Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25497 Sapria himalayana HOM05D001482 ORTHO05D017727 1.3e-125 453.4 287 100.0
Manes.17G113600 Manihot esculenta HOM05D001482 ORTHO05D001499 3.6e-14 83.2 135 75.6
Manes.15G149300 Manihot esculenta HOM05D001482 ORTHO05D001499 1.0e-13 81.6 136 70.6
Haze_14697 Corylus avellana HOM05D001482 ORTHO05D001499 2.0e-12 77.4 172 34.9
TWI36G1733 Tripterygium wilfordii HOM05D001482 ORTHO05D001499 7.5e-12 75.5 131 67.2
CiPaw.04G026200 Carya illinoinensis HOM05D001482 ORTHO05D001499 3.7e-11 73.2 150 34.7
Lj2g0010471 Lotus japonicus HOM05D001482 ORTHO05D001499 8.3e-11 72.0 148 33.8
Gohir.A09G027200 Gossypium hirsutum HOM05D001482 ORTHO05D001499 1.1e-10 71.6 134 70.9
Gohir.A05G358100 Gossypium hirsutum HOM05D001482 ORTHO05D001499 1.9e-10 70.9 174 56.9
Potri.001G347000 Populus trichocarpa HOM05D001482 ORTHO05D001499 1.9e-10 70.9 174 40.2
Sed0004886 Sechium edule HOM05D001482 ORTHO05D001499 1.9e-10 70.9 137 35.8
CiPaw.03G040400 Carya illinoinensis HOM05D001482 ORTHO05D001499 2.4e-10 70.5 135 37.8
FAN09G3063 Fragaria x ananassa HOM05D001482 ORTHO05D001499 2.4e-10 70.5 154 31.8
Gohir.D04G056000 Gossypium hirsutum HOM05D001482 ORTHO05D001499 7.0e-10 68.9 137 65.7
Gorai.012G062900 Gossypium raimondii HOM05D001482 ORTHO05D001499 7.0e-10 68.9 137 67.2
Atru.chr6.2336 Acer truncatum HOM05D001482 ORTHO05D001499 9.2e-10 68.6 181 60.2
Gohir.D09G026850 Gossypium hirsutum HOM05D001482 ORTHO05D001499 1.2e-09 68.2 134 70.1
Gorai.006G031000 Gossypium raimondii HOM05D001482 ORTHO05D001499 1.2e-09 68.2 134 70.1
Duzib147G0648 Durio zibethinus HOM05D001482 ORTHO05D001499 1.6e-09 67.8 141 68.1
Prupe.3G287400 Prunus persica HOM05D001482 ORTHO05D001499 1.6e-09 67.8 147 32.7
TWI15G0287 Tripterygium wilfordii HOM05D001482 ORTHO05D001499 3.5e-09 66.6 137 63.5
FAN05G1187 Fragaria x ananassa HOM05D001482 ORTHO05D001499 6.0e-09 65.9 154 31.2
CANSAT64G2550 Cannabis sativa HOM05D001482 ORTHO05D001499 7.8e-09 65.5 145 35.9
FAN02G0888 Fragaria x ananassa HOM05D001482 ORTHO05D001499 1.3e-08 64.7 142 32.4
Thecc.04G012400 Theobroma cacao HOM05D001482 ORTHO05D001499 1.3e-08 64.7 141 66.0
Ca_04180_v3 Cicer arietinum L. HOM05D001482 ORTHO05D001499 1.7e-08 64.3 147 32.0
FAN05G0645 Fragaria x ananassa HOM05D001482 ORTHO05D017727 1.7e-08 64.3 134 33.6
ClCG10G014050 Citrullus lanatus HOM05D001482 ORTHO05D001499 2.3e-08 63.9 144 31.2
QL02p075785 Quercus lobata HOM05D001482 ORTHO05D001499 2.3e-08 63.9 141 33.3
Sabra16G0226700 Salix brachista HOM05D001482 ORTHO05D001499 2.3e-08 63.9 154 39.6
Sed0012292 Sechium edule HOM05D001482 ORTHO05D001499 2.3e-08 63.9 137 34.3
Glyma.19G006100 Glycine max HOM05D001482 ORTHO05D001499 3.0e-08 63.5 148 33.1
CsaV3_3G042610 Cucumis sativus L. HOM05D001482 ORTHO05D001499 3.9e-08 63.2 132 31.8
MELO3C009972.2 Cucumis melo HOM05D001482 ORTHO05D001499 8.6e-08 62.0 132 31.8
CSS0028746 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 1.1e-07 61.6 147 32.0
CSS0045059 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D001499 1.1e-07 61.6 147 32.0
Glyma.05G005600 Glycine max HOM05D001482 ORTHO05D001499 1.1e-07 61.6 158 31.6
Prupe.8G038800 Prunus persica HOM05D001482 ORTHO05D001499 1.1e-07 61.6 136 33.8
Rhsim08G0053000 Rhododendron simsii HOM05D001482 ORTHO05D001499 1.5e-07 61.2 128 34.4
CSS0022629 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D017727 1.9e-07 60.8 59 50.8
CSS0023287 Camellia sinensis var. sinensis HOM05D001482 ORTHO05D017727 1.9e-07 60.8 59 50.8
Phvul.004G011700 Phaseolus vulgaris HOM05D001482 ORTHO05D001499 5.6e-07 59.3 148 31.8
Lj3g0026972 Lotus japonicus HOM05D001482 ORTHO05D001499 7.3e-07 58.9 149 30.9
Hma1.2p1_0224F.1_g094660 Hydrangea macrophylla HOM05D001482 ORTHO05D001499 1.2e-06 58.2 141 33.3
Medtr5g019420 Medicago truncatula HOM05D001482 ORTHO05D001499 1.2e-06 58.2 151 28.5
MSTRG.15520 Avicennia marina HOM05D001482 ORTHO05D001499 2.1e-06 57.4 147 29.9
MD09G1029900 Malus domestica HOM05D001482 ORTHO05D001499 2.1e-06 57.4 48 54.2
PGR083G0117 Punica granatum HOM05D001482 ORTHO05D001499 3.6e-06 56.6 137 30.7
FAN05G4389 Fragaria x ananassa HOM05D001482 ORTHO05D001499 6.2e-06 55.8 143 30.1
Duzib264G0359 Durio zibethinus HOM05D001482 ORTHO05D001499 8.0e-06 55.5 40 65.0
FvH4_6g30300 Fragaria vesca HOM05D001482 ORTHO05D001499 8.0e-06 55.5 148 30.4
FAN14G2299 Fragaria x ananassa HOM05D001482 ORTHO05D001499 8.0e-06 55.5 143 30.1
MD17G1031900 Malus domestica HOM05D001482 ORTHO05D001499 8.0e-06 55.5 49 51.0
Oeu043039.2 Olea europaea HOM05D001482 ORTHO05D001499 8.0e-06 55.5 158 29.1
TAR374G1638 Trochodendron aralioides HOM05D001482 ORTHO05D001499 8.0e-06 55.5 142 29.6
VMungo0464G0844 Vigna mungo HOM05D001482 ORTHO05D001499 8.0e-06 55.5 148 32.4


User provided reference genes

Program Settings