Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 4.1e-44 181.0 92 100.0
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 1.3e-18 96.3 59 76.3
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 1.7e-18 95.9 65 67.7
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 1.7e-18 95.9 58 77.6
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 1.1e-17 93.2 59 69.5
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 1.9e-17 92.4 58 74.1
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 1.9e-17 92.4 58 74.1
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 1.9e-17 92.4 58 75.9
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 1.9e-17 92.4 58 72.4
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.5e-17 92.0 59 69.5
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.5e-17 92.0 59 69.5
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 2.5e-17 92.0 58 69.0
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 3.2e-17 91.7 58 72.4
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 3.2e-17 91.7 57 73.7
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 3.2e-17 91.7 60 68.3
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 7.2e-17 90.5 58 67.2
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 7.2e-17 90.5 58 72.4
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 7.2e-17 90.5 58 72.4
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 7.2e-17 90.5 58 74.1
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 9.5e-17 90.1 58 72.4
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 9.5e-17 90.1 58 70.7
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 9.5e-17 90.1 58 70.7
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 9.5e-17 90.1 58 72.4
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 9.5e-17 90.1 58 72.4
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 1.2e-16 89.7 75 57.3
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 1.6e-16 89.4 59 67.8
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.6e-16 89.4 59 69.5
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 2.1e-16 89.0 58 70.7
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 2.1e-16 89.0 58 69.0
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 2.1e-16 89.0 58 69.0
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 2.1e-16 89.0 58 69.0
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 2.1e-16 89.0 59 67.8
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 2.8e-16 88.6 59 66.1
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 2.8e-16 88.6 58 75.9
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 2.8e-16 88.6 59 67.8
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 2.8e-16 88.6 58 75.9
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 2.8e-16 88.6 58 75.9
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 3.6e-16 88.2 58 67.2
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 3.6e-16 88.2 57 70.2
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 3.6e-16 88.2 57 70.2
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 4.7e-16 87.8 58 69.0
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 8.0e-16 87.0 58 67.2
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 8.0e-16 87.0 58 67.2
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 8.0e-16 87.0 58 67.2
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 1.0e-15 86.7 58 65.5
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 1.4e-15 86.3 58 70.7
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.3e-15 85.5 60 65.0
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 2.3e-15 85.5 57 70.2
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 3.0e-15 85.1 51 72.5
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 3.0e-15 85.1 58 74.1
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 3.0e-15 85.1 58 74.1
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 3.0e-15 85.1 58 65.5
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 4.0e-15 84.7 58 72.4
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 6.8e-15 84.0 58 62.1
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 6.8e-15 84.0 57 66.7
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 8.8e-15 83.6 58 70.7
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 1.2e-14 83.2 58 67.2
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 1.2e-14 83.2 58 67.2
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 1.2e-14 83.2 58 69.0
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 2.0e-14 82.4 58 69.0
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 3.4e-14 81.6 58 72.4
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 3.4e-14 81.6 59 64.4
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 4.4e-14 81.3 51 70.6
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 4.4e-14 81.3 58 63.8
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 4.4e-14 81.3 58 67.2
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 4.4e-14 81.3 51 68.6
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 4.4e-14 81.3 51 68.6
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 4.4e-14 81.3 51 68.6
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 5.7e-14 80.9 58 69.0
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.7e-14 80.9 58 69.0
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.7e-14 80.9 58 69.0
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.7e-14 80.9 58 69.0
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.7e-14 80.9 58 69.0
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 5.7e-14 80.9 58 67.2
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 5.7e-14 80.9 58 65.5
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 7.5e-14 80.5 58 65.5
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 7.5e-14 80.5 58 69.0
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 1.3e-13 79.7 58 65.5
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.3e-13 79.7 59 62.7
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 1.3e-13 79.7 58 62.1
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 1.7e-13 79.3 58 69.0
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 2.8e-13 78.6 58 60.3
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 2.8e-13 78.6 58 67.2
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 4.9e-13 77.8 58 63.8
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 6.3e-13 77.4 57 61.4
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 8.3e-13 77.0 57 61.4
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 1.1e-12 76.6 59 55.9
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 2.4e-12 75.5 63 60.3
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 4.1e-12 74.7 58 58.6
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 4.1e-12 74.7 44 77.3
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 5.4e-12 74.3 58 60.3
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 7.0e-12 73.9 58 58.6
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 7.0e-12 73.9 58 63.8
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 9.2e-12 73.6 58 56.9
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 3.5e-11 71.6 58 58.6
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 4.5e-11 71.2 58 58.6
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 5.9e-11 70.9 60 56.7
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 3.8e-10 68.2 42 69.0
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 1.1e-09 66.6 58 53.4
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 1.9e-09 65.9 57 56.1
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 2.5e-09 65.5 38 78.9
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 3.3e-09 65.1 47 63.8
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 3.3e-09 65.1 47 63.8
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 3.3e-09 65.1 47 63.8
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 3.3e-09 65.1 47 63.8
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 5.6e-09 64.3 57 52.6
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 5.6e-09 64.3 47 63.8
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 5.6e-09 64.3 47 63.8
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 5.6e-09 64.3 47 63.8
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 5.6e-09 64.3 40 67.5
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 5.6e-09 64.3 58 51.7
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 7.3e-09 63.9 47 63.8
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 7.3e-09 63.9 58 50.0
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 9.5e-09 63.5 58 55.2
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.1e-08 62.4 36 75.0
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.8e-08 62.0 36 75.0
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 3.6e-08 61.6 36 72.2
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 8.0e-08 60.5 36 72.2
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 8.0e-08 60.5 69 42.0
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 2.3e-07 58.9 50 50.0
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 2.3e-07 58.9 50 50.0


User provided reference genes

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