Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 2.4e-104 382.1 182 100.0
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 7.3e-37 157.9 182 49.5
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 7.3e-37 157.9 182 48.9
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 1.6e-36 156.8 182 48.9
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 1.1e-35 154.1 180 50.0
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 1.4e-35 153.7 182 48.4
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 1.4e-35 153.7 182 48.9
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 2.3e-35 152.9 182 48.4
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 3.1e-35 152.5 182 47.8
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 3.1e-35 152.5 182 47.8
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 4.0e-35 152.1 182 46.7
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 4.0e-35 152.1 178 46.6
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 5.2e-35 151.8 180 48.9
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 6.8e-35 151.4 182 47.8
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 8.9e-35 151.0 182 47.8
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 1.5e-34 150.2 182 49.5
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 1.5e-34 150.2 178 49.4
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 2.0e-34 149.8 178 46.6
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 2.0e-34 149.8 178 46.1
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 2.0e-34 149.8 179 48.0
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 2.0e-34 149.8 178 48.9
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 2.0e-34 149.8 182 47.3
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 2.0e-34 149.8 178 49.4
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 2.0e-34 149.8 182 46.7
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 2.6e-34 149.4 179 48.0
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 3.4e-34 149.1 179 46.4
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 3.4e-34 149.1 178 46.1
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 3.4e-34 149.1 177 48.0
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 4.4e-34 148.7 173 50.3
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 4.4e-34 148.7 182 46.2
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 4.4e-34 148.7 182 45.6
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 4.4e-34 148.7 183 46.4
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 5.8e-34 148.3 178 47.8
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 5.8e-34 148.3 183 45.9
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 5.8e-34 148.3 178 45.5
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 7.6e-34 147.9 182 47.3
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 7.6e-34 147.9 178 46.6
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 7.6e-34 147.9 178 46.6
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 7.6e-34 147.9 182 47.3
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 9.9e-34 147.5 182 46.2
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 9.9e-34 147.5 178 48.3
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 9.9e-34 147.5 179 48.0
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 1.3e-33 147.1 178 46.1
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 1.3e-33 147.1 182 45.6
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 1.3e-33 147.1 182 45.6
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 1.3e-33 147.1 179 46.9
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 1.3e-33 147.1 182 46.2
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 1.3e-33 147.1 182 47.3
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 1.7e-33 146.7 182 45.6
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 1.7e-33 146.7 178 46.1
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 1.7e-33 146.7 178 47.2
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.7e-33 146.7 182 46.2
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 1.7e-33 146.7 178 47.8
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 1.7e-33 146.7 178 44.4
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 1.7e-33 146.7 182 47.3
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 2.2e-33 146.4 178 44.9
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 2.9e-33 146.0 179 48.0
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 4.9e-33 145.2 182 46.2
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 4.9e-33 145.2 182 46.2
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 6.4e-33 144.8 178 44.9
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 8.4e-33 144.4 182 46.7
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 8.4e-33 144.4 178 43.8
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 8.4e-33 144.4 178 43.8
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 8.4e-33 144.4 178 43.8
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 8.4e-33 144.4 178 46.1
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 8.4e-33 144.4 178 45.5
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 8.4e-33 144.4 178 48.3
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 1.1e-32 144.1 182 45.6
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 1.4e-32 143.7 178 47.2
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.9e-32 143.3 178 46.6
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.9e-32 143.3 182 45.1
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 1.9e-32 143.3 182 45.1
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 1.9e-32 143.3 182 45.6
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 2.4e-32 142.9 178 44.9
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.4e-32 142.9 178 46.1
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.4e-32 142.9 178 46.1
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.4e-32 142.9 178 46.1
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 3.2e-32 142.5 178 45.5
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 4.1e-32 142.1 181 45.3
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 5.4e-32 141.7 179 46.9
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 5.4e-32 141.7 181 44.8
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 5.4e-32 141.7 178 45.5
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 7.1e-32 141.4 179 43.6
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 1.2e-31 140.6 167 49.7
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 1.6e-31 140.2 178 43.3
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 1.6e-31 140.2 178 43.3
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 2.1e-31 139.8 178 44.4
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 2.7e-31 139.4 182 44.5
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 2.7e-31 139.4 178 44.4
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 3.5e-31 139.0 182 45.6
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 4.6e-31 138.7 178 45.5
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 4.6e-31 138.7 178 44.4
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 4.6e-31 138.7 181 43.6
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 6.0e-31 138.3 178 45.5
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 6.0e-31 138.3 182 44.0
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 6.0e-31 138.3 182 44.0
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 6.0e-31 138.3 182 44.5
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 6.0e-31 138.3 182 44.0
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 7.8e-31 137.9 182 44.0
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 7.8e-31 137.9 178 44.4
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 1.0e-30 137.5 182 43.4
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 1.0e-30 137.5 181 45.3
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 1.3e-30 137.1 182 42.9
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 6.6e-30 134.8 178 41.6
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 1.1e-29 134.0 179 43.6
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 1.1e-29 134.0 178 43.8
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 1.5e-29 133.7 173 43.9
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 5.6e-29 131.7 177 39.0
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 1.2e-28 130.6 175 42.9
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 1.6e-28 130.2 183 42.1
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 2.1e-28 129.8 182 44.5
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 1.1e-27 127.5 182 42.9
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 2.4e-27 126.3 178 43.3
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 6.9e-27 124.8 173 43.9
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 2.0e-26 123.2 169 42.0
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 1.1e-24 117.5 76 71.1
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 5.4e-24 115.2 182 39.0
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 1.2e-23 114.0 171 38.6
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 3.5e-23 112.5 173 41.6
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 4.6e-23 112.1 182 37.9
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.3e-22 110.5 182 37.9
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 2.5e-21 106.3 170 37.1
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 4.3e-21 105.5 76 63.2
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 4.3e-21 105.5 172 36.6
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 1.6e-20 103.6 172 36.6
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 3.2e-16 89.4 170 32.9
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.0e-14 84.3 139 41.7
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 1.4e-11 73.9 171 26.9
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.1e-08 64.3 37 78.4
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 1.9e-08 63.5 38 73.7
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 9.3e-08 61.2 38 68.4
Lalb_Chr09g0320811 Lupinus albus HOM05D001916 ORTHO05D003272 1.8e-06 57.0 169 24.3


User provided reference genes

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