Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25075 Sapria himalayana HOM05D005166 ORTHO05D006120 4.7e-146 521.2 263 100.0
SHI33547 Sapria himalayana HOM05D005166 ORTHO05D006120 5.2e-60 235.3 197 68.5
SHI05908 Sapria himalayana HOM05D005166 ORTHO05D006120 7.0e-57 224.9 154 79.9
SHI31247 Sapria himalayana HOM05D005166 ORTHO05D006120 1.3e-55 220.7 214 62.1
SHI07724 Sapria himalayana HOM05D005166 ORTHO05D006120 3.0e-55 219.5 220 61.8
CiPaw.13G089200 Carya illinoinensis HOM05D005166 ORTHO05D006120 1.3e-34 151.0 131 61.8
Manes.01G169300 Manihot esculenta HOM05D005166 ORTHO05D006120 6.4e-34 148.7 127 63.0
Potri.001G244600 Populus trichocarpa HOM05D005166 ORTHO05D006120 1.4e-33 147.5 156 57.1
Potri.009G036900 Populus trichocarpa HOM05D005166 ORTHO05D006120 3.2e-33 146.4 129 62.8
CsaV3_1G034540 Cucumis sativus L. HOM05D005166 ORTHO05D006120 4.1e-33 146.0 153 56.2
Duzib168G0713 Durio zibethinus HOM05D005166 ORTHO05D006120 5.4e-33 145.6 155 53.5
Sabra09G0026100 Salix brachista HOM05D005166 ORTHO05D006120 7.1e-33 145.2 145 57.2
Sed0011931 Sechium edule HOM05D005166 ORTHO05D006120 2.1e-32 143.7 153 55.6
Gohir.D13G232000 Gossypium hirsutum HOM05D005166 ORTHO05D006120 2.7e-32 143.3 127 62.2
Gohir.A13G226600 Gossypium hirsutum HOM05D005166 ORTHO05D006120 4.6e-32 142.5 127 62.2
Nn2g11213 Nelumbo nucifera HOM05D005166 ORTHO05D006120 4.6e-32 142.5 127 60.6
GSVIVG01024906001 Vitis vinifera HOM05D005166 ORTHO05D006120 4.6e-32 142.5 127 59.1
Thecc.09G315500 Theobroma cacao HOM05D005166 ORTHO05D006120 6.0e-32 142.1 127 60.6
Ciclev10030390m.g Citrus clementina HOM05D005166 ORTHO05D006120 7.8e-32 141.7 127 62.2
Dinv34287 Davidia involucrata HOM05D005166 ORTHO05D006120 7.8e-32 141.7 127 61.4
COL.COLO4_18578 Corchorus olitorius HOM05D005166 ORTHO05D006120 1.7e-31 140.6 127 61.4
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum HOM05D005166 ORTHO05D006120 2.3e-31 140.2 130 58.5
Nn2g13459 Nelumbo nucifera HOM05D005166 ORTHO05D006120 3.9e-31 139.4 143 56.6
Dinv17047 Davidia involucrata HOM05D005166 ORTHO05D006120 5.1e-31 139.0 127 59.8
Dinv42991 Davidia involucrata HOM05D005166 ORTHO05D006120 5.1e-31 139.0 127 59.8
Dinv43106 Davidia involucrata HOM05D005166 ORTHO05D006120 5.1e-31 139.0 127 59.8
Gorai.013G262700 Gossypium raimondii HOM05D005166 ORTHO05D006120 6.6e-31 138.7 127 60.6
THA.LOC104800686 Tarenaya hassleriana HOM05D005166 ORTHO05D006120 1.1e-30 137.9 127 60.6
Rhsim13G0077000 Rhododendron simsii HOM05D005166 ORTHO05D006120 1.5e-30 137.5 128 58.6
Sabra16G0148400 Salix brachista HOM05D005166 ORTHO05D006120 3.3e-30 136.3 107 69.2
PGSC0003DMG400027986 Solanum tuberosum HOM05D005166 ORTHO05D006120 4.3e-30 136.0 127 57.5
Sed0000001 Sechium edule HOM05D005166 ORTHO05D006120 7.3e-30 135.2 165 52.1
Solyc09g030390.3 Solanum lycopersicum HOM05D005166 ORTHO05D006120 9.6e-30 134.8 142 52.1
Cc01_g13350 Coffea canephora HOM05D005166 ORTHO05D006120 1.2e-29 134.4 127 55.9
MD03G1086100 Malus domestica HOM05D005166 ORTHO05D006120 1.2e-29 134.4 153 52.3
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla HOM05D005166 ORTHO05D006120 1.6e-29 134.0 127 58.3
Sopen09g013470 Solanum pennellii HOM05D005166 ORTHO05D006120 1.6e-29 134.0 142 51.4
CSS0046995 Camellia sinensis var. sinensis HOM05D005166 ORTHO05D006120 2.1e-29 133.7 129 58.1
Eucgr.B02307 Eucalyptus grandis HOM05D005166 ORTHO05D006120 2.1e-29 133.7 127 57.5
vmacro03027 Vaccinium macrocarpon HOM05D005166 ORTHO05D006120 2.8e-29 133.3 127 57.5
ATR0559G187 Amborella trichopoda HOM05D005166 ORTHO05D006120 3.6e-29 132.9 127 55.9
CAN.G3.46 Capsicum annuum HOM05D005166 ORTHO05D006120 3.6e-29 132.9 128 56.2
MBI14_g11598_MAGBIO Magnolia biondii HOM05D005166 ORTHO05D006120 6.2e-29 132.1 176 48.9
QL01p029224 Quercus lobata HOM05D005166 ORTHO05D006120 6.2e-29 132.1 127 57.5
TPR.G23607 Trifolium pratense HOM05D005166 ORTHO05D006120 6.2e-29 132.1 127 57.5
PSO339G5769 Papaver somniferum HOM05D005166 ORTHO05D006120 8.1e-29 131.7 127 59.8
Zm00001eb012100 Zea mays HOM05D005166 ORTHO05D006120 8.1e-29 131.7 120 61.7
RcHm_v2.0_Chr5g0066361 Rosa chinensis HOM05D005166 ORTHO05D006120 1.1e-28 131.3 127 58.3
Hund04921 Selenicereus undatus HOM05D005166 ORTHO05D006120 1.1e-28 131.3 118 61.9
MD11G1094700 Malus domestica HOM05D005166 ORTHO05D006120 1.4e-28 131.0 127 59.1
Sc12g0001240 Simmondsia chinensis HOM05D005166 ORTHO05D006120 1.4e-28 131.0 127 57.5
Os03g0270200 Oryza sativa ssp. japonica HOM05D005166 ORTHO05D006120 1.8e-28 130.6 128 57.8
Aa31LG5G7110 Aethionema arabicum HOM05D005166 ORTHO05D006120 2.4e-28 130.2 150 54.7
Peaxi162Scf00676g00220 Petunia axillaris HOM05D005166 ORTHO05D006120 2.4e-28 130.2 127 55.9
Phvul.011G061700 Phaseolus vulgaris HOM05D005166 ORTHO05D006120 2.4e-28 130.2 127 57.5
Aqoxy2G02310 Aquilegia oxysepala HOM05D005166 ORTHO05D006120 3.1e-28 129.8 119 59.7
Migut.D00877 Erythranthe guttata HOM05D005166 ORTHO05D006120 3.1e-28 129.8 114 62.3
Medtr4g064740 Medicago truncatula HOM05D005166 ORTHO05D006120 3.1e-28 129.8 127 56.7
AL4G23770 Arabidopsis lyrata HOM05D005166 ORTHO05D006120 4.0e-28 129.4 139 56.1
Lj3g0025501 Lotus japonicus HOM05D005166 ORTHO05D006120 4.0e-28 129.4 127 55.9
HanXRQChr08g0237371 Helianthus annuus HOM05D005166 ORTHO05D006120 6.9e-28 128.6 125 57.6
HanXRQChr08g0237471 Helianthus annuus HOM05D005166 ORTHO05D006120 6.9e-28 128.6 125 57.6
Lalb_Chr01g0003471 Lupinus albus HOM05D005166 ORTHO05D006120 6.9e-28 128.6 153 50.3
Ah.08g220070 Amaranthus hybridus HOM05D005166 ORTHO05D006120 9.0e-28 128.3 148 53.4
ECA247G0723 Erigeron canadensis HOM05D005166 ORTHO05D006120 9.0e-28 128.3 150 52.0
Nitab4.5_0001999g0010 Nicotiana tabacum HOM05D005166 ORTHO05D006120 9.0e-28 128.3 144 51.4
Nitab4.5_0005248g0020 Nicotiana tabacum HOM05D005166 ORTHO05D006120 9.0e-28 128.3 144 50.7
arahy.Tifrunner.gnm1.ann1.L8ZXQA Arachis hypogaea HOM05D005166 ORTHO05D006120 1.5e-27 127.5 115 60.9
Thhalv10016250m.g Eutrema salsugineum HOM05D005166 ORTHO05D006120 1.5e-27 127.5 158 51.3
FAN21G1054 Fragaria x ananassa HOM05D005166 ORTHO05D006120 1.5e-27 127.5 145 52.4
FvH4_3g36942 Fragaria vesca HOM05D005166 ORTHO05D006120 2.0e-27 127.1 145 52.4
FAN11G2353 Fragaria x ananassa HOM05D005166 ORTHO05D006120 2.0e-27 127.1 145 52.4
Prupe.6G070300 Prunus persica HOM05D005166 ORTHO05D006120 2.0e-27 127.1 154 49.4
MSTRG.21221 Avicennia marina HOM05D005166 ORTHO05D006120 2.6e-27 126.7 113 60.2
FAN25G3327 Fragaria x ananassa HOM05D005166 ORTHO05D006120 2.6e-27 126.7 145 52.4
Haze_24170 Corylus avellana HOM05D005166 ORTHO05D006120 3.4e-27 126.3 104 64.4
Haze_24175 Corylus avellana HOM05D005166 ORTHO05D006120 3.4e-27 126.3 104 64.4
VMungo1127G2033 Vigna mungo HOM05D005166 ORTHO05D006120 3.4e-27 126.3 127 55.9
Psat7g210320 Pisum sativum HOM05D005166 ORTHO05D006120 4.4e-27 125.9 127 54.3
FAN16G3680 Fragaria x ananassa HOM05D005166 ORTHO05D006120 5.8e-27 125.6 145 53.1
Glyma.12G059700 Glycine max HOM05D005166 ORTHO05D006120 5.8e-27 125.6 127 55.1
TAR633G1610 Trochodendron aralioides HOM05D005166 ORTHO05D006120 5.8e-27 125.6 111 61.3
Lalb_Chr03g0026441 Lupinus albus HOM05D005166 ORTHO05D006120 7.6e-27 125.2 152 47.4
SEGI_12829 Sequoiadendron giganteum HOM05D005166 ORTHO05D006120 7.6e-27 125.2 113 59.3
Lsat_1_v5_gn_9_24820 Lactuca sativa HOM05D005166 ORTHO05D006120 1.3e-26 124.4 115 60.0
TAR636G0020 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.3e-26 124.4 110 60.9
TAR636G0138 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.3e-26 124.4 110 60.9
Ca_20616_v3 Cicer arietinum L. HOM05D005166 ORTHO05D006120 1.7e-26 124.0 127 53.5
AUR62001736 Chenopodium quinoa HOM05D005166 ORTHO05D006120 2.2e-26 123.6 111 64.9
CDE07G0344 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 3.8e-26 122.9 115 58.3
Lalb_Chr19g0137981 Lupinus albus HOM05D005166 ORTHO05D006120 3.8e-26 122.9 127 53.5
Glyma.11G136000 Glycine max HOM05D005166 ORTHO05D006120 4.9e-26 122.5 127 54.3
HanXRQChr01g0001871 Helianthus annuus HOM05D005166 ORTHO05D006120 6.4e-26 122.1 143 51.7
EL10Ac7g16070 Beta vulgaris HOM05D005166 ORTHO05D006120 8.4e-26 121.7 113 61.9
AT2G29210 Arabidopsis thaliana HOM05D005166 ORTHO05D006120 1.1e-25 121.3 135 54.8
SGA_v2.0_scaffold111G31544 Striga asiatica HOM05D005166 ORTHO05D006120 1.4e-25 120.9 111 59.5
AagrBONN_evm.TU.Sc2ySwM_117.3439 Anthoceros agrestis HOM05D005166 ORTHO05D006120 1.9e-25 120.6 172 44.8
arahy.Tifrunner.gnm1.ann1.SP769B Arachis hypogaea HOM05D005166 ORTHO05D006120 1.9e-25 120.6 128 55.5
DCAR_005942 Daucus carota HOM05D005166 ORTHO05D006120 1.9e-25 120.6 105 63.8
Cpa.g.sc81.97 Carica papaya HOM05D005166 ORTHO05D006120 3.2e-25 119.8 136 50.7
Sp4g12020 Schrenkiella parvula HOM05D005166 ORTHO05D006120 4.2e-25 119.4 132 53.8
unitig_746.g26715 Utricularia gibba HOM05D005166 ORTHO05D006120 5.4e-25 119.0 144 47.9
BcaB02g10233 Brassica carinata HOM05D005166 ORTHO05D006120 9.3e-25 118.2 158 47.5
Pp3c10_18390 Physcomitrium patens HOM05D005166 ORTHO05D006120 4.6e-24 115.9 136 49.3
Pp3c3_30240 Physcomitrium patens HOM05D005166 ORTHO05D006120 6.0e-24 115.5 138 48.6
Pp3c3_30241 Physcomitrium patens HOM05D005166 ORTHO05D006120 6.0e-24 115.5 138 48.6
SHI32778 Sapria himalayana HOM05D005166 ORTHO05D006120 7.8e-24 115.2 92 72.8
Carub.0004s1023 Capsella rubella HOM05D005166 ORTHO05D006120 1.0e-23 114.8 133 50.4
C04p21810 Brassica napus HOM05D005166 ORTHO05D006120 1.7e-23 114.0 152 47.4
BolC4t23701H Brassica oleracea HOM05D005166 ORTHO05D006120 1.7e-23 114.0 152 47.4
AUR62020041 Chenopodium quinoa HOM05D005166 ORTHO05D006120 1.7e-23 114.0 99 65.7
PGR102G2168 Punica granatum HOM05D005166 ORTHO05D006120 1.7e-23 114.0 123 52.0
BraA05t20522Z Brassica rapa HOM05D005166 ORTHO05D006120 3.9e-23 112.8 155 51.0
A05p16120 Brassica napus HOM05D005166 ORTHO05D006120 5.1e-23 112.5 154 47.4
HPP92_012608 Vanilla planifolia HOM05D005166 ORTHO05D006120 1.5e-22 110.9 110 59.1
Mapoly0063s0002 Marchantia polymorpha HOM05D005166 ORTHO05D006120 1.3e-21 107.8 93 59.1
CBR_g50691 Chara braunii HOM05D005166 ORTHO05D006120 3.6e-21 106.3 134 45.5
BcaB05g22029 Brassica carinata HOM05D005166 ORTHO05D006120 6.2e-21 105.5 121 52.9
Actinidia33768 Actinidia chinensis HOM05D005166 ORTHO05D006120 1.1e-17 94.7 83 62.7
SMO144G0189 Selaginella moellendorffii HOM05D005166 ORTHO05D006120 1.9e-17 94.0 97 52.6
SHI29822 Sapria himalayana HOM05D005166 ORTHO05D006120 7.9e-16 88.6 86 60.5
CDE06G0141 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 1.9e-14 84.0 77 57.1
Zm00001eb397830 Zea mays HOM05D005166 ORTHO05D006120 2.5e-14 83.6 88 58.0
Zm00001eb222410 Zea mays HOM05D005166 ORTHO05D006120 1.5e-11 74.3 61 63.9
Zm00001eb284680 Zea mays HOM05D005166 ORTHO05D006120 1.5e-11 74.3 80 58.8
MCO11G283 Micromonas commoda HOM05D005166 ORTHO05D006120 3.8e-10 69.7 122 36.1
Cre16.g678050 Chlamydomonas reinhardtii HOM05D005166 ORTHO05D006120 5.6e-06 55.8 139 31.7


User provided reference genes

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