Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 3.0e-156 555.1 267 100.0
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 8.1e-85 317.8 245 61.2
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 8.9e-84 314.3 245 61.6
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.5e-83 313.5 245 60.4
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.4e-83 312.0 245 60.4
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 4.4e-83 312.0 245 60.4
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.8e-83 311.6 245 60.4
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 1.1e-81 307.4 245 60.0
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.1e-81 307.4 249 59.0
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 1.4e-81 307.0 245 59.2
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 3.2e-81 305.8 245 60.8
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 5.4e-81 305.1 249 59.8
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 7.1e-81 304.7 245 59.6
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 1.2e-80 303.9 249 59.0
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 1.6e-80 303.5 250 58.8
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 4.6e-80 302.0 245 58.0
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 6.0e-80 301.6 245 57.1
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.0e-79 300.8 245 60.4
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 1.7e-79 300.1 245 57.6
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 2.3e-79 299.7 249 59.4
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 3.0e-79 299.3 245 58.8
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 6.6e-79 298.1 244 57.8
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 1.9e-78 296.6 247 57.9
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 1.9e-78 296.6 245 59.2
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 2.5e-78 296.2 245 58.4
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.5e-78 296.2 245 58.4
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 2.5e-78 296.2 251 56.2
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 3.3e-78 295.8 247 57.5
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 7.3e-78 294.7 245 58.8
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 9.6e-78 294.3 245 58.0
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 9.6e-78 294.3 251 54.2
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 9.6e-78 294.3 245 58.8
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.3e-77 293.9 245 58.0
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.1e-77 293.1 245 58.0
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 4.8e-77 292.0 245 58.4
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 4.8e-77 292.0 245 56.3
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 4.8e-77 292.0 248 57.3
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 8.1e-77 291.2 245 58.0
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 8.1e-77 291.2 251 55.4
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 8.1e-77 291.2 246 56.9
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 1.1e-76 290.8 245 58.4
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 3.1e-76 289.3 244 56.6
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.0e-76 288.9 249 55.0
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 4.0e-76 288.9 245 55.1
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 5.3e-76 288.5 245 55.9
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 9.0e-76 287.7 251 54.6
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 1.2e-75 287.3 256 53.5
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 1.2e-75 287.3 245 56.3
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 1.5e-75 287.0 246 56.1
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 2.0e-75 286.6 248 54.4
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 5.8e-75 285.0 245 55.9
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 9.9e-75 284.3 251 53.4
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 9.9e-75 284.3 251 53.8
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 1.3e-74 283.9 246 56.1
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 1.3e-74 283.9 246 55.3
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.7e-74 283.5 246 56.1
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 2.2e-74 283.1 246 55.7
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 3.8e-74 282.3 251 54.2
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 3.8e-74 282.3 246 55.7
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 4.9e-74 282.0 245 54.7
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 1.9e-73 280.0 249 57.4
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 3.2e-73 279.3 249 56.2
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 4.2e-73 278.9 250 54.0
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 4.2e-73 278.9 245 55.1
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 5.4e-73 278.5 245 54.3
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 9.3e-73 277.7 251 53.0
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 2.1e-72 276.6 244 55.3
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 2.7e-72 276.2 245 55.9
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 3.5e-72 275.8 249 53.0
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 3.5e-72 275.8 249 53.8
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 6.0e-72 275.0 244 52.5
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 6.0e-72 275.0 251 53.0
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 1.7e-71 273.5 247 55.5
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 5.1e-71 271.9 247 53.4
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 3.3e-70 269.2 244 54.1
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 7.3e-70 268.1 248 53.2
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 7.3e-70 268.1 247 53.0
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.1e-69 266.5 244 53.7
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 2.8e-69 266.2 250 52.0
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 6.2e-69 265.0 249 51.0
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 1.4e-68 263.8 247 53.0
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 1.4e-68 263.8 246 52.8
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 2.4e-68 263.1 261 50.6
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 5.3e-68 261.9 250 51.6
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 6.9e-68 261.5 247 53.4
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 6.9e-68 261.5 247 53.4
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 6.9e-68 261.5 247 53.4
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 6.9e-68 261.5 247 53.4
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 6.9e-68 261.5 247 53.4
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 1.2e-67 260.8 227 56.8
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 1.2e-67 260.8 237 54.4
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 1.5e-67 260.4 247 52.2
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 2.0e-67 260.0 249 50.6
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 2.0e-67 260.0 245 51.4
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 2.2e-66 256.5 247 52.2
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 2.2e-66 256.5 247 51.8
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 8.4e-66 254.6 247 51.4
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 8.4e-66 254.6 250 49.6
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 9.3e-65 251.1 248 48.0
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 1.4e-60 237.3 248 48.0
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 3.1e-60 236.1 199 56.3
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 5.8e-59 231.9 245 47.3
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.7e-58 230.3 246 49.2
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 4.9e-58 228.8 246 48.8
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 1.1e-57 227.6 250 46.0
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.3e-53 214.2 252 42.9
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 4.2e-49 199.1 266 42.5
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 5.3e-44 182.2 258 41.9
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.6e-40 170.6 142 54.2
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 7.9e-40 168.3 284 37.7
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 8.8e-39 164.9 135 60.7
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 6.1e-32 142.1 98 70.4
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 2.0e-30 137.1 107 56.1
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 2.0e-22 110.5 94 56.4
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 2.5e-17 93.6 71 54.9
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 8.8e-15 85.1 91 52.7
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 1.2e-14 84.7 151 39.7
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 2.2e-13 80.5 54 59.3
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 1.2e-11 74.7 51 58.8
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 4.7e-08 62.8 148 32.4
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 3.0e-07 60.1 136 30.9
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 1.2e-06 58.2 100 40.0
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 2.6e-06 57.0 45 48.9
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 9.8e-06 55.1 94 39.4


User provided reference genes

Program Settings