Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24204 Sapria himalayana HOM05D000034 ORTHO05D000037 2.1e-73 278.9 134 100.0
SHI08039 Sapria himalayana HOM05D000034 ORTHO05D000037 2.1e-20 102.8 93 60.2
SHI23558 Sapria himalayana HOM05D008681 ORTHO05D000037 8.6e-19 97.4 76 67.1
SHI35568 Sapria himalayana HOM05D000034 ORTHO05D000037 9.9e-15 84.0 51 76.5
SHI25914 Sapria himalayana HOM05D000034 ORTHO05D000037 1.7e-14 83.2 109 45.0
SHI31185 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-13 80.5 94 52.1
SHI06235 Sapria himalayana HOM05D008681 ORTHO05D012248 2.1e-12 76.3 47 85.1
SHI20365 Sapria himalayana HOM05D000034 ORTHO05D000037 2.1e-12 76.3 121 43.0
SHI19427 Sapria himalayana HOM05D000034 ORTHO05D000037 6.0e-12 74.7 107 44.9
SHI17513 Sapria himalayana HOM05D000034 ORTHO05D000037 1.0e-11 73.9 51 70.6
SHI09837 Sapria himalayana HOM05D000034 ORTHO05D000037 2.3e-11 72.8 111 45.9
SHI29524 Sapria himalayana HOM05D000034 ORTHO05D000037 8.6e-11 70.9 40 80.0
SHI29151 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-10 70.5 51 66.7
TAR049G0003 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.1e-10 70.5 50 66.0
SHI02706 Sapria himalayana HOM05D000034 ORTHO05D000037 1.9e-10 69.7 48 66.7
SHI11769 Sapria himalayana HOM05D000034 ORTHO05D000037 3.3e-10 68.9 48 70.8
Nn7g38140 Nelumbo nucifera HOM05D000034 ORTHO05D000037 4.3e-10 68.6 119 42.9
Rhsim04G0111300 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.3e-10 68.6 111 44.1
Rhsim04G0145700 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.3e-10 68.6 111 44.1
Rhsim05G0210200 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.3e-10 68.6 111 44.1
SHI02268 Sapria himalayana HOM05D000034 ORTHO05D000037 4.3e-10 68.6 48 70.8
SHI33785 Sapria himalayana HOM05D009321 ORTHO05D000285 4.3e-10 68.6 51 68.6
Rhsim09G0068200 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.3e-10 67.8 50 68.0
SHI15738 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-09 67.0 83 51.8
SHI33987 Sapria himalayana HOM05D000034 ORTHO05D000037 1.6e-09 66.6 51 60.8
Rhsim05G0142800 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.1e-09 66.2 119 41.2
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.1e-09 66.2 119 41.2
Rhsim01G0138000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.6e-09 65.5 50 68.0
RhsimUnG0061200 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.6e-09 65.5 50 68.0
Atru.chr8.769 Acer truncatum HOM05D000034 ORTHO05D000037 8.1e-09 64.3 50 62.0
SHI27895 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-08 63.9 76 47.4
CANSAT21G2255 Cannabis sativa HOM05D000034 ORTHO05D000037 1.4e-08 63.5 50 64.0
SHI10898 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-08 63.5 50 62.0
SHI38235 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-08 63.5 50 62.0
MBI10_g20855_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.8e-08 63.2 59 54.2
CANSAT11G0549 Cannabis sativa HOM05D000034 ORTHO05D000037 2.4e-08 62.8 39 74.4
CANSAT54G1366 Cannabis sativa HOM05D000034 ORTHO05D000285 2.4e-08 62.8 39 74.4
Lj1g0002194 Lotus japonicus HOM05D000034 ORTHO05D000037 3.1e-08 62.4 48 58.3
Lj3g0012091 Lotus japonicus HOM05D000034 ORTHO05D000037 3.1e-08 62.4 48 58.3
Lj3g0012180 Lotus japonicus HOM05D000034 ORTHO05D000037 3.1e-08 62.4 48 58.3
SHI03288 Sapria himalayana HOM05D000034 ORTHO05D000037 3.1e-08 62.4 50 60.0
Lj1g0024931 Lotus japonicus HOM05D000034 ORTHO05D000037 4.0e-08 62.0 43 62.8
LjContig00141g0023111 Lotus japonicus HOM05D000034 ORTHO05D000037 4.0e-08 62.0 48 58.3
SHI33152 Sapria himalayana HOM05D000034 ORTHO05D000037 5.2e-08 61.6 50 58.0
SHI22743 Sapria himalayana HOM05D000034 ORTHO05D000037 8.9e-08 60.8 51 56.9
HanXRQChr16g0506241 Helianthus annuus HOM05D000034 ORTHO05D000037 1.2e-07 60.5 39 69.2
PSO210G5707 Papaver somniferum HOM05D000034 ORTHO05D000037 1.2e-07 60.5 47 59.6
PSO801G0789 Papaver somniferum HOM05D000034 ORTHO05D000037 1.2e-07 60.5 47 59.6
CSS0004838 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-07 60.1 39 69.2
PSO210G3506 Papaver somniferum HOM05D000034 ORTHO05D000037 1.5e-07 60.1 47 57.4
GSVIVG01035763001 Vitis vinifera HOM05D000034 ORTHO05D000037 1.5e-07 60.1 50 60.0
MELO3C034964.2 Cucumis melo HOM05D000034 ORTHO05D000037 2.0e-07 59.7 40 70.0
HanXRQChr07g0185941 Helianthus annuus HOM05D000034 ORTHO05D000037 2.0e-07 59.7 37 73.0
AUR62037954 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-07 59.3 50 62.0
MBI15_g22233_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.6e-07 59.3 50 56.0
MBI17_g08356_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.6e-07 59.3 49 55.1
PSO478G0302 Papaver somniferum HOM05D000034 ORTHO05D000037 2.6e-07 59.3 47 59.6
CSS0001522 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.9 39 66.7
CSS0002925 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.9 39 66.7
CSS0009060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.9 39 66.7
CSS0010359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.9 39 66.7
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.9 39 66.7
CANSAT21G1727 Cannabis sativa HOM05D000034 ORTHO05D000037 3.4e-07 58.9 39 69.2
PSO063G6700 Papaver somniferum HOM05D000034 ORTHO05D000037 4.4e-07 58.5 47 57.4
PSO210G0503 Papaver somniferum HOM05D000034 ORTHO05D000037 4.4e-07 58.5 47 57.4
PSO210G2784 Papaver somniferum HOM05D000034 ORTHO05D000037 4.4e-07 58.5 47 57.4
PSO675G1246 Papaver somniferum HOM05D000034 ORTHO05D000037 4.4e-07 58.5 47 57.4
PSO782G3468 Papaver somniferum HOM05D000034 ORTHO05D000037 4.4e-07 58.5 47 57.4
TWI34G1639 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.4e-07 58.5 39 66.7
TWI36G1086 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.4e-07 58.5 39 66.7
TWI74G1505 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.4e-07 58.5 39 66.7
PSO561G0039 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-07 58.2 47 57.4
SHI02034 Sapria himalayana HOM05D000034 ORTHO05D000037 5.8e-07 58.2 50 56.0
Aqoxy4G01435 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 7.6e-07 57.8 38 71.1
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 7.6e-07 57.8 38 71.1
CANSAT01G2546 Cannabis sativa HOM05D000034 ORTHO05D000037 7.6e-07 57.8 39 69.2
CANSAT25G1613 Cannabis sativa HOM05D000034 ORTHO05D000037 7.6e-07 57.8 39 69.2
MBI01_g38804_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 7.6e-07 57.8 51 52.9
PSO528G0094 Papaver somniferum HOM05D000034 ORTHO05D000037 7.6e-07 57.8 49 59.2
SHI22348 Sapria himalayana HOM05D008681 ORTHO05D012248 7.6e-07 57.8 38 78.9
HanXRQChr12g0361021 Helianthus annuus HOM05D000034 ORTHO05D000037 9.9e-07 57.4 37 70.3
MBI06_g21009_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 9.9e-07 57.4 88 39.8
PSO170G6726 Papaver somniferum HOM05D000034 ORTHO05D000037 9.9e-07 57.4 47 57.4
PSO210G2901 Papaver somniferum HOM05D000034 ORTHO05D000285 9.9e-07 57.4 47 57.4
SHI13850 Sapria himalayana HOM05D000034 ORTHO05D000037 9.9e-07 57.4 58 51.7
SHI20928 Sapria himalayana HOM05D000034 ORTHO05D000037 9.9e-07 57.4 114 39.5
CSS0015900 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 57.0 39 64.1
MBI03_g09116_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.3e-06 57.0 51 49.0
MBI18_g26297_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.3e-06 57.0 48 56.2
SHI10452 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-06 57.0 43 65.1
SHI11570 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-06 57.0 43 62.8
SHI34904 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-06 57.0 63 54.0
CSS0041293 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.7e-06 56.6 39 64.1
CANSAT64G1448 Cannabis sativa HOM05D000034 ORTHO05D000037 1.7e-06 56.6 39 66.7
MBI08_g00970_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.7e-06 56.6 51 52.9
MBI18_g01503_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.7e-06 56.6 50 54.0
MBI19_g18847_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.7e-06 56.6 48 54.2
QL01p050021 Quercus lobata HOM05D000034 ORTHO05D000037 1.7e-06 56.6 48 54.2
CANSAT01G1210 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-06 56.2 39 66.7
CANSAT25G2314 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-06 56.2 39 66.7
CANSAT54G1197 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-06 56.2 39 66.7
CANSAT54G2552 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-06 56.2 39 66.7
CANSAT80G1286 Cannabis sativa HOM05D000034 ORTHO05D000037 2.2e-06 56.2 39 66.7
MBI08_g29137_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.2e-06 56.2 50 48.0
PSO339G0656 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-06 56.2 47 55.3
Rhsim11G0185300 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-06 56.2 39 66.7
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-06 56.2 39 66.7
Aqoxy4G01816 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.9e-06 55.8 40 62.5
CSS0001254 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-06 55.8 39 64.1
CSS0041691 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-06 55.8 39 61.5
CANSAT01G0970 Cannabis sativa HOM05D000034 ORTHO05D000037 2.9e-06 55.8 39 66.7
CANSAT25G1047 Cannabis sativa HOM05D000034 ORTHO05D000037 2.9e-06 55.8 39 66.7
MBI05_g05688_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.9e-06 55.8 56 46.4
MBI07_g05325_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.9e-06 55.8 51 51.0
SHI09297 Sapria himalayana HOM05D000034 ORTHO05D000037 2.9e-06 55.8 50 54.0
Aqoxy2G01340 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 3.8e-06 55.5 106 38.7
ECA232G0123 Erigeron canadensis HOM05D000034 ORTHO05D000037 3.8e-06 55.5 104 41.3
Hma1.2p1_0868F.1_g230465 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.8e-06 55.5 49 59.2
MBI01_g42393_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.8e-06 55.5 51 47.1
MBI10_g03022_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.8e-06 55.5 51 52.9
PGR142G3889 Punica granatum HOM05D000034 ORTHO05D000037 3.8e-06 55.5 76 39.5
SHI32009 Sapria himalayana HOM05D008681 ORTHO05D365910 3.8e-06 55.5 67 52.2
SHI40011 Sapria himalayana HOM05D000034 ORTHO05D000037 3.8e-06 55.5 52 61.5
CANSAT64G2284 Cannabis sativa HOM05D000034 ORTHO05D000037 4.9e-06 55.1 35 71.4
CANSAT80G2513 Cannabis sativa HOM05D000034 ORTHO05D000037 4.9e-06 55.1 37 67.6
HanXRQChr03g0077651 Helianthus annuus HOM05D000034 ORTHO05D000037 4.9e-06 55.1 115 35.7
MBI01_g12901_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 4.9e-06 55.1 96 39.6
MBI01_g29008_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 4.9e-06 55.1 40 62.5
MBI03_g24253_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 4.9e-06 55.1 49 51.0
MBI14_g15656_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 4.9e-06 55.1 48 50.0
PSO017G3185 Papaver somniferum HOM05D000034 ORTHO05D000037 4.9e-06 55.1 39 64.1
Atru.chr5.2512 Acer truncatum HOM05D000034 ORTHO05D000037 6.4e-06 54.7 49 57.1
Aqoxy7G01723 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.4e-06 54.7 39 66.7
BcaB08g37260 Brassica carinata HOM05D000034 ORTHO05D000037 6.4e-06 54.7 52 48.1
MBI15_g03056_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.4e-06 54.7 51 47.1
MBI17_g31911_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 6.4e-06 54.7 42 59.5
PSO210G7822 Papaver somniferum HOM05D000034 ORTHO05D000037 6.4e-06 54.7 47 55.3
Aqoxy1G03317 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.4e-06 54.3 39 66.7
Aqoxy2G02168 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.4e-06 54.3 39 66.7
Aqoxy3G02330 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.4e-06 54.3 40 62.5
Haze_19363 Corylus avellana HOM05D000034 ORTHO05D000037 8.4e-06 54.3 51 52.9
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 8.4e-06 54.3 37 64.9
MBI14_g10251_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.4e-06 54.3 51 45.1
MBI14_g17384_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.4e-06 54.3 51 51.0
MBI19_g09387_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.4e-06 54.3 40 60.0
SHI03909 Sapria himalayana HOM05D000034 ORTHO05D000037 8.4e-06 54.3 105 39.0
SHI16926 Sapria himalayana HOM05D000034 ORTHO05D000037 8.4e-06 54.3 50 54.0


User provided reference genes

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