Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24857 Sapria himalayana HOM05D001752 ORTHO05D003933 4.6e-59 231.1 123 100.0
Atru.chr5.1010 Acer truncatum HOM05D001752 ORTHO05D003933 7.9e-35 150.6 98 82.7
TWI09G0900 Tripterygium wilfordii HOM05D001752 ORTHO05D003933 5.1e-34 147.9 98 83.7
ClCG01G024860 Citrullus lanatus HOM05D001752 ORTHO05D003933 8.7e-34 147.1 98 80.6
MELO3C007109.2 Cucumis melo HOM05D001752 ORTHO05D003933 1.5e-33 146.4 98 80.6
Ciclev10015336m.g Citrus clementina HOM05D001752 ORTHO05D003933 1.9e-33 146.0 98 80.6
Atru.chr10.1117 Acer truncatum HOM05D001752 ORTHO05D003933 2.5e-33 145.6 98 80.6
CsaV3_6G051980 Cucumis sativus L. HOM05D001752 ORTHO05D003933 2.5e-33 145.6 98 79.6
SalBow8G0683 Salvia bowleyana HOM05D001752 ORTHO05D003933 2.5e-33 145.6 98 76.5
Manes.03G083900 Manihot esculenta HOM05D001752 ORTHO05D003933 7.4e-33 144.1 98 77.6
Solyc08g023470.3 Solanum lycopersicum HOM05D001752 ORTHO05D003933 1.3e-32 143.3 97 78.4
Sopen08g008630 Solanum pennellii HOM05D001752 ORTHO05D003933 1.3e-32 143.3 97 78.4
TAR624G0447 Trochodendron aralioides HOM05D001752 ORTHO05D003933 1.3e-32 143.3 98 78.6
GSVIVG01019299001 Vitis vinifera HOM05D001752 ORTHO05D003933 1.3e-32 143.3 97 81.4
Aqoxy5G01321 Aquilegia oxysepala HOM05D001752 ORTHO05D003933 1.6e-32 142.9 98 77.6
MSTRG.7509 Avicennia marina HOM05D001752 ORTHO05D003933 1.6e-32 142.9 98 76.5
CANSAT35G1643 Cannabis sativa HOM05D001752 ORTHO05D003933 2.1e-32 142.5 98 80.6
Sabra10G0107100 Salix brachista HOM05D001752 ORTHO05D003933 2.8e-32 142.1 98 79.6
CAN.G1226.43 Capsicum annuum HOM05D001752 ORTHO05D003933 3.7e-32 141.7 97 77.3
Nn3g20339 Nelumbo nucifera HOM05D001752 ORTHO05D003933 3.7e-32 141.7 98 77.6
Nn3g20342 Nelumbo nucifera HOM05D001752 ORTHO05D003933 3.7e-32 141.7 98 77.6
Lsat_1_v5_gn_7_49040 Lactuca sativa HOM05D001752 ORTHO05D003933 4.8e-32 141.4 98 77.6
Duzib235G0792 Durio zibethinus HOM05D001752 ORTHO05D003933 6.2e-32 141.0 98 79.6
SGA_v2.0_scaffold223G42822 Striga asiatica HOM05D001752 ORTHO05D003933 8.2e-32 140.6 98 75.5
Cpa.g.sc17.47 Carica papaya HOM05D001752 ORTHO05D003933 1.1e-31 140.2 98 79.6
PGR004G1548 Punica granatum HOM05D001752 ORTHO05D003933 1.1e-31 140.2 99 77.8
Sed0012054 Sechium edule HOM05D001752 ORTHO05D003933 1.1e-31 140.2 98 76.5
Eucgr.E02451 Eucalyptus grandis HOM05D001752 ORTHO05D003933 1.4e-31 139.8 98 78.6
MSTRG.16263 Avicennia marina HOM05D001752 ORTHO05D003933 1.8e-31 139.4 98 78.6
Potri.006G135300 Populus trichocarpa HOM05D001752 ORTHO05D003933 1.8e-31 139.4 98 78.6
MBI18_g11223_MAGBIO Magnolia biondii HOM05D001752 ORTHO05D003933 2.4e-31 139.0 98 76.5
Sabra06G0106100 Salix brachista HOM05D001752 ORTHO05D003933 2.4e-31 139.0 99 79.8
Migut.G00061 Erythranthe guttata HOM05D001752 ORTHO05D003933 3.1e-31 138.7 98 78.6
Gohir.D10G045000 Gossypium hirsutum HOM05D001752 ORTHO05D003933 3.1e-31 138.7 98 77.6
Gorai.011G047900 Gossypium raimondii HOM05D001752 ORTHO05D003933 3.1e-31 138.7 98 77.6
Nitab4.5_0000315g0070 Nicotiana tabacum HOM05D001752 ORTHO05D003933 3.1e-31 138.7 97 77.3
Nitab4.5_0002071g0040 Nicotiana tabacum HOM05D001752 ORTHO05D003933 3.1e-31 138.7 97 77.3
ECA240G4835 Erigeron canadensis HOM05D001752 ORTHO05D010592 4.0e-31 138.3 102 73.5
Lj9A714T21 Lonicera japonica HOM05D001752 ORTHO05D003933 4.0e-31 138.3 99 78.8
COL.COLO4_31013 Corchorus olitorius HOM05D001752 ORTHO05D003933 5.3e-31 137.9 98 78.6
PSO063G4095 Papaver somniferum HOM05D001752 ORTHO05D003933 5.3e-31 137.9 98 78.6
CiPaw.10G088900 Carya illinoinensis HOM05D001752 ORTHO05D003933 6.9e-31 137.5 98 76.5
PSO170G1730 Papaver somniferum HOM05D001752 ORTHO05D003933 6.9e-31 137.5 98 78.6
Ah.11g041640 Amaranthus hybridus HOM05D001752 ORTHO05D003933 9.0e-31 137.1 106 72.6
EL10Ac1g00430 Beta vulgaris HOM05D001752 ORTHO05D003933 9.0e-31 137.1 103 75.7
Cc09_g03060 Coffea canephora HOM05D001752 ORTHO05D003933 9.0e-31 137.1 97 75.3
Dinv21526 Davidia involucrata HOM05D001752 ORTHO05D003933 1.2e-30 136.7 97 78.4
Lj7A455G26 Lonicera japonica HOM05D001752 ORTHO05D003933 1.2e-30 136.7 97 76.3
Potri.010G138800 Populus trichocarpa HOM05D001752 ORTHO05D003933 1.5e-30 136.3 105 74.3
AUR62002688 Chenopodium quinoa HOM05D001752 ORTHO05D003933 2.0e-30 136.0 103 73.8
DCAR_019378 Daucus carota HOM05D001752 ORTHO05D003933 2.0e-30 136.0 97 76.3
Sc25g0002910 Simmondsia chinensis HOM05D001752 ORTHO05D003933 2.0e-30 136.0 102 75.5
Sed0015613 Sechium edule HOM05D001752 ORTHO05D003933 2.6e-30 135.6 98 74.5
ATR1098G155 Amborella trichopoda HOM05D001752 ORTHO05D003933 3.4e-30 135.2 98 71.4
Peaxi162Scf00045g02426 Petunia axillaris HOM05D001752 ORTHO05D003933 3.4e-30 135.2 97 76.3
QL05p055167 Quercus lobata HOM05D001752 ORTHO05D003933 3.4e-30 135.2 98 75.5
CDE11G1008 Ceratophyllum demersum HOM05D001752 ORTHO05D003933 4.5e-30 134.8 98 75.5
Gohir.A07G106000 Gossypium hirsutum HOM05D001752 ORTHO05D003933 4.5e-30 134.8 103 72.8
Hund10801 Selenicereus undatus HOM05D001752 ORTHO05D003933 4.5e-30 134.8 102 72.5
unitig_26.g9767 Utricularia gibba HOM05D001752 ORTHO05D003933 4.5e-30 134.8 112 69.6
HanXRQChr03g0064741 Helianthus annuus HOM05D001752 ORTHO05D003933 7.6e-30 134.0 97 74.2
Ah.02g110910 Amaranthus hybridus HOM05D001752 ORTHO05D003933 1.0e-29 133.7 97 75.3
CDE05G2585 Ceratophyllum demersum HOM05D001752 ORTHO05D003933 1.0e-29 133.7 98 75.5
Gohir.D07G109900 Gossypium hirsutum HOM05D001752 ORTHO05D003933 1.3e-29 133.3 103 70.9
Gorai.001G118100 Gossypium raimondii HOM05D001752 ORTHO05D003933 1.3e-29 133.3 103 70.9
TWI73G0250 Tripterygium wilfordii HOM05D001752 ORTHO05D003933 1.3e-29 133.3 97 76.3
Lalb_Chr05g0226141 Lupinus albus HOM05D001752 ORTHO05D003933 1.7e-29 132.9 99 72.7
Lalb_Chr09g0333981 Lupinus albus HOM05D001752 ORTHO05D003933 1.7e-29 132.9 99 72.7
MD05G1280000 Malus domestica HOM05D001752 ORTHO05D003933 2.2e-29 132.5 98 72.4
BcaNung07261 Brassica carinata HOM05D001752 ORTHO05D003933 3.8e-29 131.7 98 73.5
A03p19210 Brassica napus HOM05D001752 ORTHO05D003933 3.8e-29 131.7 98 73.5
BraA03t11176Z Brassica rapa HOM05D001752 ORTHO05D003933 3.8e-29 131.7 98 73.5
Haze_05658 Corylus avellana HOM05D001752 ORTHO05D003933 3.8e-29 131.7 102 73.5
Prupe.4G085300 Prunus persica HOM05D001752 ORTHO05D003933 3.8e-29 131.7 98 74.5
Sc19g0006420 Simmondsia chinensis HOM05D001752 ORTHO05D003933 3.8e-29 131.7 102 72.5
BcaC01g05786 Brassica carinata HOM05D001752 ORTHO05D003933 4.9e-29 131.3 98 73.5
BolC3t14624H Brassica oleracea HOM05D001752 ORTHO05D003933 4.9e-29 131.3 98 73.5
MD10G1258500 Malus domestica HOM05D001752 ORTHO05D003933 4.9e-29 131.3 98 72.4
THA.LOC104820663 Tarenaya hassleriana HOM05D001752 ORTHO05D003933 4.9e-29 131.3 98 74.5
CSS0017352 Camellia sinensis var. sinensis HOM05D001752 ORTHO05D003933 6.5e-29 131.0 98 75.5
Rhsim02G0159400 Rhododendron simsii HOM05D001752 ORTHO05D003933 6.5e-29 131.0 98 74.5
vmacro07929 Vaccinium macrocarpon HOM05D001752 ORTHO05D003933 6.5e-29 131.0 98 75.5
BraA05t20048Z Brassica rapa HOM05D001752 ORTHO05D003933 8.4e-29 130.6 98 73.5
BcaC02g11539 Brassica carinata HOM05D001752 ORTHO05D003933 1.1e-28 130.2 98 73.5
C04p14150 Brassica napus HOM05D001752 ORTHO05D003933 1.1e-28 130.2 98 73.5
Lalb_Chr16g0388861 Lupinus albus HOM05D001752 ORTHO05D003933 1.1e-28 130.2 99 70.7
Thecc.09G296000 Theobroma cacao HOM05D001752 ORTHO05D003933 1.1e-28 130.2 103 70.9
Actinidia32343 Actinidia chinensis HOM05D001752 ORTHO05D003933 1.4e-28 129.8 96 75.0
A05p11030 Brassica napus HOM05D001752 ORTHO05D003933 1.4e-28 129.8 102 74.5
C03p22410 Brassica napus HOM05D001752 ORTHO05D003933 1.4e-28 129.8 97 73.2
vmacro10964 Vaccinium macrocarpon HOM05D001752 ORTHO05D003933 1.4e-28 129.8 98 73.5
Zm00001eb224620 Zea mays HOM05D001752 ORTHO05D003933 1.4e-28 129.8 97 74.2
Aa31LG10G6720 Aethionema arabicum HOM05D001752 ORTHO05D003933 1.9e-28 129.4 98 72.4
Phvul.003G239100 Phaseolus vulgaris HOM05D001752 ORTHO05D003933 1.9e-28 129.4 99 71.7
Ca_24734_v3 Cicer arietinum L. HOM05D001752 ORTHO05D003933 2.5e-28 129.0 98 71.4
BcaB02g09520 Brassica carinata HOM05D001752 ORTHO05D003933 3.2e-28 128.6 98 72.4
RcHm_v2.0_Chr5g0014811 Rosa chinensis HOM05D001752 ORTHO05D003933 3.2e-28 128.6 103 68.9
Sp4g16900 Schrenkiella parvula HOM05D001752 ORTHO05D003933 4.2e-28 128.3 98 71.4
Lj4g0014792 Lotus japonicus HOM05D001752 ORTHO05D003933 5.5e-28 127.9 99 70.7
Os06g0678200 Oryza sativa ssp. japonica HOM05D001752 ORTHO05D003933 5.5e-28 127.9 97 75.3
Glyma.05G100400 Glycine max HOM05D001752 ORTHO05D003933 7.1e-28 127.5 99 69.7
THA.LOC104814312 Tarenaya hassleriana HOM05D001752 ORTHO05D003933 1.2e-27 126.7 97 72.2
Carub.0004s1632 Capsella rubella HOM05D001752 ORTHO05D003933 1.6e-27 126.3 98 71.4
Ca_22120_v3 Cicer arietinum L. HOM05D001752 ORTHO05D003933 1.6e-27 126.3 99 69.7
Glyma.17G166000 Glycine max HOM05D001752 ORTHO05D003933 1.6e-27 126.3 99 69.7
Thhalv10016708m.g Eutrema salsugineum HOM05D001752 ORTHO05D003933 2.1e-27 125.9 98 70.4
FvH4_3g05080 Fragaria vesca HOM05D001752 ORTHO05D003933 2.1e-27 125.9 103 68.9
PSO339G4160 Papaver somniferum HOM05D002898 ORTHO05D003933 2.1e-27 125.9 100 68.0
Medtr4g095055 Medicago truncatula HOM05D001752 ORTHO05D003933 3.5e-27 125.2 99 68.7
AT2G34630 Arabidopsis thaliana HOM05D001752 ORTHO05D003933 4.6e-27 124.8 98 70.4
arahy.Tifrunner.gnm1.ann1.HGL34I Arachis hypogaea HOM05D001752 ORTHO05D003933 7.9e-27 124.0 98 70.4
FAN16G1751 Fragaria x ananassa HOM05D001752 ORTHO05D003933 7.9e-27 124.0 103 67.0
FAN25G3064 Fragaria x ananassa HOM05D001752 ORTHO05D003933 7.9e-27 124.0 103 67.0
Lj2g0024621 Lotus japonicus HOM05D001752 ORTHO05D003933 7.9e-27 124.0 98 70.4
Actinidia39590 Actinidia chinensis HOM05D001752 ORTHO05D003933 1.0e-26 123.6 104 71.2
FAN11G3589 Fragaria x ananassa HOM05D001752 ORTHO05D003933 1.0e-26 123.6 103 67.0
AUR62030144 Chenopodium quinoa HOM05D001752 ORTHO05D003933 1.3e-26 123.2 125 60.8
Oeu030960.2 Olea europaea HOM05D001752 ORTHO05D003933 1.3e-26 123.2 96 67.7
TPR.G23860 Trifolium pratense HOM05D001752 ORTHO05D003933 1.3e-26 123.2 99 68.7
AL4G30620 Arabidopsis lyrata HOM05D001752 ORTHO05D003933 1.8e-26 122.9 98 69.4
COL.COLO4_19227 Corchorus olitorius HOM05D001752 ORTHO05D003933 1.8e-26 122.9 100 69.0
PSO541G2557 Papaver somniferum HOM05D001752 ORTHO05D003933 3.9e-26 121.7 98 70.4
PSO675G4072 Papaver somniferum HOM05D001752 ORTHO05D003933 3.9e-26 121.7 98 70.4
Atru.chr10.1119 Acer truncatum HOM05D001752 ORTHO05D003933 5.1e-26 121.3 97 69.1
CARHR128730 Cardamine hirsuta HOM05D001752 ORTHO05D003933 6.7e-26 120.9 98 68.4
HPP92_026527 Vanilla planifolia HOM05D001752 ORTHO05D003933 6.7e-26 120.9 98 69.4
HPP92_026554 Vanilla planifolia HOM05D001752 ORTHO05D003933 8.7e-26 120.6 117 59.8
AagrBONN_evm.TU.Sc2ySwM_344.3945 Anthoceros agrestis HOM05D001752 ORTHO05D003933 2.5e-25 119.0 97 67.0
THA.LOC104820661 Tarenaya hassleriana HOM05D001752 ORTHO05D003933 2.5e-25 119.0 98 68.4
Ciclev10015559m.g Citrus clementina HOM05D001752 ORTHO05D003933 4.3e-25 118.2 99 65.7
Psat4g084000 Pisum sativum HOM05D001752 ORTHO05D003933 5.7e-25 117.9 99 65.7
PSO339G0257 Papaver somniferum HOM05D002898 ORTHO05D003933 9.7e-25 117.1 98 67.3
THA.LOC104820662 Tarenaya hassleriana HOM05D001752 ORTHO05D003933 1.6e-24 116.3 98 67.3
arahy.Tifrunner.gnm1.ann1.2T8IP4 Arachis hypogaea HOM05D001752 ORTHO05D003933 2.2e-24 115.9 108 63.9
CSS0019388 Camellia sinensis var. sinensis HOM05D001752 ORTHO05D003933 6.3e-24 114.4 101 65.3
PSO675G1934 Papaver somniferum HOM05D002898 ORTHO05D003933 6.3e-24 114.4 99 67.7
Pp3c8_7380 Physcomitrium patens HOM05D001752 ORTHO05D003933 6.3e-24 114.4 97 68.0
Rhsim05G0190400 Rhododendron simsii HOM05D001752 ORTHO05D003933 6.3e-24 114.4 78 80.8
arahy.Tifrunner.gnm1.ann1.HABD5Z Arachis hypogaea HOM05D001752 ORTHO05D003933 6.9e-23 110.9 98 64.3
Thecc.06G144700 Theobroma cacao HOM05D001752 ORTHO05D003933 6.9e-23 110.9 74 82.4
PSO675G1617 Papaver somniferum HOM05D002898 ORTHO05D003933 2.6e-22 109.0 99 64.6
Gohir.A10G043800 Gossypium hirsutum HOM05D001752 ORTHO05D003933 1.7e-21 106.3 74 79.7
Thecc.06G144800 Theobroma cacao HOM05D001752 ORTHO05D003933 2.9e-21 105.5 97 62.9
Pp3c3_31610 Physcomitrium patens HOM05D001752 ORTHO05D003933 5.0e-21 104.8 98 62.2
arahy.Tifrunner.gnm1.ann1.HG5XTQ Arachis hypogaea HOM05D001752 ORTHO05D003933 6.5e-21 104.4 90 65.6
PSO063G5674 Papaver somniferum HOM05D001752 ORTHO05D003933 6.5e-21 104.4 91 64.8
PRCOL_00003890 Prasinoderma coloniale HOM05D001752 ORTHO05D003933 1.4e-20 103.2 98 61.2
Mapoly0043s0003 Marchantia polymorpha HOM05D001752 ORTHO05D003933 1.9e-20 102.8 97 60.8
Duzib192G0405 Durio zibethinus HOM05D001752 ORTHO05D003933 2.5e-20 102.4 99 60.6
CiPaw.09G120000 Carya illinoinensis HOM05D001752 ORTHO05D003933 7.2e-20 100.9 74 75.7
COL.COLO4_31015 Corchorus olitorius HOM05D001752 ORTHO05D003933 1.6e-19 99.8 96 59.4
PSO063G0049 Papaver somniferum HOM05D001752 ORTHO05D003933 1.6e-19 99.8 96 62.5
MD05G1280200 Malus domestica HOM05D001752 ORTHO05D003933 7.9e-19 97.4 75 66.7
CBR_g47123 Chara braunii HOM05D001752 ORTHO05D003933 5.1e-18 94.7 132 47.0
Duzib168G0633 Durio zibethinus HOM05D001752 ORTHO05D003933 7.4e-17 90.9 63 74.6
Zm00001eb224640 Zea mays HOM05D001752 ORTHO05D003933 3.7e-16 88.6 77 62.3
SEGI_04874 Sequoiadendron giganteum HOM05D001752 ORTHO05D003933 1.8e-15 86.3 58 74.1
SMO141G0186 Selaginella moellendorffii HOM05D001752 ORTHO05D003933 2.4e-15 85.9 84 59.5
BcaB06g28788 Brassica carinata HOM05D001752 ORTHO05D003933 1.2e-14 83.6 110 50.0
vmacro07928 Vaccinium macrocarpon HOM05D001752 ORTHO05D003933 4.5e-14 81.6 95 53.7
vmacro23235 Vaccinium macrocarpon HOM05D001752 ORTHO05D003933 4.5e-14 81.6 95 53.7
Cre12.g511700 Chlamydomonas reinhardtii HOM05D001752 ORTHO05D003933 2.5e-12 75.9 101 43.6
MCO03G218 Micromonas commoda HOM05D001752 ORTHO05D003933 2.5e-12 75.9 85 55.3
Rhsim07G0216500 Rhododendron simsii HOM05D001752 ORTHO05D003933 2.1e-11 72.8 99 49.5
Lsat_1_v5_gn_2_30340 Lactuca sativa HOM05D005112 ORTHO05D006681 1.1e-09 67.0 44 72.7
Os08g0193100 Oryza sativa ssp. japonica HOM05D001752 ORTHO05D003933 4.8e-08 61.6 52 57.7
Thecc.07G140500 Theobroma cacao HOM05D001752 ORTHO05D005237 3.4e-06 55.5 90 42.2


User provided reference genes

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