Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25003 Sapria himalayana HOM05D004426 ORTHO05D002750 2.2e-102 375.6 183 100.0
SHI00996 Sapria himalayana HOM05D002920 ORTHO05D000014 4.3e-21 105.5 66 72.7
SHI16364 Sapria himalayana HOM05D000023 ORTHO05D002750 4.3e-21 105.5 66 68.2
SHI21431 Sapria himalayana HOM05D005437 ORTHO05D002750 5.6e-21 105.1 66 69.7
SHI14664 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-20 104.0 66 69.7
SHI47314 Sapria himalayana HOM05D000023 ORTHO05D000014 3.7e-20 102.4 66 69.7
SHI47801 Sapria himalayana HOM05D000023 ORTHO05D000014 3.7e-20 102.4 66 69.7
SHI01741 Sapria himalayana HOM05D000499 ORTHO05D002036 4.8e-20 102.1 66 69.7
SHI16920 Sapria himalayana HOM05D003924 ORTHO05D002750 4.8e-20 102.1 66 69.7
SHI14975 Sapria himalayana HOM05D000023 ORTHO05D000014 6.2e-20 101.7 66 69.7
SHI14959 Sapria himalayana HOM05D000023 ORTHO05D000014 8.2e-20 101.3 66 68.2
SHI28174 Sapria himalayana HOM05D000105 ORTHO05D000023 8.2e-20 101.3 66 69.7
SHI07150 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-19 100.5 66 69.7
SHI03370 Sapria himalayana HOM05D004002 ORTHO05D000023 1.8e-19 100.1 66 68.2
SHI32488 Sapria himalayana HOM05D000023 ORTHO05D002750 2.4e-19 99.8 66 66.7
SHI07784 Sapria himalayana HOM05D000023 ORTHO05D002750 6.9e-19 98.2 66 68.2
SHI10238 Sapria himalayana HOM05D000023 ORTHO05D000014 6.9e-19 98.2 66 68.2
SHI00079 Sapria himalayana HOM05D000023 ORTHO05D002750 1.2e-18 97.4 60 71.7
SHI08624 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-18 97.4 66 68.2
GSVIVG01021057001 Vitis vinifera HOM05D000628 ORTHO05D001866 1.2e-18 97.4 66 66.7
GSVIVG01032025001 Vitis vinifera HOM05D000073 ORTHO05D000033 2.0e-18 96.7 66 66.7
SHI03240 Sapria himalayana HOM05D000023 ORTHO05D000014 2.6e-18 96.3 66 65.2
SHI23518 Sapria himalayana HOM05D000023 ORTHO05D002750 4.2e-16 89.0 66 65.2
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 5.5e-16 88.6 50 74.0
SHI12781 Sapria himalayana HOM05D000023 ORTHO05D002750 1.2e-15 87.4 57 68.4
SHI21551 Sapria himalayana HOM05D000030 ORTHO05D002750 6.0e-15 85.1 53 71.7
SHI01247 Sapria himalayana HOM05D000023 ORTHO05D002750 7.9e-15 84.7 67 61.2
SHI15445 Sapria himalayana HOM05D004810 ORTHO05D006272 1.8e-14 83.6 66 56.1
SHI08345 Sapria himalayana HOM05D000023 ORTHO05D002750 8.7e-14 81.3 64 62.5
SHI04696 Sapria himalayana HOM05D000023 ORTHO05D002750 2.5e-13 79.7 54 64.8
SHI20191 Sapria himalayana HOM05D001459 ORTHO05D002750 3.3e-13 79.3 54 63.0
SHI16604 Sapria himalayana HOM05D000023 ORTHO05D002750 5.7e-13 78.6 57 61.4
SHI28844 Sapria himalayana HOM05D003717 ORTHO05D004848 4.8e-12 75.5 61 59.0
SHI17644 Sapria himalayana HOM05D000023 ORTHO05D002750 8.2e-12 74.7 57 57.9
SHI09417 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-11 74.3 50 64.0
SHI13516 Sapria himalayana HOM05D003135 ORTHO05D003715 1.1e-11 74.3 59 54.2
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 3.1e-11 72.8 96 46.9
SHI06139 Sapria himalayana HOM05D000515 ORTHO05D003188 3.1e-11 72.8 66 54.5
SHI09702 Sapria himalayana HOM05D000023 ORTHO05D002750 3.1e-11 72.8 61 57.4
SHI33356 Sapria himalayana HOM05D000023 ORTHO05D002750 4.1e-11 72.4 53 62.3
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 5.3e-11 72.0 96 45.8
SHI22233 Sapria himalayana HOM05D000023 ORTHO05D002750 5.3e-11 72.0 58 51.7
SHI37574 Sapria himalayana HOM05D000023 ORTHO05D002750 6.9e-11 71.6 53 58.5
SHI03332 Sapria himalayana HOM05D003492 ORTHO05D005115 1.2e-10 70.9 49 63.3
SHI22487 Sapria himalayana HOM05D000023 ORTHO05D002750 1.2e-10 70.9 64 53.1
SHI39049 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-10 70.9 58 58.6
SHI02424 Sapria himalayana HOM05D000023 ORTHO05D002750 1.5e-10 70.5 43 69.8
SHI40744 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-10 70.5 97 44.3
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 2.0e-10 70.1 97 42.3
SHI06954 Sapria himalayana HOM05D000023 ORTHO05D000014 2.0e-10 70.1 66 54.5
SHI28986 Sapria himalayana HOM05D000023 ORTHO05D002750 2.0e-10 70.1 49 67.3
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 2.0e-10 70.1 97 43.3
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 3.4e-10 69.3 97 44.3
SHI21613 Sapria himalayana HOM05D004277 ORTHO05D002750 3.4e-10 69.3 51 58.8
SHI12265 Sapria himalayana HOM05D000105 ORTHO05D000023 4.5e-10 68.9 54 61.1
SHI21585 Sapria himalayana HOM05D000023 ORTHO05D002750 7.7e-10 68.2 66 50.0
SHI20408 Sapria himalayana HOM05D004595 ORTHO05D002750 1.0e-09 67.8 52 61.5
SHI01315 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-09 67.4 48 56.2
SHI27567 Sapria himalayana HOM05D000842 ORTHO05D000650 1.3e-09 67.4 47 66.0
SHI01144 Sapria himalayana HOM05D000023 ORTHO05D002750 1.7e-09 67.0 66 53.0
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 2.2e-09 66.6 97 41.2
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 2.9e-09 66.2 99 42.4
SHI09001 Sapria himalayana HOM05D004490 ORTHO05D005353 3.8e-09 65.9 64 51.6
SHI12368 Sapria himalayana HOM05D000023 ORTHO05D000014 3.8e-09 65.9 45 62.2
Nitab4.5_0009099g0030 Nicotiana tabacum HOM05D000023 ORTHO05D002750 5.0e-09 65.5 67 43.3
Nitab4.5_0000644g0070 Nicotiana tabacum HOM05D000023 ORTHO05D002750 6.5e-09 65.1 67 41.8
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 8.5e-09 64.7 97 38.1
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 1.1e-08 64.3 97 39.2
SHI13211 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-08 64.3 66 50.0
SHI29852 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-08 64.3 39 71.8
SHI38710 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-08 63.9 114 39.5
Sopen08g011680 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-08 63.9 70 41.4
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 1.9e-08 63.5 96 38.5
SHI05643 Sapria himalayana HOM05D000023 ORTHO05D002750 1.9e-08 63.5 42 64.3
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.9e-08 63.5 94 41.5
SHI20461 Sapria himalayana HOM05D000023 ORTHO05D002750 2.5e-08 63.2 54 55.6
SHI24162 Sapria himalayana HOM05D050166 ORTHO05D002750 2.5e-08 63.2 62 48.4
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 3.2e-08 62.8 97 40.2
SHI26805 Sapria himalayana HOM05D002012 ORTHO05D002750 3.2e-08 62.8 82 46.3
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 4.2e-08 62.4 95 37.9
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 4.2e-08 62.4 94 40.4
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 4.2e-08 62.4 96 37.5
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 7.2e-08 61.6 97 40.2
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 7.2e-08 61.6 97 40.2
SHI13828 Sapria himalayana HOM05D000023 ORTHO05D000014 7.2e-08 61.6 42 64.3
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 1.2e-07 60.8 101 38.6
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 1.2e-07 60.8 95 37.9
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.2e-07 60.8 95 37.9
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.2e-07 60.8 95 37.9
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.2e-07 60.8 95 37.9
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.2e-07 60.8 95 37.9
SHI04515 Sapria himalayana HOM05D012376 ORTHO05D002750 1.2e-07 60.8 38 65.8
SHI11495 Sapria himalayana HOM05D002009 ORTHO05D005728 1.2e-07 60.8 84 41.7
SHI27485 Sapria himalayana HOM05D004447 ORTHO05D005973 1.2e-07 60.8 40 67.5
SHI28506 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-07 60.8 38 71.1
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.6e-07 60.5 95 37.9
SHI28488 Sapria himalayana HOM05D000023 ORTHO05D002750 1.6e-07 60.5 40 65.0
SHI00440 Sapria himalayana HOM05D000023 ORTHO05D000014 2.7e-07 59.7 38 65.8
SHI00822 Sapria himalayana HOM05D000023 ORTHO05D002750 2.7e-07 59.7 39 64.1
SHI08342 Sapria himalayana HOM05D000023 ORTHO05D002750 2.7e-07 59.7 42 57.1
SHI17420 Sapria himalayana HOM05D003637 ORTHO05D004175 2.7e-07 59.7 48 58.3
SHI21615 Sapria himalayana HOM05D000023 ORTHO05D002750 2.7e-07 59.7 41 63.4
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 3.6e-07 59.3 95 36.8
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 3.6e-07 59.3 97 38.1
SHI02292 Sapria himalayana HOM05D000023 ORTHO05D000002 4.6e-07 58.9 42 61.9
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 6.1e-07 58.5 96 36.5
SHI22921 Sapria himalayana HOM05D000428 ORTHO05D005608 7.9e-07 58.2 42 69.0
SHI32462 Sapria himalayana HOM05D000023 ORTHO05D002750 7.9e-07 58.2 39 66.7
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 1.4e-06 57.4 95 37.9
SHI11759 Sapria himalayana HOM05D000023 ORTHO05D002750 1.4e-06 57.4 38 65.8
SHI42077 Sapria himalayana HOM05D000023 ORTHO05D002750 1.4e-06 57.4 49 55.1
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 1.8e-06 57.0 93 36.6
SHI03501 Sapria himalayana HOM05D000023 ORTHO05D002750 1.8e-06 57.0 42 64.3
SHI02473 Sapria himalayana HOM05D000023 ORTHO05D002750 2.3e-06 56.6 42 54.8
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 3.0e-06 56.2 97 32.0
SHI15013 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-06 56.2 39 64.1
SHI21244 Sapria himalayana HOM05D000023 ORTHO05D002750 3.0e-06 56.2 42 57.1
Sopen01g015890 Solanum pennellii HOM05D000023 ORTHO05D002750 3.0e-06 56.2 67 35.8
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 3.9e-06 55.8 97 34.0
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 3.9e-06 55.8 96 36.5
SHI31181 Sapria himalayana HOM05D000023 ORTHO05D002750 5.1e-06 55.5 38 63.2
TWI53G0199 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 5.1e-06 55.5 66 39.4
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 6.7e-06 55.1 97 34.0
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 6.7e-06 55.1 97 33.0
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 6.7e-06 55.1 58 41.4
Nitab4.5_0004620g0060 Nicotiana tabacum HOM05D000023 ORTHO05D002750 6.7e-06 55.1 55 41.8
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 6.7e-06 55.1 96 38.5
SHI04444 Sapria himalayana HOM05D030255 ORTHO05D002750 6.7e-06 55.1 78 38.5
SHI18642 Sapria himalayana HOM05D000023 ORTHO05D002750 6.7e-06 55.1 55 49.1
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 8.8e-06 54.7 96 36.5
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 8.8e-06 54.7 96 38.5


User provided reference genes

Program Settings