Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24976 Sapria himalayana HOM05D000079 ORTHO05D006397 1.6e-48 195.7 93 100.0
SHI24903 Sapria himalayana HOM05D000079 ORTHO05D002610 1.3e-13 79.7 51 72.5
Dinv19186 Davidia involucrata HOM05D000079 ORTHO05D002610 3.3e-09 65.1 51 54.9
Manes.13G046100 Manihot esculenta HOM05D000079 ORTHO05D002610 9.6e-09 63.5 51 58.8
vmacro02773 Vaccinium macrocarpon HOM05D000079 ORTHO05D002610 2.1e-08 62.4 51 51.0
Rhsim13G0046800 Rhododendron simsii HOM05D000079 ORTHO05D002610 8.1e-08 60.5 51 51.0
Actinidia30062 Actinidia chinensis HOM05D000079 ORTHO05D002610 2.4e-07 58.9 51 51.0
arahy.Tifrunner.gnm1.ann1.47X2VM Arachis hypogaea HOM05D000079 ORTHO05D002610 2.4e-07 58.9 49 51.0
Phvul.008G130300 Phaseolus vulgaris HOM05D000079 ORTHO05D002610 3.1e-07 58.5 51 51.0
SHI07147 Sapria himalayana HOM05D001167 ORTHO05D001054 3.1e-07 58.5 36 69.4
VMungo1383G2754 Vigna mungo HOM05D000079 ORTHO05D002610 4.0e-07 58.2 56 48.2
PSO566G0212 Papaver somniferum HOM05D000079 ORTHO05D002610 5.3e-07 57.8 51 51.0
Medtr7g056087 Medicago truncatula HOM05D000079 ORTHO05D002610 6.9e-07 57.4 51 49.0
PSO782G0104 Papaver somniferum HOM05D000079 ORTHO05D002610 6.9e-07 57.4 51 51.0
Psat3g148560 Pisum sativum HOM05D000079 ORTHO05D002610 6.9e-07 57.4 51 47.1
Lalb_Chr19g0125771 Lupinus albus HOM05D000079 ORTHO05D002610 9.0e-07 57.0 51 51.0
Prupe.8G200500 Prunus persica HOM05D000079 ORTHO05D002610 1.2e-06 56.6 51 52.9
SHI26958 Sapria himalayana HOM05D007305 ORTHO05D003975 1.2e-06 56.6 40 62.5
arahy.Tifrunner.gnm1.ann1.7C0XXZ Arachis hypogaea HOM05D000079 ORTHO05D002610 1.5e-06 56.2 49 49.0
Lj1g0003447 Lotus japonicus HOM05D000079 ORTHO05D002610 1.5e-06 56.2 47 53.2
Potri.002G244600 Populus trichocarpa HOM05D000079 ORTHO05D002610 1.5e-06 56.2 51 45.1
arahy.Tifrunner.gnm1.ann1.FR9YD2 Arachis hypogaea HOM05D000079 ORTHO05D002610 2.0e-06 55.8 51 49.0
Glyma.18G166000 Glycine max HOM05D000079 ORTHO05D002610 2.0e-06 55.8 51 51.0
SHI07503 Sapria himalayana HOM05D000296 ORTHO05D000175 2.0e-06 55.8 31 74.2
TWI75G0083 Tripterygium wilfordii HOM05D000079 ORTHO05D002610 2.0e-06 55.8 51 51.0
GSVIVG01003277001 Vitis vinifera HOM05D000079 ORTHO05D002610 2.0e-06 55.8 51 51.0
SHI15628 Sapria himalayana HOM05D000104 ORTHO05D006397 2.6e-06 55.5 78 39.7
Nn1g07923 Nelumbo nucifera HOM05D000079 ORTHO05D002610 3.4e-06 55.1 51 49.0
SHI37131 Sapria himalayana HOM05D005043 ORTHO05D006182 3.4e-06 55.1 39 61.5
Ca_20017_v3 Cicer arietinum L. HOM05D000079 ORTHO05D002610 4.4e-06 54.7 51 47.1
Ca_24131_v3 Cicer arietinum L. HOM05D000079 ORTHO05D002610 5.8e-06 54.3 51 47.1
CSS0025507 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D002610 9.9e-06 53.5 52 48.1


User provided reference genes

Program Settings