Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 3.5e-126 454.9 218 100.0
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 5.4e-79 298.1 200 72.5
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 2.7e-78 295.8 199 73.4
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 1.0e-77 293.9 208 67.3
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 3.0e-77 292.4 177 76.3
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 3.3e-76 288.9 181 74.6
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 3.3e-76 288.9 194 69.6
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 2.1e-75 286.2 197 69.0
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 8.1e-75 284.3 207 64.3
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 1.1e-74 283.9 206 66.0
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 1.4e-74 283.5 196 67.3
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 1.8e-74 283.1 198 68.2
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 2.4e-74 282.7 205 66.3
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 3.1e-74 282.3 196 67.3
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 4.0e-74 282.0 178 73.6
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 5.2e-74 281.6 201 67.2
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 6.9e-74 281.2 198 67.7
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 1.2e-73 280.4 193 67.9
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 1.5e-73 280.0 189 70.4
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 2.6e-73 279.3 192 70.3
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 3.4e-73 278.9 208 64.9
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 9.9e-73 277.3 182 69.8
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 1.3e-72 276.9 180 70.6
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 1.7e-72 276.6 186 68.3
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 4.9e-72 275.0 167 75.4
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 4.9e-72 275.0 173 72.3
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 6.4e-72 274.6 193 67.4
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 6.4e-72 274.6 193 67.4
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 8.4e-72 274.2 197 68.0
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 1.4e-71 273.5 193 65.8
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 1.4e-71 273.5 184 67.9
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 1.9e-71 273.1 183 69.9
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 1.9e-71 273.1 193 67.9
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 2.4e-71 272.7 183 69.9
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 3.2e-71 272.3 199 65.3
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 4.2e-71 271.9 189 69.3
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 4.2e-71 271.9 192 68.2
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 5.4e-71 271.6 193 68.4
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 5.4e-71 271.6 193 68.4
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 5.4e-71 271.6 194 65.5
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 7.1e-71 271.2 193 65.8
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 9.3e-71 270.8 192 67.7
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 9.3e-71 270.8 169 73.4
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 1.2e-70 270.4 198 65.7
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.2e-70 270.4 181 69.1
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.2e-70 270.4 181 69.1
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 2.7e-70 269.2 195 65.1
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 2.7e-70 269.2 178 70.2
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 3.5e-70 268.9 198 64.1
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 4.6e-70 268.5 201 62.7
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 4.6e-70 268.5 199 65.8
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 1.7e-69 266.5 188 67.0
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 2.3e-69 266.2 211 64.0
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 2.3e-69 266.2 211 64.0
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 2.3e-69 266.2 193 65.3
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 2.3e-69 266.2 193 64.8
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 3.0e-69 265.8 188 67.0
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 3.9e-69 265.4 173 72.3
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 8.7e-69 264.2 194 62.9
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.1e-68 263.8 197 62.9
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 1.1e-68 263.8 197 62.9
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 1.1e-68 263.8 197 63.5
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 1.5e-68 263.5 165 74.5
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.5e-68 263.5 201 62.7
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.9e-68 263.1 197 62.9
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.9e-68 263.1 201 62.7
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 1.9e-68 263.1 206 61.7
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 2.5e-68 262.7 201 61.7
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 2.5e-68 262.7 179 68.7
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 2.5e-68 262.7 211 60.2
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 3.3e-68 262.3 207 63.3
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 4.3e-68 261.9 196 65.8
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 4.3e-68 261.9 204 60.8
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 4.3e-68 261.9 198 62.6
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 5.6e-68 261.5 196 62.8
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 7.3e-68 261.2 192 65.1
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 1.3e-67 260.4 173 69.4
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 2.1e-67 259.6 200 60.5
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 2.8e-67 259.2 199 63.8
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 2.8e-67 259.2 206 63.1
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 1.1e-66 257.3 180 67.2
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 3.1e-66 255.8 194 62.9
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 4.5e-65 251.9 198 61.6
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 4.5e-65 251.9 178 67.4
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 5.8e-65 251.5 197 58.9
SalBow1G8695 Salvia bowleyana HOM05D005581 ORTHO05D006792 9.9e-65 250.8 205 60.5
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 1.3e-64 250.4 217 58.5
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 1.3e-64 250.4 165 66.1
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.7e-64 250.0 209 58.9
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 1.7e-64 250.0 196 61.2
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 6.4e-64 248.1 169 63.9
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 4.2e-63 245.4 190 63.7
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 4.2e-63 245.4 199 61.8
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 1.2e-62 243.8 205 57.1
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 2.7e-62 242.7 173 63.6
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 7.9e-62 241.1 190 62.6
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 1.0e-61 240.7 182 63.7
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 8.7e-61 237.7 188 56.9
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 1.9e-60 236.5 178 64.0
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 9.6e-60 234.2 178 64.0
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 9.6e-60 234.2 189 60.8
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 4.8e-59 231.9 219 53.4
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 8.1e-59 231.1 194 60.3
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 1.1e-58 230.7 146 71.2
MD09G1040100 Malus domestica HOM05D005581 ORTHO05D006792 1.4e-58 230.3 309 41.7
BcaB06g27424 Brassica carinata HOM05D005581 ORTHO05D006792 4.0e-58 228.8 196 59.7
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 5.3e-58 228.4 184 61.4
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 6.9e-58 228.0 194 58.8
THA.LOC104823921 Tarenaya hassleriana HOM05D005581 ORTHO05D006792 3.4e-57 225.7 196 58.7
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 4.5e-57 225.3 176 62.5
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 8.4e-56 221.1 188 57.4
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 8.4e-56 221.1 188 57.4
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 8.4e-56 221.1 153 66.7
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 1.1e-55 220.7 188 58.0
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 2.4e-55 219.5 188 56.9
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 7.1e-55 218.0 184 59.8
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 1.6e-54 216.9 166 59.6
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 1.6e-54 216.9 165 59.4
Psat3g011960 Pisum sativum HOM05D005581 ORTHO05D006792 7.4e-52 208.0 139 71.9
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 8.1e-51 204.5 129 72.1
Haze_14640 Corylus avellana HOM05D005581 ORTHO05D006792 2.0e-49 199.9 138 70.3
Mapoly0035s0056 Marchantia polymorpha HOM05D005581 ORTHO05D006792 1.7e-48 196.8 164 55.5
Cc07_g02660 Coffea canephora HOM05D005581 ORTHO05D006792 4.2e-47 192.2 130 69.2
Aa31LG9G1540 Aethionema arabicum HOM05D005581 ORTHO05D006792 7.9e-46 188.0 154 61.0
Pp3c1_40840 Physcomitrium patens HOM05D005581 ORTHO05D006792 2.3e-45 186.4 165 51.5
CBR_g36833 Chara braunii HOM05D005581 ORTHO05D006792 7.6e-41 171.4 166 47.0
Migut.N00270 Erythranthe guttata HOM05D005581 ORTHO05D006792 4.1e-34 149.1 168 48.8
MSTRG.21916 Avicennia marina HOM05D005581 ORTHO05D006792 4.5e-33 145.6 146 53.4
PRCOL_00005184 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 2.2e-32 143.3 169 42.0
Cre10.g440700 Chlamydomonas reinhardtii HOM05D005581 ORTHO05D006792 4.2e-31 139.0 195 34.9
Migut.H00162 Erythranthe guttata HOM05D005581 ORTHO05D006792 2.1e-30 136.7 159 44.7
Migut.H00166 Erythranthe guttata HOM05D005581 ORTHO05D006792 3.9e-29 132.5 159 45.3
SalBow3G2496 Salvia bowleyana HOM05D005581 ORTHO05D006792 9.4e-23 111.3 166 40.4
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 1.2e-22 110.9 78 62.8
PRCOL_00002387 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 5.3e-18 95.5 165 33.9
HPP92_018422 Vanilla planifolia HOM05D005581 ORTHO05D006792 1.6e-14 84.0 54 61.1
CDE06G0755 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 5.7e-12 75.5 107 43.0
HanXRQChr17g0548091 Helianthus annuus HOM05D005581 ORTHO05D006792 7.5e-12 75.1 58 56.9
MBI15_g46244_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 1.1e-10 71.2 59 59.3
arahy.Tifrunner.gnm1.ann1.C3UJQ4 Arachis hypogaea HOM05D005581 ORTHO05D006792 5.3e-10 68.9 70 50.0
Aa31LG8G7840 Aethionema arabicum HOM05D003731 ORTHO05D004429 7.2e-07 58.5 141 31.9
Sp1g38210 Schrenkiella parvula HOM05D003731 ORTHO05D004429 9.4e-07 58.2 165 29.1
A05p27580 Brassica napus HOM05D003731 ORTHO05D004429 2.7e-06 56.6 121 33.1
C05p42680 Brassica napus HOM05D003731 ORTHO05D004429 2.7e-06 56.6 121 33.1
BolC5t32990H Brassica oleracea HOM05D003731 ORTHO05D004429 2.7e-06 56.6 121 33.1
BraA05t21647Z Brassica rapa HOM05D003731 ORTHO05D004429 2.7e-06 56.6 121 33.1
Thhalv10011555m.g Eutrema salsugineum HOM05D003731 ORTHO05D004429 3.6e-06 56.2 131 29.8


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