Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25849 Sapria himalayana HOM05D005170 ORTHO05D006985 0.0e+00 1228.8 639 100.0
Sabra04G0072900 Salix brachista HOM05D005170 ORTHO05D006985 1.0e-122 444.9 537 49.3
Manes.01G104800 Manihot esculenta HOM05D005170 ORTHO05D006985 3.4e-121 439.9 538 50.9
Potri.004G111500 Populus trichocarpa HOM05D005170 ORTHO05D006985 1.3e-120 438.0 537 48.8
Actinidia36275 Actinidia chinensis HOM05D005170 ORTHO05D006985 2.6e-113 413.7 541 47.1
Lj4A126T71 Lonicera japonica HOM05D005170 ORTHO05D006985 1.7e-112 411.0 562 47.0
Dinv34895 Davidia involucrata HOM05D005170 ORTHO05D006985 2.9e-112 410.2 535 48.2
Cfa007711 Carpinus fangiana HOM05D005170 ORTHO05D006985 1.6e-110 404.4 535 47.1
CiPaw.03G081400 Carya illinoinensis HOM05D005170 ORTHO05D006985 7.8e-110 402.1 540 47.4
TWI34G1112 Tripterygium wilfordii HOM05D005170 ORTHO05D006985 2.1e-107 394.0 555 46.8
vmacro05605 Vaccinium macrocarpon HOM05D005170 ORTHO05D006985 4.7e-107 392.9 534 46.4
Ciclev10011153m.g Citrus clementina HOM05D005170 ORTHO05D006985 1.4e-106 391.3 537 46.4
CANSAT64G0674 Cannabis sativa HOM05D005170 ORTHO05D006985 3.1e-106 390.2 538 46.5
Cpa.g.sc14.254 Carica papaya HOM05D005170 ORTHO05D006985 3.4e-105 386.7 572 44.4
Prupe.3G247200 Prunus persica HOM05D005170 ORTHO05D006985 3.4e-105 386.7 540 47.0
GSVIVG01036517001 Vitis vinifera HOM05D005170 ORTHO05D006985 4.4e-105 386.3 538 47.0
Nitab4.5_0002978g0100 Nicotiana tabacum HOM05D005170 ORTHO05D006985 2.9e-104 383.6 538 45.5
Hund16252 Selenicereus undatus HOM05D005170 ORTHO05D006985 4.9e-104 382.9 537 44.5
PGR004G2610 Punica granatum HOM05D005170 ORTHO05D006985 4.1e-103 379.8 535 46.0
Sc11g0008940 Simmondsia chinensis HOM05D005170 ORTHO05D006985 7.1e-103 379.0 540 46.3
Lalb_Chr10g0092611 Lupinus albus HOM05D005170 ORTHO05D006985 2.1e-102 377.5 556 44.4
CSS0017694 Camellia sinensis var. sinensis HOM05D005170 ORTHO05D006985 6.0e-102 375.9 538 44.2
CSS0024263 Camellia sinensis var. sinensis HOM05D005170 ORTHO05D006985 6.0e-102 375.9 538 44.2
Thecc.04G110100 Theobroma cacao HOM05D005170 ORTHO05D006985 1.0e-101 375.2 535 45.8
Gorai.001G206200 Gossypium raimondii HOM05D005170 ORTHO05D006985 1.7e-101 374.4 537 45.4
Cc07_g04630 Coffea canephora HOM05D005170 ORTHO05D006985 5.1e-101 372.9 545 44.4
Gohir.D07G185600 Gossypium hirsutum HOM05D005170 ORTHO05D006985 5.1e-101 372.9 538 45.5
CAN.G497.45 Capsicum annuum HOM05D005170 ORTHO05D006985 6.6e-101 372.5 538 45.2
ClCG07G016130 Citrullus lanatus HOM05D005170 ORTHO05D006985 1.1e-100 371.7 555 45.4
PGSC0003DMG400001473 Solanum tuberosum HOM05D005170 ORTHO05D006985 1.9e-100 370.9 535 44.1
Sed0018763 Sechium edule HOM05D005170 ORTHO05D006985 3.3e-100 370.2 548 44.9
Nitab4.5_0002171g0080 Nicotiana tabacum HOM05D005170 ORTHO05D006985 4.3e-100 369.8 557 44.0
Rhsim10G0060500 Rhododendron simsii HOM05D005170 ORTHO05D006985 1.6e-99 367.9 534 44.6
Gohir.A07G178500 Gossypium hirsutum HOM05D005170 ORTHO05D006985 2.8e-99 367.1 536 45.1
AUR62023134 Chenopodium quinoa HOM05D005170 ORTHO05D006985 3.6e-99 366.7 605 41.2
Solyc02g089360.4 Solanum lycopersicum HOM05D005170 ORTHO05D006985 3.6e-99 366.7 539 44.3
Sopen02g034140 Solanum pennellii HOM05D005170 ORTHO05D006985 3.1e-98 363.6 537 43.9
MELO3C018906.2 Cucumis melo HOM05D005170 ORTHO05D006985 4.0e-98 363.2 550 45.5
Eucgr.I02082 Eucalyptus grandis HOM05D005170 ORTHO05D006985 6.9e-98 362.5 538 45.9
arahy.Tifrunner.gnm1.ann1.3DLK77 Arachis hypogaea HOM05D005170 ORTHO05D006985 2.6e-97 360.5 563 43.3
CsaV3_4G009930 Cucumis sativus L. HOM05D005170 ORTHO05D006985 3.4e-97 360.1 553 44.8
arahy.Tifrunner.gnm1.ann1.66GFWV Arachis hypogaea HOM05D005170 ORTHO05D006985 4.4e-97 359.8 560 44.3
Ah.16g100870 Amaranthus hybridus HOM05D005170 ORTHO05D006985 5.8e-97 359.4 544 42.1
Migut.H00575 Erythranthe guttata HOM05D005170 ORTHO05D006985 7.6e-97 359.0 547 44.6
Oeu062190.2 Olea europaea HOM05D005170 ORTHO05D006985 1.7e-96 357.8 567 43.2
vmacro17105 Vaccinium macrocarpon HOM05D005170 ORTHO05D006985 1.4e-95 354.8 520 44.6
Glyma.08G253900 Glycine max HOM05D005170 ORTHO05D006985 4.2e-95 353.2 560 44.1
THA.LOC104805534 Tarenaya hassleriana HOM05D005170 ORTHO05D006985 4.2e-95 353.2 539 44.3
ECA246G1099 Erigeron canadensis HOM05D005170 ORTHO05D006985 1.2e-94 351.7 534 43.4
EL10Ac2g04408 Beta vulgaris HOM05D005170 ORTHO05D006985 2.1e-94 350.9 549 42.3
Glyma.18G276300 Glycine max HOM05D005170 ORTHO05D006985 2.1e-94 350.9 561 43.9
VMungo1383G1046 Vigna mungo HOM05D005170 ORTHO05D006985 4.6e-94 349.7 558 43.2
Lj1g0005667 Lotus japonicus HOM05D005170 ORTHO05D006985 1.5e-92 344.7 578 43.8
Medtr7g017500 Medicago truncatula HOM05D005170 ORTHO05D006985 4.3e-92 343.2 567 42.0
MSTRG.2967 Avicennia marina HOM05D005170 ORTHO05D006985 5.6e-92 342.8 546 44.1
RcHm_v2.0_Chr2g0164481 Rosa chinensis HOM05D005170 ORTHO05D006985 5.6e-92 342.8 538 43.7
RcHm_v2.0_Chr2g0164441 Rosa chinensis HOM05D005170 ORTHO05D006985 7.3e-92 342.4 538 43.7
ATR0691G089 Amborella trichopoda HOM05D005170 ORTHO05D006985 1.3e-91 341.7 577 41.8
DCAR_007542 Daucus carota HOM05D005170 ORTHO05D006985 1.3e-91 341.7 546 42.7
Nn4g23569 Nelumbo nucifera HOM05D005170 ORTHO05D006985 1.6e-91 341.3 537 43.9
FvH4_6g46110 Fragaria vesca HOM05D005170 ORTHO05D006985 2.1e-91 340.9 546 44.1
AUR62009453 Chenopodium quinoa HOM05D005170 ORTHO05D006985 6.2e-91 339.3 537 43.9
Phvul.008G024500 Phaseolus vulgaris HOM05D005170 ORTHO05D006985 6.2e-91 339.3 561 44.4
Aqoxy3G03767 Aquilegia oxysepala HOM05D005170 ORTHO05D006985 8.1e-91 339.0 559 42.2
TPR.G3272 Trifolium pratense HOM05D005170 ORTHO05D006985 3.1e-90 337.0 577 41.6
SGA_v2.0_scaffold52G19060 Striga asiatica HOM05D005170 ORTHO05D006985 5.3e-90 336.3 550 42.4
Ca_06959_v3 Cicer arietinum L. HOM05D005170 ORTHO05D006985 9.9e-89 332.0 557 42.5
CARHR263780 Cardamine hirsuta HOM05D005170 ORTHO05D006985 8.4e-88 328.9 543 41.6
Aa31LG9G16850 Aethionema arabicum HOM05D005170 ORTHO05D006985 2.4e-87 327.4 548 41.1
Psat3g194480 Pisum sativum HOM05D005170 ORTHO05D006985 3.2e-87 327.0 575 39.7
Lsat_1_v5_gn_3_95261 Lactuca sativa HOM05D005170 ORTHO05D006985 7.1e-87 325.9 540 42.4
Hma1.2p1_2186F.1_g316400 Hydrangea macrophylla HOM05D005170 ORTHO05D006985 9.3e-87 325.5 530 41.3
MD09G1076900 Malus domestica HOM05D005170 ORTHO05D006985 1.6e-86 324.7 540 42.0
Carub.0007s3703 Capsella rubella HOM05D005170 ORTHO05D006985 2.1e-86 324.3 540 41.7
HPP92_019180 Vanilla planifolia HOM05D005170 ORTHO05D006985 3.0e-85 320.5 539 41.9
CDE02G1515 Ceratophyllum demersum HOM05D005170 ORTHO05D006985 8.7e-85 318.9 544 42.5
Zm00001eb380550 Zea mays HOM05D005170 ORTHO05D006985 2.5e-84 317.4 538 41.3
PSO063G4379 Papaver somniferum HOM05D005170 ORTHO05D006985 8.1e-83 312.4 536 41.4
vmacro23470 Vaccinium macrocarpon HOM05D005170 ORTHO05D006985 1.4e-82 311.6 520 41.9
AT5G38840 Arabidopsis thaliana HOM05D005170 ORTHO05D006985 1.8e-82 311.2 542 39.9
BcaB06g27252 Brassica carinata HOM05D005170 ORTHO05D006985 1.8e-82 311.2 542 39.5
BcaC02g09673 Brassica carinata HOM05D005170 ORTHO05D006985 2.0e-81 307.8 546 39.4
C04p45420 Brassica napus HOM05D005170 ORTHO05D006985 2.0e-81 307.8 546 39.4
BolC4t26124H Brassica oleracea HOM05D005170 ORTHO05D006985 2.0e-81 307.8 546 39.4
COL.COLO4_00229 Corchorus olitorius HOM05D005170 ORTHO05D006985 2.0e-81 307.8 541 41.2
Thhalv10027659m.g Eutrema salsugineum HOM05D005170 ORTHO05D006985 2.0e-81 307.8 542 41.9
PSO782G1791 Papaver somniferum HOM05D005170 ORTHO05D006985 3.4e-81 307.0 536 41.0
A04p11710 Brassica napus HOM05D005170 ORTHO05D006985 4.5e-81 306.6 547 39.9
BraA04t16838Z Brassica rapa HOM05D005170 ORTHO05D006985 4.5e-81 306.6 547 39.9
PSO339G2512 Papaver somniferum HOM05D005170 ORTHO05D006985 1.3e-80 305.1 542 38.9
HanXRQChr12g0380201 Helianthus annuus HOM05D005170 ORTHO05D006985 2.9e-80 303.9 539 39.7
Os06g0275900 Oryza sativa ssp. japonica HOM05D005170 ORTHO05D006985 3.8e-80 303.5 537 40.0
AL7G51600 Arabidopsis lyrata HOM05D005170 ORTHO05D006985 4.2e-79 300.1 442 44.3
Peaxi162Scf00020g02131 Petunia axillaris HOM05D005170 ORTHO05D006985 1.0e-77 295.4 536 39.4
Sp7g03070 Schrenkiella parvula HOM05D005170 ORTHO05D006985 2.7e-70 270.8 443 42.9
QL02p064885 Quercus lobata HOM05D005170 ORTHO05D006985 1.0e-69 268.9 409 43.0
unitig_899.g15113 Utricularia gibba HOM05D005170 ORTHO05D006985 1.0e-69 268.9 547 37.7
FAN05G5078 Fragaria x ananassa HOM05D005170 ORTHO05D006985 3.9e-69 266.9 542 38.6
FAN02G2580 Fragaria x ananassa HOM05D005170 ORTHO05D006985 7.4e-68 262.7 549 37.9
FAN14G1739 Fragaria x ananassa HOM05D005170 ORTHO05D006985 7.4e-68 262.7 545 38.0
FAN09G2425 Fragaria x ananassa HOM05D005170 ORTHO05D006985 9.7e-68 262.3 546 37.7
TAR629G3016 Trochodendron aralioides HOM05D005170 ORTHO05D006985 6.9e-66 256.1 299 52.5
Hma1.2p1_2186F.1_g316390 Hydrangea macrophylla HOM05D005170 ORTHO05D006985 2.2e-51 208.0 210 56.2
Pp3c14_10960 Physcomitrium patens HOM05D005170 ORTHO05D006985 2.9e-48 197.6 533 33.0
Mapoly0045s0050 Marchantia polymorpha HOM05D005170 ORTHO05D006985 5.5e-47 193.4 539 30.8
AagrBONN_evm.TU.Sc2ySwM_344.2160 Anthoceros agrestis HOM05D005170 ORTHO05D006985 2.9e-40 171.0 586 29.9
arahy.Tifrunner.gnm1.ann1.QEN3W4 Arachis hypogaea HOM05D005170 ORTHO05D006985 7.2e-39 166.4 367 36.0
QL02p064873 Quercus lobata HOM05D005170 ORTHO05D006985 3.5e-33 147.5 130 62.3
arahy.Tifrunner.gnm1.ann1.87D3N1 Arachis hypogaea HOM05D005170 ORTHO05D006985 6.5e-32 143.3 380 35.3
CBR_g66794 Chara braunii HOM05D005170 ORTHO05D006985 8.5e-32 142.9 315 37.1
arahy.Tifrunner.gnm1.ann1.NM7AU0 Arachis hypogaea HOM05D005170 ORTHO05D006985 2.8e-27 127.9 340 34.4
arahy.Tifrunner.gnm1.ann1.5GV78D Arachis hypogaea HOM05D005170 ORTHO05D006985 3.3e-15 87.8 197 33.0
SEGI_21333 Sequoiadendron giganteum HOM05D005170 ORTHO05D006985 1.2e-14 85.9 118 44.9
Actinidia18094 Actinidia chinensis HOM05D005170 ORTHO05D006985 2.1e-14 85.1 135 39.3
SEGI_17824 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.7e-11 75.5 305 28.2
PRCOL_00001445 Prasinoderma coloniale HOM05D005170 ORTHO05D006985 6.4e-11 73.6 270 26.7
Cre03.g152450 Chlamydomonas reinhardtii HOM05D005170 ORTHO05D006985 1.0e-08 66.2 124 36.3
SEGI_00884 Sequoiadendron giganteum HOM05D005170 ORTHO05D006985 1.7e-08 65.5 159 35.2
arahy.Tifrunner.gnm1.ann1.ASZ0YV Arachis hypogaea HOM05D005170 ORTHO05D006985 4.7e-06 57.4 109 36.7
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 6.2e-06 57.0 72 41.7


User provided reference genes

Program Settings