Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24997 Sapria himalayana HOM05D000002 ORTHO05D000047 4.2e-77 291.2 137 100.0
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 2.0e-26 122.9 83 71.1
Oeu021652.1 Olea europaea HOM05D000002 ORTHO05D000047 2.4e-24 115.9 83 67.5
Cpa.g.sc164.10 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-24 115.5 92 63.0
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 1.0e-22 110.5 94 53.2
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 1.0e-22 110.5 89 55.1
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 1.3e-22 110.2 94 53.2
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 2.9e-22 109.0 89 53.9
Cpa.g.sc20.211 Carica papaya HOM05D000002 ORTHO05D000047 5.0e-22 108.2 91 57.1
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 8.5e-22 107.5 89 55.1
Cpa.g.sc487.6 Carica papaya HOM05D000002 ORTHO05D000047 4.4e-18 95.1 67 65.7
HPP92_021869 Vanilla planifolia HOM05D000002 ORTHO05D000047 9.7e-18 94.0 78 52.6
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 2.2e-17 92.8 66 60.6
Oeu008211.1 Olea europaea HOM05D000002 ORTHO05D000047 8.3e-17 90.9 78 52.6
Oeu034110.1 Olea europaea HOM05D000002 ORTHO05D000047 1.1e-16 90.5 66 60.6
Eucgr.C01993 Eucalyptus grandis HOM05D000002 ORTHO05D000047 2.4e-16 89.4 90 46.7
CSS0039864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-16 89.0 66 57.6
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 9.1e-16 87.4 65 56.9
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 2.0e-15 86.3 76 53.9
Cpa.g.c39297 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-15 85.9 87 52.9
Oeu025453.1 Olea europaea HOM05D000002 ORTHO05D000047 3.5e-15 85.5 89 42.7
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 4.5e-15 85.1 65 55.4
CSS0022475 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-14 83.2 52 65.4
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 2.2e-14 82.8 66 54.5
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.8e-14 82.0 76 51.3
VMungo0251G1086 Vigna mungo HOM05D000336 ORTHO05D002705 3.8e-14 82.0 65 56.9
Cpa.g.sc15.71 Carica papaya HOM05D000002 ORTHO05D000047 8.5e-14 80.9 67 55.2
SHI31183 Sapria himalayana HOM05D001336 ORTHO05D001211 2.7e-12 75.9 48 79.2
VMungo1383G3030 Vigna mungo HOM05D000002 ORTHO05D019586 3.6e-12 75.5 70 47.1
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 4.7e-12 75.1 90 45.6
Hma1.2p1_0324F.1_g125750 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.1e-12 74.7 72 50.0
Eucgr.H02766 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.0e-11 73.9 59 54.2
arahy.Tifrunner.gnm1.ann1.3QE0TW Arachis hypogaea HOM05D000002 ORTHO05D000047 1.4e-11 73.6 63 54.0
TPR.G30202 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-11 73.2 65 47.7
arahy.Tifrunner.gnm1.ann1.5WF10W Arachis hypogaea HOM05D000002 ORTHO05D000047 6.8e-11 71.2 69 47.8
Eucgr.E03230 Eucalyptus grandis HOM05D000002 ORTHO05D000047 6.8e-11 71.2 65 49.2
SHI16228 Sapria himalayana HOM05D041920 ORTHO05D000047 8.8e-11 70.9 49 67.3
SHI03919 Sapria himalayana HOM05D000002 ORTHO05D000047 7.5e-10 67.8 80 42.5
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 1.3e-09 67.0 51 62.7
Cpa.g.sc32.2 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-09 66.6 71 54.9
SHI25275 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 63.9 48 62.5
Atru.chr11.1318 Acer truncatum HOM05D004129 ORTHO05D005039 3.1e-08 62.4 39 59.0
GSVIVG01017988001 Vitis vinifera HOM05D000002 ORTHO05D000047 4.1e-08 62.0 58 43.1
Cpa.g.sc110.37 Carica papaya HOM05D000002 ORTHO05D000047 4.5e-07 58.5 39 53.8
Sopen12g014460 Solanum pennellii HOM05D000014 ORTHO05D000016 7.7e-07 57.8 40 55.0
HPP92_022694 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.0e-06 57.4 56 48.2
HPP92_005074 Vanilla planifolia HOM05D000002 ORTHO05D000047 3.8e-06 55.5 49 49.0
HPP92_005717 Vanilla planifolia HOM05D000002 ORTHO05D000047 3.8e-06 55.5 47 51.1
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.6e-06 54.3 52 44.2
HPP92_021418 Vanilla planifolia HOM05D000002 ORTHO05D000047 8.6e-06 54.3 49 49.0


User provided reference genes

Program Settings