Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24349 Sapria himalayana HOM05D000452 ORTHO05D000647 1.4e-66 256.1 133 100.0
SHI03232 Sapria himalayana HOM05D000452 ORTHO05D000647 1.8e-61 239.2 134 94.0
CSS0048847 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D000647 9.1e-29 130.6 141 51.8
Hma1.2p1_0182F.1_g080630 Hydrangea macrophylla HOM05D000452 ORTHO05D000647 4.5e-28 128.3 141 54.6
Gohir.D07G028500 Gossypium hirsutum HOM05D000452 ORTHO05D000647 5.9e-28 127.9 140 53.6
TAR383G0911 Trochodendron aralioides HOM05D000452 ORTHO05D000647 7.7e-28 127.5 142 51.4
Gorai.001G029800 Gossypium raimondii HOM05D000452 ORTHO05D000647 2.9e-27 125.6 140 52.9
Cfa020873 Carpinus fangiana HOM05D000452 ORTHO05D000647 6.5e-27 124.4 144 50.7
Manes.06G040600 Manihot esculenta HOM05D000452 ORTHO05D000647 6.5e-27 124.4 139 52.5
CiPaw.15G179200 Carya illinoinensis HOM05D000452 ORTHO05D000647 8.5e-27 124.0 141 49.6
Haze_19302 Corylus avellana HOM05D000452 ORTHO05D000647 8.5e-27 124.0 143 50.3
ClCG11G003630 Citrullus lanatus HOM05D000452 ORTHO05D000647 1.1e-26 123.6 142 50.0
Manes.14G140000 Manihot esculenta HOM05D000452 ORTHO05D000647 1.1e-26 123.6 139 51.1
Nitab4.5_0000416g0020 Nicotiana tabacum HOM05D000452 ORTHO05D000647 1.9e-26 122.9 140 48.6
Lalb_Chr12g0198541 Lupinus albus HOM05D000452 ORTHO05D000647 2.5e-26 122.5 138 50.7
Nitab4.5_0004050g0030 Nicotiana tabacum HOM05D000452 ORTHO05D000647 2.5e-26 122.5 140 48.6
Glyma.17G104200 Glycine max HOM05D000452 ORTHO05D000647 4.2e-26 121.7 140 49.3
Thecc.09G037200 Theobroma cacao HOM05D000452 ORTHO05D000647 5.5e-26 121.3 141 53.2
COL.COLO4_18731 Corchorus olitorius HOM05D000452 ORTHO05D000647 7.2e-26 120.9 152 48.7
CsaV3_2G003480 Cucumis sativus L. HOM05D000452 ORTHO05D000647 7.2e-26 120.9 142 48.6
Nitab4.5_0001671g0070 Nicotiana tabacum HOM05D000452 ORTHO05D000647 9.4e-26 120.6 140 47.9
MELO3C004450.2 Cucumis melo HOM05D000452 ORTHO05D000647 1.2e-25 120.2 142 47.9
Prupe.2G038700 Prunus persica HOM05D000452 ORTHO05D000647 1.2e-25 120.2 141 48.9
VMungo1215G2021 Vigna mungo HOM05D000452 ORTHO05D000647 1.2e-25 120.2 140 47.9
Duzib150G1465 Durio zibethinus HOM05D000452 ORTHO05D000647 1.6e-25 119.8 142 51.4
Glyma.13G156600 Glycine max HOM05D000452 ORTHO05D000647 1.6e-25 119.8 140 48.6
Lj4g0005431 Lotus japonicus HOM05D000452 ORTHO05D000647 1.6e-25 119.8 139 48.2
Psat0s2644g0040 Pisum sativum HOM05D000452 ORTHO05D000647 1.6e-25 119.8 141 49.6
Dinv41415 Davidia involucrata HOM05D000452 ORTHO05D000647 2.1e-25 119.4 138 53.6
Dinv42903 Davidia involucrata HOM05D000452 ORTHO05D000647 2.1e-25 119.4 141 51.8
Dinv43198 Davidia involucrata HOM05D000452 ORTHO05D000647 2.1e-25 119.4 141 51.8
Eucgr.C04062 Eucalyptus grandis HOM05D000452 ORTHO05D000647 2.7e-25 119.0 138 49.3
Medtr2g449780 Medicago truncatula HOM05D000452 ORTHO05D000647 3.6e-25 118.6 141 48.2
BcaC07g37673 Brassica carinata HOM05D000452 ORTHO05D000647 6.1e-25 117.9 138 50.0
BolC8t48044H Brassica oleracea HOM05D000452 ORTHO05D000647 6.1e-25 117.9 138 50.0
CiPaw.16G116900 Carya illinoinensis HOM05D000452 ORTHO05D000647 8.0e-25 117.5 143 48.3
FAN01G1180 Fragaria x ananassa HOM05D000452 ORTHO05D000647 8.0e-25 117.5 138 45.7
FAN03G2109 Fragaria x ananassa HOM05D000452 ORTHO05D000647 8.0e-25 117.5 138 45.7
MSTRG.26311 Avicennia marina HOM05D000452 ORTHO05D000647 1.4e-24 116.7 136 49.3
A08p09630 Brassica napus HOM05D000452 ORTHO05D000647 1.4e-24 116.7 138 50.0
BraA08t32960Z Brassica rapa HOM05D000452 ORTHO05D000647 1.4e-24 116.7 138 50.0
Cc06_g07340 Coffea canephora HOM05D000452 ORTHO05D000647 1.4e-24 116.7 141 51.1
AT5G35180 Arabidopsis thaliana HOM05D000452 ORTHO05D000647 1.8e-24 116.3 145 47.6
CAN.G520.40 Capsicum annuum HOM05D000452 ORTHO05D000647 1.8e-24 116.3 142 47.2
FAN10G0162 Fragaria x ananassa HOM05D000452 ORTHO05D000647 1.8e-24 116.3 138 44.9
TPR.G31931 Trifolium pratense HOM05D000452 ORTHO05D000647 1.8e-24 116.3 141 49.6
Carub.0007s3101 Capsella rubella HOM05D000452 ORTHO05D000647 2.3e-24 115.9 138 49.3
QL02p091578 Quercus lobata HOM05D000452 ORTHO05D000647 3.0e-24 115.5 142 49.3
Sed0007575 Sechium edule HOM05D000452 ORTHO05D000647 3.0e-24 115.5 144 48.6
Phvul.003G175600 Phaseolus vulgaris HOM05D000452 ORTHO05D000647 4.0e-24 115.2 121 50.4
Psat4g034120 Pisum sativum HOM05D000452 ORTHO05D000647 4.0e-24 115.2 136 50.0
BcaB04g18057 Brassica carinata HOM05D000452 ORTHO05D000647 6.8e-24 114.4 138 48.6
Lj6g0026902 Lotus japonicus HOM05D000452 ORTHO05D000647 8.8e-24 114.0 143 45.5
Peaxi162Scf00347g00326 Petunia axillaris HOM05D000452 ORTHO05D000647 8.8e-24 114.0 140 47.1
Atru.chr7.196 Acer truncatum HOM05D000452 ORTHO05D000647 1.2e-23 113.6 142 51.4
Sp7g07190 Schrenkiella parvula HOM05D000452 ORTHO05D000647 1.2e-23 113.6 138 47.8
CSS0047494 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D000647 1.5e-23 113.2 141 48.2
CARHR217280 Cardamine hirsuta HOM05D000452 ORTHO05D000647 2.0e-23 112.8 138 47.8
Medtr4g116840 Medicago truncatula HOM05D000452 ORTHO05D000647 2.0e-23 112.8 141 48.2
Solyc07g005000.3 Solanum lycopersicum HOM05D000452 ORTHO05D000647 2.6e-23 112.5 140 47.1
Sopen07g001110 Solanum pennellii HOM05D000452 ORTHO05D000647 2.6e-23 112.5 140 47.1
Lj9C710G10 Lonicera japonica HOM05D000452 ORTHO05D000647 3.4e-23 112.1 130 53.1
Ciclev10007533m.g Citrus clementina HOM05D000452 ORTHO05D000647 7.5e-23 110.9 142 49.3
RcHm_v2.0_Chr1g0325641 Rosa chinensis HOM05D000452 ORTHO05D000647 7.5e-23 110.9 138 44.2
Nn2g12264 Nelumbo nucifera HOM05D000452 ORTHO05D000647 9.8e-23 110.5 143 47.6
Potri.018G113100 Populus trichocarpa HOM05D000452 ORTHO05D000647 9.8e-23 110.5 140 48.6
GSVIVG01001043001 Vitis vinifera HOM05D000452 ORTHO05D000647 9.8e-23 110.5 148 43.9
Ca_21606_v3 Cicer arietinum L. HOM05D000452 ORTHO05D000647 1.3e-22 110.2 142 47.9
Ca_21629_v3 Cicer arietinum L. HOM05D000452 ORTHO05D000647 1.3e-22 110.2 142 47.9
Thhalv10003438m.g Eutrema salsugineum HOM05D000452 ORTHO05D000647 2.2e-22 109.4 145 46.2
HanXRQChr05g0141531 Helianthus annuus HOM05D000452 ORTHO05D000647 2.2e-22 109.4 144 49.3
Phvul.009G208400 Phaseolus vulgaris HOM05D000452 ORTHO05D000647 2.2e-22 109.4 138 46.4
AL7G44030 Arabidopsis lyrata HOM05D000452 ORTHO05D000647 3.7e-22 108.6 141 46.1
SGA_v2.0_scaffold183G39856 Striga asiatica HOM05D000452 ORTHO05D000647 4.8e-22 108.2 129 48.8
THA.LOC104815402 Tarenaya hassleriana HOM05D000452 ORTHO05D000647 4.8e-22 108.2 139 45.3
Sc08g0004960 Simmondsia chinensis HOM05D000452 ORTHO05D000647 8.3e-22 107.5 138 46.4
Migut.K00364 Erythranthe guttata HOM05D000452 ORTHO05D000647 1.8e-21 106.3 140 45.0
TPR.G15783 Trifolium pratense HOM05D000452 ORTHO05D000647 1.8e-21 106.3 138 45.7
DCAR_014828 Daucus carota HOM05D000452 ORTHO05D000647 2.4e-21 105.9 142 46.5
Gohir.A07G025000 Gossypium hirsutum HOM05D000452 ORTHO05D000647 2.4e-21 105.9 140 46.4
Glyma.15G208700 Glycine max HOM05D000452 ORTHO05D000647 3.1e-21 105.5 138 49.3
Aa31LG9G6040 Aethionema arabicum HOM05D000452 ORTHO05D000647 4.1e-21 105.1 138 45.7
FvH4_7g03330 Fragaria vesca HOM05D000452 ORTHO05D000647 4.1e-21 105.1 138 44.2
FAN06G1990 Fragaria x ananassa HOM05D000452 ORTHO05D000647 4.1e-21 105.1 138 44.2
Lalb_Chr13g0301161 Lupinus albus HOM05D000452 ORTHO05D000647 5.4e-21 104.8 111 52.3
Prupe.7G253100 Prunus persica HOM05D000452 ORTHO05D000647 5.4e-21 104.8 133 47.4
Aqoxy7G03511 Aquilegia oxysepala HOM05D000452 ORTHO05D000647 9.1e-21 104.0 139 47.5
arahy.Tifrunner.gnm1.ann1.G6MTT1 Arachis hypogaea HOM05D000452 ORTHO05D000647 9.1e-21 104.0 140 45.0
CANSAT11G1350 Cannabis sativa HOM05D000452 ORTHO05D000647 9.1e-21 104.0 134 46.3
Oeu050463.2 Olea europaea HOM05D000452 ORTHO05D000647 9.1e-21 104.0 125 48.8
vmacro21878 Vaccinium macrocarpon HOM05D000452 ORTHO05D000647 9.1e-21 104.0 149 47.0
arahy.Tifrunner.gnm1.ann1.P5Q0L9 Arachis hypogaea HOM05D000452 ORTHO05D000647 1.2e-20 103.6 140 45.0
ECA236G0118 Erigeron canadensis HOM05D000452 ORTHO05D000647 2.0e-20 102.8 142 47.2
FAN23G1964 Fragaria x ananassa HOM05D000452 ORTHO05D000647 3.5e-20 102.1 133 45.1
Lsat_1_v5_gn_8_60041 Lactuca sativa HOM05D000452 ORTHO05D000647 7.7e-20 100.9 145 45.5
MD15G1157900 Malus domestica HOM05D000452 ORTHO05D000647 7.7e-20 100.9 134 44.8
Rhsim01G0049500 Rhododendron simsii HOM05D000452 ORTHO05D000647 7.7e-20 100.9 141 44.7
HanXRQChr10g0281641 Helianthus annuus HOM05D000452 ORTHO05D000647 3.8e-19 98.6 144 43.1
RcHm_v2.0_Chr2g0086461 Rosa chinensis HOM05D000452 ORTHO05D000647 3.8e-19 98.6 135 44.4
Lalb_Chr08g0233861 Lupinus albus HOM05D000452 ORTHO05D000647 5.0e-19 98.2 122 48.4
Zm00001eb041240 Zea mays HOM05D000452 ORTHO05D000647 1.9e-18 96.3 142 43.7
MD02G1283900 Malus domestica HOM05D000452 ORTHO05D000647 3.3e-18 95.5 130 45.4
Nn8g39750 Nelumbo nucifera HOM05D000452 ORTHO05D000647 5.5e-18 94.7 142 40.1
Sabra18G0096200 Salix brachista HOM05D000452 ORTHO05D000647 7.2e-18 94.4 155 42.6
PSO063G6842 Papaver somniferum HOM05D000452 ORTHO05D000647 1.2e-17 93.6 145 42.8
Gorai.009G053100 Gossypium raimondii HOM05D000452 ORTHO05D000647 2.1e-17 92.8 142 47.2
PSO421G0133 Papaver somniferum HOM05D000452 ORTHO05D000647 2.8e-17 92.4 145 42.1
VMungo1309G0535 Vigna mungo HOM05D000452 ORTHO05D000647 2.8e-17 92.4 138 42.8
EL10Ac8g18831 Beta vulgaris HOM05D000452 ORTHO05D000647 4.7e-17 91.7 125 47.2
ATR0629G037 Amborella trichopoda HOM05D000452 ORTHO05D000647 8.0e-17 90.9 150 41.3
FvH4_1g01530 Fragaria vesca HOM05D000452 ORTHO05D000647 1.4e-16 90.1 137 43.1
Os08g0439100 Oryza sativa ssp. japonica HOM05D000452 ORTHO05D000647 3.0e-16 89.0 142 41.5
Sabra06G0145500 Salix brachista HOM05D000452 ORTHO05D000647 4.0e-16 88.6 196 34.7
FAN19G0353 Fragaria x ananassa HOM05D000452 ORTHO05D000647 8.9e-16 87.4 150 42.7
FAN26G2398 Fragaria x ananassa HOM05D000452 ORTHO05D000647 8.9e-16 87.4 150 42.7
FAN28G0115 Fragaria x ananassa HOM05D000452 ORTHO05D000647 8.9e-16 87.4 150 42.7
HPP92_018516 Vanilla planifolia HOM05D000452 ORTHO05D000647 8.9e-16 87.4 141 39.7
Gohir.D05G051400 Gossypium hirsutum HOM05D000452 ORTHO05D000647 1.5e-15 86.7 123 47.2
arahy.Tifrunner.gnm1.ann1.I6E49E Arachis hypogaea HOM05D000452 ORTHO05D000647 7.5e-15 84.3 133 39.8
Gohir.A05G049600 Gossypium hirsutum HOM05D000452 ORTHO05D000647 7.5e-15 84.3 142 44.4
Sed0003353 Sechium edule HOM05D000452 ORTHO05D000647 3.7e-14 82.0 141 39.0
AUR62042022 Chenopodium quinoa HOM05D000452 ORTHO05D000647 4.9e-14 81.6 138 39.9
MBI15_g29777_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D000647 1.8e-13 79.7 108 45.4
Cpa.g.sc46.100 Carica papaya HOM05D000452 ORTHO05D000647 1.6e-12 76.6 96 47.9
MBI15_g39628_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D000647 1.7e-11 73.2 106 43.4
Ca_02495_v3 Cicer arietinum L. HOM05D000452 ORTHO05D000647 3.9e-11 72.0 104 42.3
TWI34G1684 Tripterygium wilfordii HOM05D000452 ORTHO05D000647 6.6e-11 71.2 141 37.6
HanXRQChr09g0243291 Helianthus annuus HOM05D000452 ORTHO05D000647 1.0e-08 63.9 86 43.0
AagrBONN_evm.TU.Sc2ySwM_344.1413 Anthoceros agrestis HOM05D000452 ORTHO05D000647 2.3e-08 62.8 127 28.3
unitig_736.g22222 Utricularia gibba HOM05D000452 ORTHO05D000647 3.1e-08 62.4 139 34.5
Mapoly0103s0001 Marchantia polymorpha HOM05D000452 ORTHO05D000647 5.8e-07 58.2 131 31.3
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 4.9e-06 55.1 133 35.3
Pp3c12_9430 Physcomitrium patens HOM05D000452 ORTHO05D000647 4.9e-06 55.1 136 30.9


User provided reference genes

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