Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI23848 Sapria himalayana HOM05D001750 ORTHO05D001825 3.2e-81 305.1 156 100.0
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 1.3e-29 133.7 192 45.3
RhsimMtG0004100 Rhododendron simsii HOM05D001750 ORTHO05D001825 1.4e-28 130.2 207 42.0
SabraMtG0002600 Salix brachista HOM05D001750 ORTHO05D001825 1.0e-26 124.0 255 37.6
arahy.Tifrunner.gnm1.ann1.KJ11LV Arachis hypogaea HOM05D001750 ORTHO05D001825 6.7e-23 111.3 84 69.0
SGA_v2.0_scaffold245G44452 Striga asiatica HOM05D001750 ORTHO05D001825 5.7e-22 108.2 106 57.5
BolSC28t60419H Brassica oleracea HOM05D001750 ORTHO05D001825 7.4e-22 107.8 72 75.0
BraSC224t45818Z Brassica rapa HOM05D001750 ORTHO05D001825 7.4e-22 107.8 72 75.0
BraSC77t46634Z Brassica rapa HOM05D001750 ORTHO05D001825 7.4e-22 107.8 72 75.0
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 1.3e-21 107.1 261 34.5
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 4.8e-21 105.1 79 69.6
MBI06_g25392_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 1.4e-20 103.6 70 72.9
AUR62042330 Chenopodium quinoa HOM05D006320 ORTHO05D007069 1.8e-20 103.2 68 75.0
ATMG00513 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 9.1e-20 100.9 70 74.3
SHI48909 Sapria himalayana HOM05D001750 ORTHO05D001825 9.1e-20 100.9 88 62.5
TPR.G18545 Trifolium pratense HOM05D001750 ORTHO05D001825 7.7e-19 97.8 66 75.8
PSO017G5352 Papaver somniferum HOM05D001750 ORTHO05D001825 1.9e-17 93.2 65 70.8
Nitab4.5_0000172g1800 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.7e-16 89.4 62 71.0
Lalb_Chr02g0153691 Lupinus albus HOM05D001750 ORTHO05D001825 1.4e-15 87.0 72 65.3
Nitab4.5_0001152g0440 Nicotiana tabacum HOM05D005210 ORTHO05D010080 3.0e-15 85.9 61 68.9
Nitab4.5_0000593g0150 Nicotiana tabacum HOM05D005210 ORTHO05D010080 1.1e-14 84.0 63 65.1
FvH4_6g34420 Fragaria vesca HOM05D001750 ORTHO05D001825 3.3e-14 82.4 60 73.3
Aa31sc483G10 Aethionema arabicum HOM05D001750 ORTHO05D001825 4.4e-14 82.0 60 73.3
Lalb_Chr16g0386151 Lupinus albus HOM05D001750 ORTHO05D001825 2.2e-13 79.7 51 76.5
Lalb_Chr17g0337351 Lupinus albus HOM05D001750 ORTHO05D001825 4.8e-13 78.6 51 76.5
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 2.4e-12 76.3 206 33.5
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 2.4e-12 76.3 206 33.5
SHI35587 Sapria himalayana HOM05D008193 ORTHO05D010324 1.0e-10 70.9 47 80.9
Nitab4.5_0000172g0080 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.9e-10 69.3 59 62.7
Nitab4.5_0001788g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 8.5e-10 67.8 57 63.2
Mapoly0141s0034 Marchantia polymorpha HOM05D001750 ORTHO05D001825 1.5e-09 67.0 62 54.8
Ca_15051_v3 Cicer arietinum L. HOM05D001750 ORTHO05D010080 1.8e-07 60.1 91 45.1
Actinidia34923 Actinidia chinensis HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
arahy.Tifrunner.gnm1.ann1.BE3YYP Arachis hypogaea HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
arahy.Tifrunner.gnm1.ann1.KHE2M7 Arachis hypogaea HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 7.5e-06 54.7 32 75.0
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
Hma1.2p1_0034F.1_g021420 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
Hma1.2p1_1529F.1_g289140 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
Lalb_Chr17g0337371 Lupinus albus HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
Nitab4.5_0000593g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 7.5e-06 54.7 53 54.7
Phvul.005G088400 Phaseolus vulgaris HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
SalBow1G5977 Salvia bowleyana HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
TPR.G28320 Trifolium pratense HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7
VMungo0329G0001 Vigna mungo HOM05D001750 ORTHO05D001825 7.5e-06 54.7 54 53.7


User provided reference genes

Program Settings