Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24936 Sapria himalayana HOM05D001918 ORTHO05D001931 2.6e-62 241.9 122 100.0
Potri.001G272300 Populus trichocarpa HOM05D001918 ORTHO05D001931 1.6e-08 63.2 46 71.7
Sabra16G0167600 Salix brachista HOM05D001918 ORTHO05D001931 1.6e-08 63.2 46 71.7
Potri.009G066800 Populus trichocarpa HOM05D001918 ORTHO05D001931 2.1e-08 62.8 46 71.7
GSVIVG01037402001 Vitis vinifera HOM05D001918 ORTHO05D001931 2.1e-08 62.8 46 76.1
QL01p016274 Quercus lobata HOM05D001918 ORTHO05D001931 3.7e-08 62.0 46 71.7
Sabra09G0049700 Salix brachista HOM05D001918 ORTHO05D001931 3.7e-08 62.0 46 69.6
Lj1A290G41 Lonicera japonica HOM05D001918 ORTHO05D001931 4.8e-08 61.6 46 71.7
Lj1C297G10 Lonicera japonica HOM05D001918 ORTHO05D001931 4.8e-08 61.6 46 71.7
COL.COLO4_06630 Corchorus olitorius HOM05D001918 ORTHO05D001931 6.2e-08 61.2 46 71.7
Ciclev10015010m.g Citrus clementina HOM05D001918 ORTHO05D001931 8.1e-08 60.8 46 71.7
Nitab4.5_0000492g0160 Nicotiana tabacum HOM05D001918 ORTHO05D001931 8.1e-08 60.8 46 65.2
Nitab4.5_0002026g0110 Nicotiana tabacum HOM05D001918 ORTHO05D001931 8.1e-08 60.8 46 65.2
SGA_v2.0_scaffold26G11391 Striga asiatica HOM05D001918 ORTHO05D001931 1.1e-07 60.5 46 69.6
CSS0008053 Camellia sinensis var. sinensis HOM05D001918 ORTHO05D001931 1.4e-07 60.1 50 66.0
Cc01_g06670 Coffea canephora HOM05D001918 ORTHO05D001931 1.4e-07 60.1 46 69.6
Ca_28077_v3 Cicer arietinum L. HOM05D001918 ORTHO05D001931 1.8e-07 59.7 47 63.8
Duzib168G0969 Durio zibethinus HOM05D001918 ORTHO05D001931 1.8e-07 59.7 46 69.6
HanXRQChr15g0469121 Helianthus annuus HOM05D001918 ORTHO05D001931 1.8e-07 59.7 46 69.6
Medtr3g045180 Medicago truncatula HOM05D001918 ORTHO05D001931 1.8e-07 59.7 46 65.2
CSS0013797 Camellia sinensis var. sinensis HOM05D001918 ORTHO05D001931 2.4e-07 59.3 46 69.6
CSS0039146 Camellia sinensis var. sinensis HOM05D001918 ORTHO05D001931 2.4e-07 59.3 46 69.6
Duzib170G0436 Durio zibethinus HOM05D001918 ORTHO05D001931 3.1e-07 58.9 46 69.6
Solyc11g062390.3 Solanum lycopersicum HOM05D001918 ORTHO05D001931 3.1e-07 58.9 46 65.2
Sopen11g024380 Solanum pennellii HOM05D001918 ORTHO05D001931 3.1e-07 58.9 46 65.2
Duzib150G0802 Durio zibethinus HOM05D001918 ORTHO05D001931 4.0e-07 58.5 48 64.6
Gohir.A05G072700 Gossypium hirsutum HOM05D001918 ORTHO05D001931 4.0e-07 58.5 46 67.4
Gohir.D05G075600 Gossypium hirsutum HOM05D001918 ORTHO05D001931 4.0e-07 58.5 46 67.4
Gorai.009G077000 Gossypium raimondii HOM05D001918 ORTHO05D001931 4.0e-07 58.5 46 67.4
SGA_v2.0_scaffold3G01434 Striga asiatica HOM05D001918 ORTHO05D001931 4.0e-07 58.5 48 64.6
Actinidia24473 Actinidia chinensis HOM05D001918 ORTHO05D001931 5.3e-07 58.2 46 65.2
Eucgr.B03757 Eucalyptus grandis HOM05D001918 ORTHO05D001931 5.3e-07 58.2 46 63.0
Actinidia06984 Actinidia chinensis HOM05D001918 ORTHO05D001931 6.9e-07 57.8 46 65.2
DCAR_031620 Daucus carota HOM05D001918 ORTHO05D001931 6.9e-07 57.8 46 67.4
HanXRQChr06g0181581 Helianthus annuus HOM05D001918 ORTHO05D001931 6.9e-07 57.8 46 67.4
Lalb_Chr15g0080161 Lupinus albus HOM05D001918 ORTHO05D001931 6.9e-07 57.8 46 65.2
Gohir.A09G108800 Gossypium hirsutum HOM05D001918 ORTHO05D001931 1.2e-06 57.0 46 67.4
Hma1.2p1_0811F.1_g222110 Hydrangea macrophylla HOM05D001918 ORTHO05D001931 1.2e-06 57.0 46 65.2
Lsat_1_v5_gn_2_32180 Lactuca sativa HOM05D001918 ORTHO05D001931 1.2e-06 57.0 46 67.4
Thecc.09G253200 Theobroma cacao HOM05D001918 ORTHO05D001931 1.2e-06 57.0 46 67.4
Migut.D00684 Erythranthe guttata HOM05D001918 ORTHO05D001931 1.5e-06 56.6 46 65.2
Gohir.A13G220100 Gossypium hirsutum HOM05D001918 ORTHO05D001931 1.5e-06 56.6 46 63.0
Gohir.D13G224100 Gossypium hirsutum HOM05D001918 ORTHO05D001931 1.5e-06 56.6 46 63.0
Gorai.013G254900 Gossypium raimondii HOM05D001918 ORTHO05D001931 1.5e-06 56.6 46 63.0
Rhsim13G0204100 Rhododendron simsii HOM05D001918 ORTHO05D001931 1.5e-06 56.6 46 65.2
Atru.chr3.2841 Acer truncatum HOM05D001918 ORTHO05D001931 2.0e-06 56.2 46 65.2
Eucgr.J00669 Eucalyptus grandis HOM05D001918 ORTHO05D001931 2.0e-06 56.2 46 63.0
LjContig00564g0012359 Lotus japonicus HOM05D001918 ORTHO05D001931 2.0e-06 56.2 46 63.0
Manes.02G136000 Manihot esculenta HOM05D001918 ORTHO05D001931 2.0e-06 56.2 46 63.0
Peaxi162Scf00029g02412 Petunia axillaris HOM05D001918 ORTHO05D001931 2.0e-06 56.2 46 60.9
Prupe.4G270000 Prunus persica HOM05D001918 ORTHO05D001931 2.0e-06 56.2 46 67.4
arahy.Tifrunner.gnm1.ann1.19PDHV Arachis hypogaea HOM05D001918 ORTHO05D001931 2.6e-06 55.8 46 65.2
CAN.G96.7 Capsicum annuum HOM05D001918 ORTHO05D001931 2.6e-06 55.8 46 60.9
Migut.N02386 Erythranthe guttata HOM05D001918 ORTHO05D001931 2.6e-06 55.8 48 54.2
Glyma.02G277400 Glycine max HOM05D001918 ORTHO05D001931 2.6e-06 55.8 46 65.2
Glyma.14G037200 Glycine max HOM05D001918 ORTHO05D001931 2.6e-06 55.8 46 65.2
Sed0002720 Sechium edule HOM05D001918 ORTHO05D001931 2.6e-06 55.8 46 65.2
Cpa.g.sc34.193 Carica papaya HOM05D001918 ORTHO05D001931 3.4e-06 55.5 45 66.7
CiPaw.14G110100 Carya illinoinensis HOM05D001918 ORTHO05D001931 3.4e-06 55.5 46 65.2
CANSAT54G1086 Cannabis sativa HOM05D001918 ORTHO05D001931 4.5e-06 55.1 46 63.0
FAN16G2120 Fragaria x ananassa HOM05D001918 ORTHO05D001931 4.5e-06 55.1 46 65.2
MD03G1156800 Malus domestica HOM05D001918 ORTHO05D001931 4.5e-06 55.1 46 67.4
Oeu025920.2 Olea europaea HOM05D001918 ORTHO05D001931 4.5e-06 55.1 46 65.2
vmacro04076 Vaccinium macrocarpon HOM05D001918 ORTHO05D001931 4.5e-06 55.1 46 63.0
Haze_23277 Corylus avellana HOM05D001918 ORTHO05D001931 5.8e-06 54.7 46 65.2
Dinv29319 Davidia involucrata HOM05D001918 ORTHO05D001931 5.8e-06 54.7 46 65.2
Psat2g021360 Pisum sativum HOM05D001918 ORTHO05D001931 5.8e-06 54.7 46 60.9
TWI31G0888 Tripterygium wilfordii HOM05D001918 ORTHO05D001931 5.8e-06 54.7 44 70.5
TWI75G1710 Tripterygium wilfordii HOM05D001918 ORTHO05D001931 5.8e-06 54.7 44 68.2
SalBow6G2481 Salvia bowleyana HOM05D001918 ORTHO05D001931 7.6e-06 54.3 46 58.7
AL4G19960 Arabidopsis lyrata HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
AT2G26770 Arabidopsis thaliana HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
EL10Ac4g10080 Beta vulgaris HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 63.0
BcaC02g10839 Brassica carinata HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
A07p17860 Brassica napus HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
C04p24600 Brassica napus HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
BolC4t23965H Brassica oleracea HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
BraA07t29505Z Brassica rapa HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
Carub.0004s0718 Capsella rubella HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
CARHR118930 Cardamine hirsuta HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
CiPaw.13G147700 Carya illinoinensis HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 63.0
Thhalv10022499m.g Eutrema salsugineum HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
Manes.05G200300 Manihot esculenta HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9
Hund21958 Selenicereus undatus HOM05D001918 ORTHO05D001931 1.0e-05 53.9 46 60.9


User provided reference genes

Program Settings