Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25322 Sapria himalayana HOM05D000706 ORTHO05D012096 2.4e-139 498.8 250 100.0
Manes.10G110800 Manihot esculenta HOM05D000706 ORTHO05D001554 4.7e-26 122.5 318 32.1
Actinidia16541 Actinidia chinensis HOM05D000706 ORTHO05D001554 6.1e-18 95.5 269 29.7
CSS0020817 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D001554 8.0e-18 95.1 205 31.7
Gohir.D04G177400 Gossypium hirsutum HOM05D000706 ORTHO05D001554 1.2e-16 91.3 292 27.4
Gorai.012G170300 Gossypium raimondii HOM05D000706 ORTHO05D001554 1.5e-16 90.9 285 28.4
Duzib132G0489 Durio zibethinus HOM05D000706 ORTHO05D001554 3.4e-16 89.7 306 26.8
MD15G1440800 Malus domestica HOM05D000706 ORTHO05D012096 3.4e-16 89.7 343 27.4
QL02p102391 Quercus lobata HOM05D043302 ORTHO05D012096 6.3e-15 85.5 285 29.8
Prupe.4G286800 Prunus persica HOM05D000706 ORTHO05D001554 5.4e-14 82.4 281 27.0
ClCG10G007330 Citrullus lanatus HOM05D000706 ORTHO05D001554 7.0e-14 82.0 247 30.4
MD15G1140400 Malus domestica HOM05D000706 ORTHO05D001554 7.0e-14 82.0 292 27.1
Potri.004G133600 Populus trichocarpa HOM05D000706 ORTHO05D001554 9.1e-14 81.6 272 27.2
QL02p103028 Quercus lobata HOM05D043302 ORTHO05D012096 9.1e-14 81.6 280 29.6
Sp2g23700 Schrenkiella parvula HOM05D000706 ORTHO05D001554 9.1e-14 81.6 261 27.2
FAN26G0079 Fragaria x ananassa HOM05D000706 ORTHO05D001554 1.6e-13 80.9 282 26.6
Prupe.1G582800 Prunus persica HOM05D000706 ORTHO05D001554 2.0e-13 80.5 96 43.8
Duzib147G0053 Durio zibethinus HOM05D000706 ORTHO05D001554 2.7e-13 80.1 266 27.1
TWI59G0710 Tripterygium wilfordii HOM05D000706 ORTHO05D001554 2.7e-13 80.1 94 44.7
MELO3C012577.2 Cucumis melo HOM05D000706 ORTHO05D001554 3.5e-13 79.7 276 25.7
EL10Ac6g14021 Beta vulgaris HOM05D000706 ORTHO05D001554 5.9e-13 79.0 215 28.8
CARHR204580 Cardamine hirsuta HOM05D000706 ORTHO05D001554 5.9e-13 79.0 296 27.0
Cfa019817 Carpinus fangiana HOM05D000706 ORTHO05D001554 7.7e-13 78.6 226 27.4
RcHm_v2.0_Chr6g0272281 Rosa chinensis HOM05D000706 ORTHO05D012096 7.7e-13 78.6 260 28.1
CsaV3_7G023180 Cucumis sativus L. HOM05D000706 ORTHO05D001554 1.7e-12 77.4 270 25.9
MELO3C016482.2 Cucumis melo HOM05D000706 ORTHO05D001554 2.9e-12 76.6 93 41.9
Sed0026982 Sechium edule HOM05D000706 ORTHO05D012096 2.9e-12 76.6 231 32.0
Sopen01g033940 Solanum pennellii HOM05D000706 ORTHO05D001554 3.8e-12 76.3 298 26.2
Gorai.005G172400 Gossypium raimondii HOM05D000706 ORTHO05D001554 5.0e-12 75.9 274 24.8
Medtr3g064250 Medicago truncatula HOM05D000706 ORTHO05D001554 5.0e-12 75.9 316 26.3
Sed0004427 Sechium edule HOM05D000706 ORTHO05D001554 5.0e-12 75.9 311 23.5
Thecc.02G012800 Theobroma cacao HOM05D000706 ORTHO05D001554 5.0e-12 75.9 302 25.8
COL.COLO4_12141 Corchorus olitorius HOM05D000706 ORTHO05D001554 6.5e-12 75.5 267 27.3
Medtr3g064280 Medicago truncatula HOM05D000706 ORTHO05D001554 6.5e-12 75.5 313 27.8
Lj6g0005324 Lotus japonicus HOM05D000706 ORTHO05D001554 1.1e-11 74.7 102 36.3
Phvul.006G085500 Phaseolus vulgaris HOM05D000706 ORTHO05D012096 1.1e-11 74.7 95 37.9
Thecc.01G144400 Theobroma cacao HOM05D000706 ORTHO05D001554 1.1e-11 74.7 354 25.4
Dinv09371 Davidia involucrata HOM05D000706 ORTHO05D001554 2.5e-11 73.6 288 25.0
FAN28G2355 Fragaria x ananassa HOM05D000706 ORTHO05D001554 2.5e-11 73.6 274 26.3
FvH4_1g25810 Fragaria vesca HOM05D000706 ORTHO05D001554 3.2e-11 73.2 276 25.7
FAN19G2540 Fragaria x ananassa HOM05D000706 ORTHO05D001554 5.5e-11 72.4 275 25.8
AT5G08430 Arabidopsis thaliana HOM05D000706 ORTHO05D001554 7.2e-11 72.0 298 26.8
Gohir.D02G153300 Gossypium hirsutum HOM05D000706 ORTHO05D001554 7.2e-11 72.0 274 24.8
Sabra04G0084500 Salix brachista HOM05D000706 ORTHO05D001554 7.2e-11 72.0 224 28.6
Medtr3g064270 Medicago truncatula HOM05D000706 ORTHO05D001554 1.2e-10 71.2 330 26.4
EL10Ac4g09693 Beta vulgaris HOM05D000706 ORTHO05D001554 2.1e-10 70.5 305 25.6
BolC2t12136H Brassica oleracea HOM05D000706 ORTHO05D001554 2.1e-10 70.5 250 29.2
FAN23G1421 Fragaria x ananassa HOM05D000706 ORTHO05D001554 2.8e-10 70.1 275 25.8
Glyma.11G208500 Glycine max HOM05D000706 ORTHO05D001554 2.8e-10 70.1 98 34.7
FAN27G2281 Fragaria x ananassa HOM05D000706 ORTHO05D001554 4.7e-10 69.3 80 45.0
Lj5A276G88 Lonicera japonica HOM05D017178 ORTHO05D012096 4.7e-10 69.3 234 28.2
FvH4_2g12310 Fragaria vesca HOM05D000706 ORTHO05D001554 6.1e-10 68.9 80 45.0
Ca_09585_v3 Cicer arietinum L. HOM05D005973 ORTHO05D007285 8.0e-10 68.6 285 25.6
MSTRG.16476 Avicennia marina HOM05D000706 ORTHO05D001554 1.8e-09 67.4 290 25.5
VMungo0540G0276 Vigna mungo HOM05D000706 ORTHO05D012096 1.8e-09 67.4 144 29.2
Dinv29666 Davidia involucrata HOM05D000706 ORTHO05D001554 2.3e-09 67.0 363 23.4
Hma1.2p1_0157F.1_g069030 Hydrangea macrophylla HOM05D017178 ORTHO05D012096 2.3e-09 67.0 82 36.6
Hma1.2p1_1368F.1_g278556 Hydrangea macrophylla HOM05D017178 ORTHO05D012096 2.3e-09 67.0 82 36.6
Rhsim06G0200400 Rhododendron simsii HOM05D017178 ORTHO05D012096 2.3e-09 67.0 148 34.5
GSVIVG01023195001 Vitis vinifera HOM05D000706 ORTHO05D001554 2.3e-09 67.0 104 36.5
C02p03620 Brassica napus HOM05D000706 ORTHO05D001554 4.0e-09 66.2 315 24.1
COL.COLO4_17687 Corchorus olitorius HOM05D000706 ORTHO05D001554 4.0e-09 66.2 81 42.0
CiPaw.06G001000 Carya illinoinensis HOM05D000706 ORTHO05D001554 5.2e-09 65.9 217 28.1
Thhalv10013270m.g Eutrema salsugineum HOM05D000706 ORTHO05D001554 6.8e-09 65.5 292 25.0
Nitab4.5_0000753g0060 Nicotiana tabacum HOM05D000706 ORTHO05D001633 8.8e-09 65.1 255 25.5
Carub.0006s0735 Capsella rubella HOM05D000706 ORTHO05D001554 1.5e-08 64.3 301 24.6
GSVIVG01023170001 Vitis vinifera HOM05D000706 ORTHO05D012096 1.5e-08 64.3 51 45.1
Cc02_g27620 Coffea canephora HOM05D000706 ORTHO05D001554 2.6e-08 63.5 238 27.7
Sp6g34490 Schrenkiella parvula HOM05D000706 ORTHO05D001554 3.4e-08 63.2 272 24.3
GSVIVG01023197001 Vitis vinifera HOM05D000706 ORTHO05D012096 4.4e-08 62.8 199 26.6
BraA02t04959Z Brassica rapa HOM05D000706 ORTHO05D001554 5.7e-08 62.4 317 24.9
Nitab4.5_0003361g0020 Nicotiana tabacum HOM05D000706 ORTHO05D001554 5.7e-08 62.4 234 25.6
TAR376G1119 Trochodendron aralioides HOM05D000706 ORTHO05D001554 5.7e-08 62.4 353 22.1
CANSAT56G1438 Cannabis sativa HOM05D000706 ORTHO05D001554 7.5e-08 62.0 256 24.2
CARHR190040 Cardamine hirsuta HOM05D000706 ORTHO05D001554 7.5e-08 62.0 279 24.0
TAR628G1033 Trochodendron aralioides HOM05D000706 ORTHO05D012096 9.8e-08 61.6 109 33.0
AL6G18900 Arabidopsis lyrata HOM05D000706 ORTHO05D001554 1.3e-07 61.2 294 24.5
Sc16g0009760 Simmondsia chinensis HOM05D000706 ORTHO05D001554 2.2e-07 60.5 299 22.4
A02p40950 Brassica napus HOM05D000706 ORTHO05D001554 2.8e-07 60.1 222 25.2
HanXRQChr10g0285891 Helianthus annuus HOM05D000706 ORTHO05D001554 3.7e-07 59.7 219 26.5
Medtr3g064290 Medicago truncatula HOM05D000706 ORTHO05D001554 3.7e-07 59.7 294 25.9
arahy.Tifrunner.gnm1.ann1.3KND2G Arachis hypogaea HOM05D000706 ORTHO05D001554 4.9e-07 59.3 110 35.5
C02p60840 Brassica napus HOM05D000706 ORTHO05D001554 4.9e-07 59.3 211 26.1
Ca_25266_v3 Cicer arietinum L. HOM05D000706 ORTHO05D001554 4.9e-07 59.3 114 30.7
Lj3P1070T22 Lonicera japonica HOM05D017178 ORTHO05D012096 4.9e-07 59.3 171 31.0
Ca_17061_v3 Cicer arietinum L. HOM05D000706 ORTHO05D001554 6.3e-07 58.9 210 26.7
SGA_v2.0_scaffold167G38452 Striga asiatica HOM05D000706 ORTHO05D001554 6.3e-07 58.9 228 27.6
Eucgr.H05064 Eucalyptus grandis HOM05D000706 ORTHO05D001554 8.3e-07 58.5 293 22.9
Nitab4.5_0000634g0010 Nicotiana tabacum HOM05D000706 ORTHO05D001554 8.3e-07 58.5 234 23.9
C08p26390 Brassica napus HOM05D000706 ORTHO05D001633 1.1e-06 58.2 242 25.2
CAN.G170.123 Capsicum annuum HOM05D000706 ORTHO05D001554 1.1e-06 58.2 284 24.6
Oeu064260.1 Olea europaea HOM05D000706 ORTHO05D001554 1.1e-06 58.2 261 24.1
Atru.chr4.14_Atru.chr4.15 Acer truncatum HOM05D000706 ORTHO05D001554 1.4e-06 57.8 287 24.7
A09p44170 Brassica napus HOM05D000706 ORTHO05D001633 1.4e-06 57.8 245 25.3
Thhalv10003998m.g Eutrema salsugineum HOM05D000706 ORTHO05D001554 1.4e-06 57.8 264 25.4
Solyc01g086950.4 Solanum lycopersicum HOM05D000706 ORTHO05D001554 1.4e-06 57.8 86 38.4
Aa31LG3G18110 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.8e-06 57.4 295 23.7
AUR62000570 Chenopodium quinoa HOM05D000706 ORTHO05D001554 2.4e-06 57.0 77 39.0
ClCG09G022930 Citrullus lanatus HOM05D000706 ORTHO05D001554 2.4e-06 57.0 217 27.2
ECA233G0027 Erigeron canadensis HOM05D000706 ORTHO05D001554 2.4e-06 57.0 269 25.7
Lj3P665T11 Lonicera japonica HOM05D017178 ORTHO05D012096 2.4e-06 57.0 114 35.1
Lj2g0014541 Lotus japonicus HOM05D000706 ORTHO05D001554 2.4e-06 57.0 112 27.7
MD15G1249200 Malus domestica HOM05D000706 ORTHO05D001633 2.4e-06 57.0 256 23.8
Ah.03g136980 Amaranthus hybridus HOM05D000572 ORTHO05D000840 3.1e-06 56.6 83 38.6
Migut.B01326 Erythranthe guttata HOM05D000706 ORTHO05D001554 3.1e-06 56.6 80 36.2
Medtr3g064260 Medicago truncatula HOM05D000706 ORTHO05D001554 3.1e-06 56.6 305 23.3
Hund07199 Selenicereus undatus HOM05D000706 ORTHO05D001554 5.4e-06 55.8 93 34.4
CARHR160720 Cardamine hirsuta HOM05D000706 ORTHO05D001633 7.0e-06 55.5 195 24.6
Sp5g11090 Schrenkiella parvula HOM05D000706 ORTHO05D001633 7.0e-06 55.5 195 28.2
AL5G31540 Arabidopsis lyrata HOM05D000706 ORTHO05D001633 9.2e-06 55.1 192 27.1
Rhsim11G0183100 Rhododendron simsii HOM05D000706 ORTHO05D001633 9.2e-06 55.1 284 22.5
GSVIVG01000269001 Vitis vinifera HOM05D000706 ORTHO05D001554 9.2e-06 55.1 81 34.6


User provided reference genes

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