Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24975 Sapria himalayana HOM05D000079 ORTHO05D002610 1.7e-44 182.2 86 100.0
SHI24903 Sapria himalayana HOM05D000079 ORTHO05D002610 8.5e-20 100.1 62 77.4
GSVIVG01003277001 Vitis vinifera HOM05D000079 ORTHO05D002610 1.8e-17 92.4 63 65.1
Manes.13G046100 Manihot esculenta HOM05D000079 ORTHO05D002610 6.8e-17 90.5 63 63.5
Prupe.8G200500 Prunus persica HOM05D000079 ORTHO05D002610 5.7e-16 87.4 63 65.1
Sabra02G0186100 Salix brachista HOM05D000079 ORTHO05D002610 7.5e-16 87.0 66 62.1
Rhsim13G0046800 Rhododendron simsii HOM05D000079 ORTHO05D002610 9.8e-16 86.7 63 61.9
Actinidia30062 Actinidia chinensis HOM05D000079 ORTHO05D002610 1.3e-15 86.3 84 51.2
CSS0025507 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D002610 1.7e-15 85.9 63 58.7
Dinv19186 Davidia involucrata HOM05D000079 ORTHO05D002610 1.7e-15 85.9 63 61.9
TWI75G0083 Tripterygium wilfordii HOM05D000079 ORTHO05D002610 3.7e-15 84.7 63 61.9
vmacro02773 Vaccinium macrocarpon HOM05D000079 ORTHO05D002610 4.8e-15 84.3 63 61.9
Potri.002G244600 Populus trichocarpa HOM05D000079 ORTHO05D002610 1.1e-14 83.2 63 58.7
Phvul.008G130300 Phaseolus vulgaris HOM05D000079 ORTHO05D002610 2.4e-14 82.0 63 61.9
QL09p052145 Quercus lobata HOM05D000079 ORTHO05D002610 4.1e-14 81.3 76 50.0
PSO782G0104 Papaver somniferum HOM05D000079 ORTHO05D002610 7.0e-14 80.5 70 50.0
VMungo1383G2754 Vigna mungo HOM05D000079 ORTHO05D002610 9.1e-14 80.1 63 60.3
arahy.Tifrunner.gnm1.ann1.FR9YD2 Arachis hypogaea HOM05D000079 ORTHO05D002610 1.2e-13 79.7 63 60.3
Nn1g07923 Nelumbo nucifera HOM05D000079 ORTHO05D002610 2.7e-13 78.6 62 58.1
Psat3g148560 Pisum sativum HOM05D000079 ORTHO05D002610 2.7e-13 78.6 63 58.7
Medtr7g056087 Medicago truncatula HOM05D000079 ORTHO05D002610 3.5e-13 78.2 63 60.3
SEGI_38603 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 3.5e-13 78.2 63 52.4
Glyma.18G166000 Glycine max HOM05D000079 ORTHO05D002610 4.5e-13 77.8 63 58.7
Ca_20017_v3 Cicer arietinum L. HOM05D000079 ORTHO05D002610 1.0e-12 76.6 63 57.1
Lalb_Chr19g0125771 Lupinus albus HOM05D000079 ORTHO05D002610 1.3e-12 76.3 63 57.1
SEGI_17536 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 1.7e-12 75.9 63 50.8
Ca_24131_v3 Cicer arietinum L. HOM05D000079 ORTHO05D002610 3.8e-12 74.7 63 55.6
arahy.Tifrunner.gnm1.ann1.47X2VM Arachis hypogaea HOM05D000079 ORTHO05D002610 1.9e-11 72.4 69 53.6
arahy.Tifrunner.gnm1.ann1.7C0XXZ Arachis hypogaea HOM05D000079 ORTHO05D002610 4.2e-11 71.2 69 52.2
SEGI_27077 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 4.2e-11 71.2 61 49.2
SEGI_27698 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 2.8e-10 68.6 60 48.3
SEGI_18613 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 4.7e-10 67.8 61 49.2
SEGI_30955 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 4.7e-10 67.8 61 49.2
SEGI_18636 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 6.1e-10 67.4 60 48.3
Lj1g0003447 Lotus japonicus HOM05D000079 ORTHO05D002610 1.8e-09 65.9 56 57.1
Aqoxy2G03030 Aquilegia oxysepala HOM05D000079 ORTHO05D002610 2.3e-09 65.5 56 50.0
Rhsim04G0220100 Rhododendron simsii HOM05D000079 ORTHO05D002610 2.3e-09 65.5 54 50.0
ATR0743G222 Amborella trichopoda HOM05D000079 ORTHO05D002610 5.2e-09 64.3 54 46.3
SEGI_17238 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 5.2e-09 64.3 68 39.7
SGA_v2.0_scaffold69G23036 Striga asiatica HOM05D000079 ORTHO05D002610 6.8e-09 63.9 79 36.7
Manes.03G193700 Manihot esculenta HOM05D000079 ORTHO05D002610 1.2e-08 63.2 59 49.2
Thecc.04G282800 Theobroma cacao HOM05D000079 ORTHO05D002610 1.2e-08 63.2 59 47.5
Dinv38298 Davidia involucrata HOM05D000079 ORTHO05D002610 2.0e-08 62.4 55 50.9
SEGI_26267 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 3.4e-08 61.6 65 46.2
Aqoxy2G04108 Aquilegia oxysepala HOM05D000079 ORTHO05D002610 5.7e-08 60.8 76 32.9
ClCG05G006020 Citrullus lanatus HOM05D000079 ORTHO05D002610 5.7e-08 60.8 59 44.1
PGR083G0209 Punica granatum HOM05D000079 ORTHO05D002610 5.7e-08 60.8 53 49.1
CiPaw.01G149900 Carya illinoinensis HOM05D000079 ORTHO05D002610 7.5e-08 60.5 58 44.8
vmacro08129 Vaccinium macrocarpon HOM05D000079 ORTHO05D002610 7.5e-08 60.5 59 47.5
Lj3C815T13 Lonicera japonica HOM05D000079 ORTHO05D002610 9.8e-08 60.1 54 46.3
PSO541G2343 Papaver somniferum HOM05D000079 ORTHO05D002610 9.8e-08 60.1 82 35.4
SEGI_13983 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 1.3e-07 59.7 63 41.3
MELO3C006654.2 Cucumis melo HOM05D000079 ORTHO05D002610 1.7e-07 59.3 59 42.4
Duzib151G0445 Durio zibethinus HOM05D000079 ORTHO05D002610 1.7e-07 59.3 59 44.1
Glyma.16G044300 Glycine max HOM05D000079 ORTHO05D002610 1.7e-07 59.3 62 46.8
Nn3g21397 Nelumbo nucifera HOM05D000079 ORTHO05D002610 1.7e-07 59.3 58 46.6
Potri.010G180000 Populus trichocarpa HOM05D000079 ORTHO05D002610 2.2e-07 58.9 55 45.5
SEGI_05760 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 2.2e-07 58.9 60 41.7
SEGI_24676 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 2.2e-07 58.9 60 40.0
SEGI_29473 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 2.2e-07 58.9 60 41.7
SEGI_30966 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 2.2e-07 58.9 60 40.0
TAR362G0215 Trochodendron aralioides HOM05D000079 ORTHO05D002610 2.2e-07 58.9 58 43.1
Glyma.19G107700 Glycine max HOM05D000079 ORTHO05D002610 2.8e-07 58.5 71 40.8
Sabra10G0138000 Salix brachista HOM05D000079 ORTHO05D002610 2.8e-07 58.5 54 46.3
Hund22183 Selenicereus undatus HOM05D000079 ORTHO05D002610 2.8e-07 58.5 58 43.1
Migut.N00098 Erythranthe guttata HOM05D000079 ORTHO05D002610 3.7e-07 58.2 54 48.1
Ciclev10010861m.g Citrus clementina HOM05D000079 ORTHO05D002610 4.9e-07 57.8 54 44.4
SEGI_13564 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 4.9e-07 57.8 60 38.3
ATR0743G096 Amborella trichopoda HOM05D000079 ORTHO05D002610 6.3e-07 57.4 55 45.5
CsaV3_3G014530 Cucumis sativus L. HOM05D000079 ORTHO05D002610 6.3e-07 57.4 59 40.7
Oeu034708.1 Olea europaea HOM05D000079 ORTHO05D002610 6.3e-07 57.4 54 46.3
THA.LOC104825536 Tarenaya hassleriana HOM05D000079 ORTHO05D002610 6.3e-07 57.4 76 36.8
Duzib106G1734 Durio zibethinus HOM05D000079 ORTHO05D002610 8.3e-07 57.0 55 41.8
Nn5g29340 Nelumbo nucifera HOM05D000079 ORTHO05D002610 8.3e-07 57.0 54 42.6
Sed0000641 Sechium edule HOM05D000079 ORTHO05D002610 8.3e-07 57.0 63 42.9
Aa31LG2G2470 Aethionema arabicum HOM05D000079 ORTHO05D002610 1.1e-06 56.6 76 36.8
Ah.01g004860 Amaranthus hybridus HOM05D000079 ORTHO05D002610 1.1e-06 56.6 58 41.4
CDE02G3058 Ceratophyllum demersum HOM05D000079 ORTHO05D002610 1.1e-06 56.6 80 33.8
SGA_v2.0_scaffold94G28408 Striga asiatica HOM05D000079 ORTHO05D002610 1.1e-06 56.6 59 39.0
Nn1g09672 Nelumbo nucifera HOM05D000079 ORTHO05D002610 1.4e-06 56.2 54 46.3
Atru.chr12.1648 Acer truncatum HOM05D000079 ORTHO05D002610 1.8e-06 55.8 54 44.4
Aqoxy7G00883 Aquilegia oxysepala HOM05D000079 ORTHO05D002610 1.8e-06 55.8 63 38.1
AUR62024039 Chenopodium quinoa HOM05D000079 ORTHO05D002610 1.8e-06 55.8 58 39.7
Cc00_g15670 Coffea canephora HOM05D000079 ORTHO05D002610 1.8e-06 55.8 54 44.4
Medtr7g084940 Medicago truncatula HOM05D000079 ORTHO05D002610 1.8e-06 55.8 54 44.4
Psat0s2994g0040 Pisum sativum HOM05D000079 ORTHO05D002610 1.8e-06 55.8 71 38.0
SEGI_11538 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 1.8e-06 55.8 63 41.3
SEGI_11611 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 1.8e-06 55.8 63 41.3
AUR62040425 Chenopodium quinoa HOM05D000079 ORTHO05D002610 2.4e-06 55.5 58 39.7
SEGI_28783 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 2.4e-06 55.5 60 36.7
CARHR057110 Cardamine hirsuta HOM05D000079 ORTHO05D002610 3.1e-06 55.1 54 42.6
AUR62000272 Chenopodium quinoa HOM05D000079 ORTHO05D002610 3.1e-06 55.1 55 45.5
Migut.J01873 Erythranthe guttata HOM05D000079 ORTHO05D002610 3.1e-06 55.1 57 40.4
Manes.12G001800 Manihot esculenta HOM05D000079 ORTHO05D002610 3.1e-06 55.1 55 43.6
Mapoly0002s0087 Marchantia polymorpha HOM05D000079 ORTHO05D002610 3.1e-06 55.1 63 38.1
Prupe.6G364800 Prunus persica HOM05D000079 ORTHO05D002610 3.1e-06 55.1 54 42.6
SGA_v2.0_scaffold39G15170 Striga asiatica HOM05D000079 ORTHO05D002610 3.1e-06 55.1 76 34.2
CSS0002559 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D002610 4.1e-06 54.7 55 41.8
PSO541G6427 Papaver somniferum HOM05D000079 ORTHO05D002610 4.1e-06 54.7 61 39.3
QL01p051268 Quercus lobata HOM05D000079 ORTHO05D002610 4.1e-06 54.7 55 43.6
SEGI_02994 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 4.1e-06 54.7 66 37.9
Thecc.05G111000 Theobroma cacao HOM05D000079 ORTHO05D002610 4.1e-06 54.7 54 40.7
AT1G65450 Arabidopsis thaliana HOM05D000079 ORTHO05D002610 5.4e-06 54.3 54 42.6
arahy.Tifrunner.gnm1.ann1.L8L2Y0 Arachis hypogaea HOM05D000079 ORTHO05D002610 5.4e-06 54.3 58 41.4
arahy.Tifrunner.gnm1.ann1.Q7SBED Arachis hypogaea HOM05D000079 ORTHO05D002610 5.4e-06 54.3 58 41.4
A02p13230 Brassica napus HOM05D000079 ORTHO05D002610 5.4e-06 54.3 54 42.6
BraA02t06379Z Brassica rapa HOM05D000079 ORTHO05D002610 5.4e-06 54.3 54 42.6
AUR62006620 Chenopodium quinoa HOM05D000079 ORTHO05D002610 5.4e-06 54.3 55 43.6
Migut.K00016 Erythranthe guttata HOM05D000079 ORTHO05D002610 5.4e-06 54.3 63 34.9
Thhalv10018535m.g Eutrema salsugineum HOM05D000079 ORTHO05D002610 5.4e-06 54.3 54 42.6
Lj8A14T31 Lonicera japonica HOM05D000079 ORTHO05D002610 5.4e-06 54.3 55 43.6
Hund07375 Selenicereus undatus HOM05D000079 ORTHO05D002610 5.4e-06 54.3 71 36.6
TPR.G32195 Trifolium pratense HOM05D000079 ORTHO05D002610 5.4e-06 54.3 54 44.4
MSTRG.9241 Avicennia marina HOM05D000079 ORTHO05D002610 7.0e-06 53.9 54 46.3
BcaB05g24117 Brassica carinata HOM05D000079 ORTHO05D002610 7.0e-06 53.9 54 42.6
CsaV3_2G010300 Cucumis sativus L. HOM05D000079 ORTHO05D002610 7.0e-06 53.9 54 44.4
Lalb_Chr24g0403061 Lupinus albus HOM05D000079 ORTHO05D002610 7.0e-06 53.9 71 35.2
Nn1g09832 Nelumbo nucifera HOM05D000079 ORTHO05D002610 7.0e-06 53.9 54 42.6
AL2G22140 Arabidopsis lyrata HOM05D000079 ORTHO05D002610 9.2e-06 53.5 54 42.6
C06p39060 Brassica napus HOM05D000079 ORTHO05D002610 9.2e-06 53.5 54 42.6
BolC6t38998H Brassica oleracea HOM05D000079 ORTHO05D002610 9.2e-06 53.5 54 42.6
Migut.F02092 Erythranthe guttata HOM05D000079 ORTHO05D002610 9.2e-06 53.5 54 38.9
FvH4_6g00100 Fragaria vesca HOM05D000079 ORTHO05D002610 9.2e-06 53.5 54 38.9
FAN09G0046 Fragaria x ananassa HOM05D000079 ORTHO05D002610 9.2e-06 53.5 54 38.9
Manes.13G000900 Manihot esculenta HOM05D000079 ORTHO05D002610 9.2e-06 53.5 55 41.8
Oeu001118.1 Olea europaea HOM05D000079 ORTHO05D002610 9.2e-06 53.5 59 44.1
unitig_37.g12273 Utricularia gibba HOM05D000079 ORTHO05D002610 9.2e-06 53.5 54 42.6


User provided reference genes

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