05D000337 ORTHO05D007715 1.9e-08 62.0 42 64.3
HanXRQChr14g0448141 Helianthus annuus HOM05D006790 ORTHO05D007715 1.9e-08 62.0 56 58.9
unitig_736.g22259 Utricularia gibba HOM05D006790 ORTHO05D007715 1.9e-08 62.0 57 54.4
AUR62012471 Chenopodium quinoa HOM05D006790 ORTHO05D007715 1.3e-07 59.3 43 67.4
EL10Ac2g04125 Beta vulgaris HOM05D006790 ORTHO05D007715 2.2e-07 58.5 43 65.1
Lalb_Chr21g0318021 Lupinus albus HOM05D006790 ORTHO05D007715 2.2e-07 58.5 43 72.1
AUR62031597 Chenopodium quinoa HOM05D006790 ORTHO05D007715 2.8e-07 58.2 43 65.1
CANSAT64G1240 Cannabis sativa HOM05D006790 ORTHO05D007715 4.8e-07 57.4 42 61.9
Pp3c17_13020 Physcomitrium patens HOM05D006790 ORTHO05D007715 1.4e-06 55.8 43 58.1
Lj2g0000339 Lotus japonicus HOM05D006790 ORTHO05D007715 3.1e-06 54.7 57 49.1


User provided reference genes

Program Settings