Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI23572 Sapria himalayana HOM05D008681 ORTHO05D000037 4.2e-49 197.6 93 100.0
SHI08819 Sapria himalayana HOM05D008681 ORTHO05D000037 3.9e-34 147.9 93 76.3
SHI29017 Sapria himalayana HOM05D008681 ORTHO05D012248 7.1e-28 127.1 83 75.9
SHI29028 Sapria himalayana HOM05D008681 ORTHO05D012248 7.1e-28 127.1 83 75.9
SHI28292 Sapria himalayana HOM05D008681 ORTHO05D012248 2.6e-22 108.6 83 69.9
SHI09837 Sapria himalayana HOM05D000034 ORTHO05D000037 2.7e-19 98.6 90 61.1
SHI22508 Sapria himalayana HOM05D008681 ORTHO05D012248 1.3e-18 96.3 93 58.1
SHI06119 Sapria himalayana HOM05D000034 ORTHO05D000037 1.5e-17 92.8 84 59.5
SHI20645 Sapria himalayana HOM05D008681 ORTHO05D000037 3.6e-16 88.2 52 78.8
SHI12281 Sapria himalayana HOM05D008681 ORTHO05D012248 1.4e-15 86.3 93 52.7
SHI09403 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-14 83.2 40 90.0
SHI10579 Sapria himalayana HOM05D000034 ORTHO05D000037 2.6e-14 82.0 40 90.0
SHI12916 Sapria himalayana HOM05D008681 ORTHO05D000037 2.6e-14 82.0 64 62.5
SHI17606 Sapria himalayana HOM05D008681 ORTHO05D000037 1.3e-13 79.7 93 51.6
SHI11206 Sapria himalayana HOM05D000034 ORTHO05D000037 6.4e-13 77.4 40 82.5
Nn7g38140 Nelumbo nucifera HOM05D000034 ORTHO05D000037 1.9e-12 75.9 40 80.0
SHI03909 Sapria himalayana HOM05D000034 ORTHO05D000037 1.9e-12 75.9 40 80.0
SHI20142 Sapria himalayana HOM05D000034 ORTHO05D000037 1.9e-12 75.9 40 75.0
SHI22825 Sapria himalayana HOM05D008681 ORTHO05D012248 3.2e-12 75.1 49 73.5
SHI08359 Sapria himalayana HOM05D008681 ORTHO05D000037 5.4e-12 74.3 43 76.7
SHI20365 Sapria himalayana HOM05D000034 ORTHO05D000037 5.4e-12 74.3 40 82.5
SHI20928 Sapria himalayana HOM05D000034 ORTHO05D000037 9.3e-12 73.6 40 82.5
SHI29187 Sapria himalayana HOM05D000034 ORTHO05D000037 1.6e-11 72.8 44 75.0
Rhsim06G0160000 Rhododendron simsii HOM05D000034 ORTHO05D000285 2.1e-11 72.4 40 77.5
SHI16501 Sapria himalayana HOM05D008681 ORTHO05D012248 2.1e-11 72.4 47 76.6
Rhsim05G0142800 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.5e-11 71.6 40 77.5
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.5e-11 71.6 40 77.5
SHI06118 Sapria himalayana HOM05D000034 ORTHO05D000037 1.0e-10 70.1 36 83.3
SHI19427 Sapria himalayana HOM05D000034 ORTHO05D000037 3.0e-10 68.6 42 69.0
SHI22076 Sapria himalayana HOM05D000034 ORTHO05D000037 3.0e-10 68.6 44 70.5
SHI29188 Sapria himalayana HOM05D008681 ORTHO05D367496 3.0e-10 68.6 44 79.5
SHI04621 Sapria himalayana HOM05D008681 ORTHO05D000037 3.9e-10 68.2 36 80.6
Rhsim04G0111300 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.1e-10 67.8 36 80.6
Rhsim04G0145700 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.1e-10 67.8 36 80.6
Rhsim05G0210200 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.1e-10 67.8 36 80.6
SHI22744 Sapria himalayana HOM05D000034 ORTHO05D000037 8.7e-10 67.0 36 80.6
HanXRQChr03g0077651 Helianthus annuus HOM05D000034 ORTHO05D000037 1.1e-09 66.6 40 70.0
Rhsim04G0146200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.1e-09 66.6 39 74.4
SHI25914 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-09 66.6 35 80.0
SHI25967 Sapria himalayana HOM05D008681 ORTHO05D012248 1.1e-09 66.6 50 72.0
SHI00882 Sapria himalayana HOM05D000034 ORTHO05D000037 1.5e-09 66.2 35 80.0
SHI22348 Sapria himalayana HOM05D008681 ORTHO05D012248 1.9e-09 65.9 54 64.8
SHI28149 Sapria himalayana HOM05D008681 ORTHO05D012248 1.9e-09 65.9 44 70.5
HanXRQChr12g0382961 Helianthus annuus HOM05D000034 ORTHO05D000037 5.6e-09 64.3 40 67.5
SHI25303 Sapria himalayana HOM05D008681 ORTHO05D012248 5.6e-09 64.3 44 75.0
SHI26100 Sapria himalayana HOM05D008593 ORTHO05D010518 7.3e-09 63.9 106 37.7
SHI17068 Sapria himalayana HOM05D008681 ORTHO05D000037 9.6e-09 63.5 41 73.2
SHI00988 Sapria himalayana HOM05D008681 ORTHO05D012248 1.3e-08 63.2 44 72.7
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.6e-08 62.8 40 65.0
SHI33786 Sapria himalayana HOM05D008681 ORTHO05D012248 2.1e-08 62.4 47 66.0
SHI06235 Sapria himalayana HOM05D008681 ORTHO05D012248 3.6e-08 61.6 42 73.8
HanXRQChr10g0279481 Helianthus annuus HOM05D000034 ORTHO05D000285 4.8e-08 61.2 40 65.0
Rhsim09G0068200 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.8e-08 61.2 34 76.5
SHI13476 Sapria himalayana HOM05D008681 ORTHO05D012248 4.8e-08 61.2 43 72.1
CANSAT64G2926 Cannabis sativa HOM05D000034 ORTHO05D000037 6.2e-08 60.8 42 59.5
HanXRQChr07g0185941 Helianthus annuus HOM05D000034 ORTHO05D000037 6.2e-08 60.8 40 65.0
PSO832G4219 Papaver somniferum HOM05D000034 ORTHO05D000037 6.2e-08 60.8 40 65.0
Rhsim01G0195900 Rhododendron simsii HOM05D000084 ORTHO05D002966 6.2e-08 60.8 52 55.8
SHI02583 Sapria himalayana HOM05D008681 ORTHO05D006881 6.2e-08 60.8 37 78.4
Aqoxy1G03317 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.1e-08 60.5 40 65.0
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 8.1e-08 60.5 40 62.5
SHI03643 Sapria himalayana HOM05D001260 ORTHO05D002424 1.1e-07 60.1 53 56.6
SHI32230 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-07 60.1 46 65.2
SHI23384 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-07 59.7 40 62.5
SHI06465 Sapria himalayana HOM05D016041 ORTHO05D012248 1.8e-07 59.3 45 71.1
SHI03288 Sapria himalayana HOM05D000034 ORTHO05D000037 2.4e-07 58.9 42 59.5
SHI10898 Sapria himalayana HOM05D000034 ORTHO05D000037 2.4e-07 58.9 42 59.5
SHI19866 Sapria himalayana HOM05D009321 ORTHO05D000285 2.4e-07 58.9 32 78.1
SHI38235 Sapria himalayana HOM05D000034 ORTHO05D000037 2.4e-07 58.9 42 59.5
Aqoxy1G02789 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 3.1e-07 58.5 42 54.8
Aqoxy2G01242 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 3.1e-07 58.5 42 54.8
Aqoxy5G02543 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.0e-07 58.2 42 54.8
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 4.0e-07 58.2 42 50.0
TWI14G0766 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.0e-07 58.2 42 59.5
TWI39G1305 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.0e-07 58.2 42 59.5
Atru.chr10.1596 Acer truncatum HOM05D000034 ORTHO05D000037 5.3e-07 57.8 42 54.8
CANSAT01G2719 Cannabis sativa HOM05D000034 ORTHO05D000037 6.9e-07 57.4 42 54.8
HanXRQChr12g0372731 Helianthus annuus HOM05D000034 ORTHO05D000037 6.9e-07 57.4 42 57.1
ECA233G5785 Erigeron canadensis HOM05D001746 ORTHO05D001823 9.0e-07 57.0 35 68.6
ECA234G2067 Erigeron canadensis HOM05D000034 ORTHO05D000037 9.0e-07 57.0 42 54.8
HanXRQChr11g0331041 Helianthus annuus HOM05D000034 ORTHO05D000037 9.0e-07 57.0 39 59.0
TWI23G0160 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.0e-07 57.0 42 57.1
TWI34G0916 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.0e-07 57.0 42 57.1
TWI34G1702 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.0e-07 57.0 42 57.1
TWI38G2340 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.0e-07 57.0 42 57.1
TWI75G1126 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.0e-07 57.0 42 57.1
Cc02_g10140 Coffea canephora HOM05D000034 ORTHO05D000037 1.2e-06 56.6 42 52.4
ECA240G4515 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.2e-06 56.6 40 57.5
Psat5g170880 Pisum sativum HOM05D000034 ORTHO05D000037 1.2e-06 56.6 42 57.1
SHI14955 Sapria himalayana HOM05D008681 ORTHO05D002424 1.2e-06 56.6 44 61.4
TWI60G0087 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.2e-06 56.6 42 54.8
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 1.5e-06 56.2 42 54.8
Hma1.2p1_0868F.1_g230465 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.5e-06 56.2 42 57.1
PSO210G0503 Papaver somniferum HOM05D000034 ORTHO05D000037 1.5e-06 56.2 40 57.5
SHI11653 Sapria himalayana HOM05D000034 ORTHO05D000037 1.5e-06 56.2 40 67.5
SHI50258 Sapria himalayana HOM05D000034 ORTHO05D000037 1.5e-06 56.2 40 67.5
TWI53G0605 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.5e-06 56.2 42 54.8
AUR62009279 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.0e-06 55.8 40 55.0
Cc06_g20430 Coffea canephora HOM05D000034 ORTHO05D000037 2.0e-06 55.8 42 52.4
Hma1.2p1_0729F.1_g209640 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-06 55.8 42 57.1
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 2.0e-06 55.8 42 57.1
SHI05889 Sapria himalayana HOM05D000034 ORTHO05D000037 2.0e-06 55.8 32 78.1
arahy.Tifrunner.gnm1.ann1.W62SBL Arachis hypogaea HOM05D000034 ORTHO05D000037 2.6e-06 55.5 42 52.4
AUR62037763 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-06 55.5 40 55.0
ECA233G1549 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.6e-06 55.5 42 52.4
PSO832G2050 Papaver somniferum HOM05D000034 ORTHO05D000037 2.6e-06 55.5 42 54.8
TPR.G30701 Trifolium pratense HOM05D000034 ORTHO05D000037 2.6e-06 55.5 42 54.8
ECA246G4856 Erigeron canadensis HOM05D001083 ORTHO05D001637 3.4e-06 55.1 42 50.0
Lj3g0017061 Lotus japonicus HOM05D000034 ORTHO05D000037 3.4e-06 55.1 42 52.4
LjContig00272g0009285 Lotus japonicus HOM05D000034 ORTHO05D000037 3.4e-06 55.1 42 52.4
QL08p042355 Quercus lobata HOM05D000034 ORTHO05D000037 3.4e-06 55.1 42 52.4
SHI04942 Sapria himalayana HOM05D007516 ORTHO05D000285 3.4e-06 55.1 31 74.2
TWI75G1289 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.4e-06 55.1 42 57.1
ECA233G0323 Erigeron canadensis HOM05D000034 ORTHO05D000037 4.4e-06 54.7 42 52.4
PSO170G6726 Papaver somniferum HOM05D000034 ORTHO05D000037 4.4e-06 54.7 40 57.5
PSO210G5707 Papaver somniferum HOM05D000034 ORTHO05D000037 4.4e-06 54.7 40 57.5
PSO478G0302 Papaver somniferum HOM05D000034 ORTHO05D000037 4.4e-06 54.7 40 57.5
PSO801G0789 Papaver somniferum HOM05D000034 ORTHO05D000037 4.4e-06 54.7 40 57.5
RcHm_v2.0_Chr7g0199291 Rosa chinensis HOM05D000034 ORTHO05D000037 4.4e-06 54.7 42 57.1
Aqoxy3G01210 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 5.8e-06 54.3 40 60.0
arahy.Tifrunner.gnm1.ann1.6ZUM64 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.8e-06 54.3 42 52.4
ECA247G4088 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-06 54.3 33 66.7
HanXRQChr03g0088121 Helianthus annuus HOM05D000034 ORTHO05D000037 5.8e-06 54.3 42 54.8
HanXRQChr07g0199291 Helianthus annuus HOM05D000034 ORTHO05D000037 5.8e-06 54.3 42 54.8
PSO063G4406 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-06 54.3 40 57.5
PSO063G6700 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-06 54.3 40 57.5
PSO063G6922 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-06 54.3 42 52.4
PSO210G4734 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-06 54.3 40 57.5
PSO210G4967 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-06 54.3 42 52.4
PSO210G7822 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-06 54.3 40 57.5
PSO541G0934 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-06 54.3 40 57.5
PSO782G3468 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-06 54.3 40 57.5
TPR.G25730 Trifolium pratense HOM05D000034 ORTHO05D000037 5.8e-06 54.3 42 54.8
CSS0001254 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.6e-06 53.9 42 57.1
CSS0001522 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.6e-06 53.9 42 57.1
CSS0002925 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.6e-06 53.9 42 57.1
CSS0004838 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.6e-06 53.9 42 57.1
CSS0009060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.6e-06 53.9 42 57.1
CSS0010359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.6e-06 53.9 42 57.1
CSS0015900 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.6e-06 53.9 42 57.1
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.6e-06 53.9 42 57.1
PSO675G1246 Papaver somniferum HOM05D000034 ORTHO05D000037 7.6e-06 53.9 40 57.5
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 7.6e-06 53.9 42 54.8
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.9e-06 53.5 40 57.5
arahy.Tifrunner.gnm1.ann1.GL17HH Arachis hypogaea HOM05D000034 ORTHO05D000037 9.9e-06 53.5 42 47.6
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 9.9e-06 53.5 42 47.6
arahy.Tifrunner.gnm1.ann1.X5RLQI Arachis hypogaea HOM05D000034 ORTHO05D000285 9.9e-06 53.5 42 47.6
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 9.9e-06 53.5 42 47.6
HanXRQChr10g0313541 Helianthus annuus HOM05D000034 ORTHO05D000037 9.9e-06 53.5 42 52.4
TPR.G19328 Trifolium pratense HOM05D000034 ORTHO05D000037 9.9e-06 53.5 43 55.8


User provided reference genes

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