Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24701 Sapria himalayana HOM05D004596 ORTHO05D005853 3.3e-95 351.7 175 100.0
Manes.15G033300 Manihot esculenta HOM05D004596 ORTHO05D005853 8.9e-24 114.4 80 68.8
Duzib151G0659 Durio zibethinus HOM05D004596 ORTHO05D005853 1.5e-23 113.6 80 68.8
Cpa.g.sc44.129 Carica papaya HOM05D004596 ORTHO05D005853 4.4e-23 112.1 80 68.8
Gohir.A10G117700 Gossypium hirsutum HOM05D004596 ORTHO05D005853 7.5e-23 111.3 80 67.5
Gorai.011G166400 Gossypium raimondii HOM05D004596 ORTHO05D005853 7.5e-23 111.3 80 67.5
COL.COLO4_21575 Corchorus olitorius HOM05D004596 ORTHO05D005853 9.8e-23 110.9 80 67.5
TAR362G0583 Trochodendron aralioides HOM05D004596 ORTHO05D005853 9.8e-23 110.9 80 66.2
Thecc.04G239700 Theobroma cacao HOM05D004596 ORTHO05D005853 1.3e-22 110.5 80 67.5
Ciclev10004189m.g Citrus clementina HOM05D004596 ORTHO05D005853 2.9e-22 109.4 80 67.5
MD13G1201100 Malus domestica HOM05D004596 ORTHO05D005853 2.9e-22 109.4 81 60.5
Potri.010G081400 Populus trichocarpa HOM05D004596 ORTHO05D005853 3.7e-22 109.0 80 66.2
Sc13g0004790 Simmondsia chinensis HOM05D004596 ORTHO05D005853 3.7e-22 109.0 80 62.5
Gohir.D10G149100 Gossypium hirsutum HOM05D004596 ORTHO05D005853 6.4e-22 108.2 80 65.0
FAN17G0661 Fragaria x ananassa HOM05D004596 ORTHO05D005853 8.3e-22 107.8 75 66.7
FAN22G0929 Fragaria x ananassa HOM05D004596 ORTHO05D005853 8.3e-22 107.8 75 66.7
RcHm_v2.0_Chr4g0388191 Rosa chinensis HOM05D004596 ORTHO05D005853 8.3e-22 107.8 75 66.7
Dinv44581 Davidia involucrata HOM05D004596 ORTHO05D005853 1.1e-21 107.5 80 63.8
Hma1.2p1_0549F.1_g177070 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 1.1e-21 107.5 80 65.0
Hma1.2p1_0549F.1_g177080 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 1.1e-21 107.5 80 65.0
Hma1.2p1_1311F.1_g274870 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 1.1e-21 107.5 80 65.0
MBI11_g37065_MAGBIO Magnolia biondii HOM05D004596 ORTHO05D005853 1.1e-21 107.5 82 62.2
MD16G1200600 Malus domestica HOM05D004596 ORTHO05D005853 1.4e-21 107.1 81 58.0
Nn6g34173 Nelumbo nucifera HOM05D004596 ORTHO05D005853 1.4e-21 107.1 81 64.2
Prupe.1G022600 Prunus persica HOM05D004596 ORTHO05D005853 1.4e-21 107.1 79 63.3
QL06p000822 Quercus lobata HOM05D004596 ORTHO05D005853 1.4e-21 107.1 80 62.5
CiPaw.01G194700 Carya illinoinensis HOM05D004596 ORTHO05D005853 1.9e-21 106.7 81 61.7
TAR633G0587 Trochodendron aralioides HOM05D004596 ORTHO05D005853 1.9e-21 106.7 80 66.2
EL10Ac3g06528 Beta vulgaris HOM05D004596 ORTHO05D005853 2.4e-21 106.3 80 63.8
FvH4_4g01620 Fragaria vesca HOM05D004596 ORTHO05D005853 2.4e-21 106.3 75 65.3
Atru.chr4.2330 Acer truncatum HOM05D004596 ORTHO05D005853 4.1e-21 105.5 75 64.0
BraA09t42132Z Brassica rapa HOM05D004596 ORTHO05D005853 4.1e-21 105.5 81 60.5
AUR62042985 Chenopodium quinoa HOM05D004596 ORTHO05D005853 5.4e-21 105.1 80 62.5
ClCG05G004810 Citrullus lanatus HOM05D004596 ORTHO05D005853 5.4e-21 105.1 75 65.3
Eucgr.B00983 Eucalyptus grandis HOM05D004596 ORTHO05D005853 5.4e-21 105.1 80 61.2
FAN12G2122 Fragaria x ananassa HOM05D004596 ORTHO05D005853 5.4e-21 105.1 75 65.3
CsaV3_3G012850 Cucumis sativus L. HOM05D004596 ORTHO05D005853 7.1e-21 104.8 75 65.3
Thhalv10006614m.g Eutrema salsugineum HOM05D004596 ORTHO05D005853 7.1e-21 104.8 81 59.3
Sabra10G0061500 Salix brachista HOM05D004596 ORTHO05D005853 9.2e-21 104.4 80 63.8
Actinidia40113 Actinidia chinensis HOM05D004596 ORTHO05D005853 1.2e-20 104.0 80 62.5
Sabra08G0120900 Salix brachista HOM05D004596 ORTHO05D005853 1.2e-20 104.0 80 65.0
Sed0001129 Sechium edule HOM05D004596 ORTHO05D005853 1.2e-20 104.0 75 65.3
TWI73G0280 Tripterygium wilfordii HOM05D004596 ORTHO05D005853 1.2e-20 104.0 81 61.7
BcaC05g24461 Brassica carinata HOM05D004596 ORTHO05D005853 2.7e-20 102.8 81 58.0
C05p02420 Brassica napus HOM05D004596 ORTHO05D005853 2.7e-20 102.8 81 58.0
BolC5t29021H Brassica oleracea HOM05D004596 ORTHO05D005853 2.7e-20 102.8 81 58.0
BcaC07g42199 Brassica carinata HOM05D004596 ORTHO05D005853 3.5e-20 102.4 81 58.0
A09p67970 Brassica napus HOM05D004596 ORTHO05D005853 3.5e-20 102.4 81 59.3
A10p02640 Brassica napus HOM05D004596 ORTHO05D005853 3.5e-20 102.4 81 58.0
BraA10t42531Z Brassica rapa HOM05D004596 ORTHO05D005853 3.5e-20 102.4 81 58.0
Migut.N00215 Erythranthe guttata HOM05D004596 ORTHO05D005853 3.5e-20 102.4 80 58.8
Potri.008G158600 Populus trichocarpa HOM05D004596 ORTHO05D005853 3.5e-20 102.4 80 63.8
GSVIVG01018052001 Vitis vinifera HOM05D004596 ORTHO05D005853 3.5e-20 102.4 72 66.7
Actinidia04506 Actinidia chinensis HOM05D004596 ORTHO05D005853 1.0e-19 100.9 80 61.2
ECA234G3873 Erigeron canadensis HOM05D004596 ORTHO05D005853 1.0e-19 100.9 79 58.2
Ah.13g071800 Amaranthus hybridus HOM05D004596 ORTHO05D005853 1.3e-19 100.5 80 60.0
Sp1g03030 Schrenkiella parvula HOM05D004596 ORTHO05D005853 1.3e-19 100.5 81 58.0
HPP92_023539 Vanilla planifolia HOM05D004596 ORTHO05D005853 1.3e-19 100.5 82 62.2
C08p52390 Brassica napus HOM05D004596 ORTHO05D005853 1.7e-19 100.1 80 58.8
BolC8t52768H Brassica oleracea HOM05D004596 ORTHO05D005853 1.7e-19 100.1 80 58.8
CANSAT78G0708 Cannabis sativa HOM05D004596 ORTHO05D005853 1.7e-19 100.1 75 61.3
HanXRQChr10g0294771 Helianthus annuus HOM05D004596 ORTHO05D005853 1.7e-19 100.1 79 62.0
PSO210G2132 Papaver somniferum HOM05D004596 ORTHO05D005853 1.7e-19 100.1 80 61.2
AL1G13810 Arabidopsis lyrata HOM05D004596 ORTHO05D005853 2.3e-19 99.8 81 58.0
Medtr4g068740 Medicago truncatula HOM05D004596 ORTHO05D005853 3.0e-19 99.4 82 53.7
PSO461G0024 Papaver somniferum HOM05D004596 ORTHO05D005853 3.0e-19 99.4 80 60.0
CARHR003540 Cardamine hirsuta HOM05D004596 ORTHO05D005853 3.9e-19 99.0 80 57.5
DCAR_024187 Daucus carota HOM05D004596 ORTHO05D005853 3.9e-19 99.0 80 57.5
Lsat_1_v5_gn_5_103320 Lactuca sativa HOM05D004596 ORTHO05D005853 3.9e-19 99.0 79 62.0
Psat7g206760 Pisum sativum HOM05D004596 ORTHO05D005853 3.9e-19 99.0 82 53.7
RcHm_v2.0_Chr4g0437941 Rosa chinensis HOM05D004596 ORTHO05D005853 3.9e-19 99.0 79 59.5
THA.LOC104826066 Tarenaya hassleriana HOM05D004596 ORTHO05D005853 3.9e-19 99.0 81 60.5
MSTRG.4066 Avicennia marina HOM05D004596 ORTHO05D005853 5.1e-19 98.6 80 57.5
vmacro08381 Vaccinium macrocarpon HOM05D004596 ORTHO05D005853 5.1e-19 98.6 91 52.7
Cfa008428 Carpinus fangiana HOM05D004596 ORTHO05D005853 6.6e-19 98.2 80 58.8
Haze_11239 Corylus avellana HOM05D004596 ORTHO05D005853 6.6e-19 98.2 80 58.8
Lalb_Chr02g0140731 Lupinus albus HOM05D004596 ORTHO05D005853 8.6e-19 97.8 85 55.3
AT1G04210 Arabidopsis thaliana HOM05D004596 ORTHO05D005853 1.1e-18 97.4 80 57.5
Lj3C724G8 Lonicera japonica HOM05D004596 ORTHO05D005853 1.1e-18 97.4 79 60.8
Nitab4.5_0002652g0030 Nicotiana tabacum HOM05D004596 ORTHO05D005853 1.1e-18 97.4 80 57.5
TPR.G29898 Trifolium pratense HOM05D004596 ORTHO05D005853 1.1e-18 97.4 82 54.9
Carub.0001s0340 Capsella rubella HOM05D004596 ORTHO05D005853 1.5e-18 97.1 81 56.8
Lj5g0008006 Lotus japonicus HOM05D004596 ORTHO05D005853 1.5e-18 97.1 72 58.3
FAN17G0232 Fragaria x ananassa HOM05D004596 ORTHO05D005853 1.9e-18 96.7 79 58.2
PGR142G3885 Punica granatum HOM05D004596 ORTHO05D005853 1.9e-18 96.7 79 62.0
FAN07G2222 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.5e-18 96.3 79 58.2
FAN22G1518 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.5e-18 96.3 79 58.2
Nitab4.5_0000224g0010 Nicotiana tabacum HOM05D004596 ORTHO05D005853 2.5e-18 96.3 80 57.5
SEGI_05896 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 2.5e-18 96.3 80 52.5
Aa31LG1G20620 Aethionema arabicum HOM05D004596 ORTHO05D005853 3.3e-18 95.9 84 54.8
Ca_20830_v3 Cicer arietinum L. HOM05D004596 ORTHO05D005853 3.3e-18 95.9 82 52.4
FvH4_4g29700 Fragaria vesca HOM05D004596 ORTHO05D005853 3.3e-18 95.9 79 58.2
Peaxi162Scf00316g00026 Petunia axillaris HOM05D004596 ORTHO05D005853 3.3e-18 95.9 143 39.2
Thecc.08G085900 Theobroma cacao HOM05D004596 ORTHO05D005853 3.3e-18 95.9 68 64.7
Aqoxy2G03471 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 4.3e-18 95.5 82 58.5
CSS0040136 Camellia sinensis var. sinensis HOM05D004596 ORTHO05D005853 9.5e-18 94.4 75 60.0
Sopen09g031650 Solanum pennellii HOM05D004596 ORTHO05D005853 9.5e-18 94.4 80 56.2
PGSC0003DMG400030169 Solanum tuberosum HOM05D004596 ORTHO05D005853 9.5e-18 94.4 80 56.2
Aqoxy7G01427 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 1.2e-17 94.0 82 57.3
arahy.Tifrunner.gnm1.ann1.B8VWLB Arachis hypogaea HOM05D004596 ORTHO05D005853 1.6e-17 93.6 82 52.4
Rhsim04G0196700 Rhododendron simsii HOM05D004596 ORTHO05D005853 1.6e-17 93.6 69 62.3
Solyc09g082800.3 Solanum lycopersicum HOM05D004596 ORTHO05D005853 2.1e-17 93.2 80 56.2
arahy.Tifrunner.gnm1.ann1.0IB5VB Arachis hypogaea HOM05D004596 ORTHO05D005853 2.8e-17 92.8 82 52.4
Glyma.10G243000 Glycine max HOM05D004596 ORTHO05D005853 2.8e-17 92.8 76 53.9
Cc03_g04360 Coffea canephora HOM05D004596 ORTHO05D005853 4.7e-17 92.0 80 53.8
SEGI_30385 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 4.7e-17 92.0 80 51.2
ATR0665G133 Amborella trichopoda HOM05D004596 ORTHO05D005853 6.2e-17 91.7 67 61.2
Glyma.20G151300 Glycine max HOM05D004596 ORTHO05D005853 6.2e-17 91.7 76 52.6
Zm00001eb056920 Zea mays HOM05D004596 ORTHO05D005853 6.2e-17 91.7 80 52.5
CAN.G1435.8 Capsicum annuum HOM05D004596 ORTHO05D005853 1.4e-16 90.5 73 57.5
VMungo0720G1744 Vigna mungo HOM05D004596 ORTHO05D005853 2.3e-16 89.7 76 52.6
Os03g0744300 Oryza sativa ssp. japonica HOM05D004596 ORTHO05D005853 3.1e-16 89.4 79 53.2
Phvul.007G062700 Phaseolus vulgaris HOM05D004596 ORTHO05D005853 3.1e-16 89.4 76 52.6
SHI29095 Sapria himalayana HOM05D004596 ORTHO05D005853 1.5e-15 87.0 155 43.2
SHI34261 Sapria himalayana HOM05D004596 ORTHO05D005853 9.9e-15 84.3 46 80.4
Hund20642 Selenicereus undatus HOM05D004596 ORTHO05D005853 1.7e-14 83.6 99 46.5
Mapoly0005s0269 Marchantia polymorpha HOM05D004596 ORTHO05D005853 2.2e-14 83.2 78 52.6
Pp3c8_22390 Physcomitrium patens HOM05D004596 ORTHO05D005853 2.2e-14 83.2 83 50.6
SHI07929 Sapria himalayana HOM05D004596 ORTHO05D005853 8.4e-14 81.3 46 80.4
FAN12G3612 Fragaria x ananassa HOM05D004596 ORTHO05D005853 4.1e-13 79.0 54 61.1
SMO118G0545 Selaginella moellendorffii HOM05D004596 ORTHO05D005853 2.1e-12 76.6 66 53.0
SHI28614 Sapria himalayana HOM05D004596 ORTHO05D005853 6.0e-12 75.1 113 45.1
MELO3C006495.2 Cucumis melo HOM05D004596 ORTHO05D005853 1.1e-10 70.9 46 69.6
Oeu064241.3 Olea europaea HOM05D004596 ORTHO05D005853 1.5e-10 70.5 59 55.9
CBR_g34713 Chara braunii HOM05D004596 ORTHO05D005853 1.9e-10 70.1 52 61.5
CDE06G0929 Ceratophyllum demersum HOM05D004596 ORTHO05D005853 5.6e-10 68.6 81 45.7
AUR62038647 Chenopodium quinoa HOM05D004596 ORTHO05D005853 5.6e-10 68.6 46 65.2
SHI23050 Sapria himalayana HOM05D004596 ORTHO05D005853 6.8e-08 61.6 31 83.9
SHI30650 Sapria himalayana HOM05D004596 ORTHO05D005853 8.9e-08 61.2 31 83.9
SHI23426 Sapria himalayana HOM05D004596 ORTHO05D005853 2.6e-07 59.7 35 71.4
Glyma.10G111500 Glycine max HOM05D004596 ORTHO05D005853 1.3e-06 57.4 44 54.5


User provided reference genes

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