Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI23482 Sapria himalayana HOM05D002352 ORTHO05D043285 9.6e-65 250.0 124 100.0
MD01G1232200 Malus domestica HOM05D002352 ORTHO05D003724 1.5e-38 162.9 100 79.0
MD07G1304000 Malus domestica HOM05D002352 ORTHO05D003724 1.5e-38 162.9 100 79.0
Prupe.1G083500 Prunus persica HOM05D002352 ORTHO05D003724 3.4e-38 161.8 100 79.0
Thecc.06G016700 Theobroma cacao HOM05D002352 ORTHO05D003724 1.3e-37 159.8 100 78.0
Lalb_Chr21g0313661 Lupinus albus HOM05D002352 ORTHO05D003724 5.0e-37 157.9 100 75.0
COL.COLO4_22862 Corchorus olitorius HOM05D002352 ORTHO05D003724 1.1e-36 156.8 100 76.0
Lalb_Chr02g0152081 Lupinus albus HOM05D002352 ORTHO05D003724 1.1e-36 156.8 100 75.0
Potri.001G443200 Populus trichocarpa HOM05D002352 ORTHO05D003724 1.1e-36 156.8 100 76.0
PGR004G1771 Punica granatum HOM05D002352 ORTHO05D003724 1.1e-36 156.8 98 78.6
CANSAT21G2414 Cannabis sativa HOM05D002352 ORTHO05D003724 1.4e-36 156.4 100 75.0
MELO3C007036.2 Cucumis melo HOM05D002352 ORTHO05D003724 1.9e-36 156.0 103 71.8
Hund21252 Selenicereus undatus HOM05D002352 ORTHO05D003724 1.9e-36 156.0 100 74.0
Actinidia07573 Actinidia chinensis HOM05D002352 ORTHO05D003724 2.5e-36 155.6 99 75.8
CsaV3_6G052730 Cucumis sativus L. HOM05D002352 ORTHO05D003724 3.2e-36 155.2 102 72.5
Potri.011G153700 Populus trichocarpa HOM05D002352 ORTHO05D003724 3.2e-36 155.2 100 75.0
Dinv40531 Davidia involucrata HOM05D002352 ORTHO05D003724 4.2e-36 154.8 99 74.7
Gohir.A05G113200 Gossypium hirsutum HOM05D002352 ORTHO05D003724 5.5e-36 154.5 101 73.3
Gorai.009G117700 Gossypium raimondii HOM05D002352 ORTHO05D003724 5.5e-36 154.5 101 73.3
Gohir.D05G113700 Gossypium hirsutum HOM05D002352 ORTHO05D003724 7.2e-36 154.1 101 73.3
QL05p065250 Quercus lobata HOM05D002352 ORTHO05D003724 7.2e-36 154.1 98 75.5
Sabra16G0299900 Salix brachista HOM05D002352 ORTHO05D003724 7.2e-36 154.1 100 74.0
Sabra16G0301500 Salix brachista HOM05D002352 ORTHO05D003724 7.2e-36 154.1 100 74.0
Ciclev10014013m.g Citrus clementina HOM05D002352 ORTHO05D003724 9.4e-36 153.7 98 77.6
Lj5g0002534 Lotus japonicus HOM05D002352 ORTHO05D003724 9.4e-36 153.7 100 72.0
Manes.16G062100 Manihot esculenta HOM05D002352 ORTHO05D003724 9.4e-36 153.7 100 75.0
Rhsim02G0123500 Rhododendron simsii HOM05D002352 ORTHO05D003724 9.4e-36 153.7 99 72.7
TWI32G1048 Tripterygium wilfordii HOM05D002352 ORTHO05D003724 1.2e-35 153.3 101 73.3
ECA236G2885 Erigeron canadensis HOM05D002352 ORTHO05D003724 1.6e-35 152.9 99 71.7
Lj2C285G5 Lonicera japonica HOM05D002352 ORTHO05D003724 1.6e-35 152.9 99 71.7
Sabra11G0146000 Salix brachista HOM05D002352 ORTHO05D003724 1.6e-35 152.9 100 74.0
ClCG01G025480 Citrullus lanatus HOM05D002352 ORTHO05D003724 2.1e-35 152.5 102 69.6
Dinv07525 Davidia involucrata HOM05D002352 ORTHO05D003724 2.1e-35 152.5 99 72.7
MSTRG.7313 Avicennia marina HOM05D002352 ORTHO05D003724 2.7e-35 152.1 99 71.7
CAN.G1627.24 Capsicum annuum HOM05D002352 ORTHO05D003724 2.7e-35 152.1 99 72.7
CiPaw.08G016100 Carya illinoinensis HOM05D002352 ORTHO05D003724 2.7e-35 152.1 99 74.7
Duzib160G0039 Durio zibethinus HOM05D002352 ORTHO05D003724 2.7e-35 152.1 99 73.7
Peaxi162Scf00524g00056 Petunia axillaris HOM05D002352 ORTHO05D003724 2.7e-35 152.1 99 72.7
Phvul.007G099200 Phaseolus vulgaris HOM05D002352 ORTHO05D003724 2.7e-35 152.1 101 71.3
AUR62014778 Chenopodium quinoa HOM05D002352 ORTHO05D003724 3.6e-35 151.8 98 72.4
Sed0013080 Sechium edule HOM05D002352 ORTHO05D003724 3.6e-35 151.8 102 68.6
TWI60G0805 Tripterygium wilfordii HOM05D002352 ORTHO05D003724 3.6e-35 151.8 101 72.3
TAR626G1549 Trochodendron aralioides HOM05D002352 ORTHO05D003724 3.6e-35 151.8 98 75.5
Glyma.10G207500 Glycine max HOM05D002352 ORTHO05D003724 4.7e-35 151.4 100 72.0
Nitab4.5_0003063g0010 Nicotiana tabacum HOM05D002352 ORTHO05D003724 4.7e-35 151.4 99 73.7
Nitab4.5_0009488g0020 Nicotiana tabacum HOM05D002352 ORTHO05D003724 4.7e-35 151.4 99 73.7
Medtr1g094165 Medicago truncatula HOM05D002352 ORTHO05D003724 6.1e-35 151.0 100 70.0
Psat6g181080 Pisum sativum HOM05D002352 ORTHO05D003724 6.1e-35 151.0 100 70.0
Atru.chr10.646 Acer truncatum HOM05D002352 ORTHO05D003724 7.9e-35 150.6 98 74.5
BcaB02g09406 Brassica carinata HOM05D002352 ORTHO05D003724 7.9e-35 150.6 101 71.3
BcaC02g11684 Brassica carinata HOM05D002352 ORTHO05D003724 7.9e-35 150.6 101 71.3
A05p10050 Brassica napus HOM05D002352 ORTHO05D003724 7.9e-35 150.6 101 71.3
C04p12410 Brassica napus HOM05D002352 ORTHO05D003724 7.9e-35 150.6 101 71.3
BolC4t22889H Brassica oleracea HOM05D002352 ORTHO05D003724 7.9e-35 150.6 101 71.3
BraA05t19946Z Brassica rapa HOM05D002352 ORTHO05D003724 7.9e-35 150.6 101 71.3
Aa31LG9G15920 Aethionema arabicum HOM05D002352 ORTHO05D003724 1.0e-34 150.2 101 71.3
Cfa000747 Carpinus fangiana HOM05D002352 ORTHO05D003724 1.0e-34 150.2 98 74.5
Eucgr.D00655 Eucalyptus grandis HOM05D002352 ORTHO05D003724 1.0e-34 150.2 98 73.5
SGA_v2.0_scaffold100G29641 Striga asiatica HOM05D002352 ORTHO05D003724 1.0e-34 150.2 99 70.7
arahy.Tifrunner.gnm1.ann1.Q9T26T Arachis hypogaea HOM05D002352 ORTHO05D003724 1.4e-34 149.8 100 70.0
arahy.Tifrunner.gnm1.ann1.XI7UL2 Arachis hypogaea HOM05D002352 ORTHO05D003724 1.4e-34 149.8 100 70.0
Carub.0004s1734 Capsella rubella HOM05D002352 ORTHO05D003724 1.4e-34 149.8 100 72.0
CDE05G2722 Ceratophyllum demersum HOM05D002352 ORTHO05D003724 1.4e-34 149.8 99 72.7
Ca_10540_v3 Cicer arietinum L. HOM05D002352 ORTHO05D003724 1.4e-34 149.8 100 69.0
Glyma.20G183400 Glycine max HOM05D002352 ORTHO05D003724 1.4e-34 149.8 100 71.0
Solyc02g078640.3 Solanum lycopersicum HOM05D002352 ORTHO05D003724 1.4e-34 149.8 99 71.7
Sopen02g023500 Solanum pennellii HOM05D002352 ORTHO05D003724 1.4e-34 149.8 99 71.7
TPR.G10297 Trifolium pratense HOM05D002352 ORTHO05D003724 1.4e-34 149.8 100 69.0
CSS0019100 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D003724 1.8e-34 149.4 99 72.7
CARHR129850 Cardamine hirsuta HOM05D002352 ORTHO05D003724 1.8e-34 149.4 101 70.3
DCAR_004114 Daucus carota HOM05D002352 ORTHO05D003724 1.8e-34 149.4 99 70.7
Sp4g17870 Schrenkiella parvula HOM05D002352 ORTHO05D003724 1.8e-34 149.4 101 70.3
vmacro15889 Vaccinium macrocarpon HOM05D002352 ORTHO05D003724 1.8e-34 149.4 99 71.7
A03p19610 Brassica napus HOM05D002352 ORTHO05D003724 3.9e-34 148.3 101 69.3
C03p22870 Brassica napus HOM05D002352 ORTHO05D003724 3.9e-34 148.3 101 69.3
BolC3t14686H Brassica oleracea HOM05D002352 ORTHO05D003724 3.9e-34 148.3 101 69.3
BraA03t11214Z Brassica rapa HOM05D002352 ORTHO05D003724 3.9e-34 148.3 101 69.3
Migut.M01176 Erythranthe guttata HOM05D002352 ORTHO05D003724 3.9e-34 148.3 99 70.7
Medtr8g023010 Medicago truncatula HOM05D002352 ORTHO05D003724 3.9e-34 148.3 100 69.0
CDE05G3196 Ceratophyllum demersum HOM05D002352 ORTHO05D003724 5.1e-34 147.9 99 72.7
Thhalv10016124m.g Eutrema salsugineum HOM05D002352 ORTHO05D003724 5.1e-34 147.9 100 71.0
Lsat_1_v5_gn_7_19361 Lactuca sativa HOM05D002352 ORTHO05D003724 5.1e-34 147.9 99 67.7
BcaB01g03895 Brassica carinata HOM05D002352 ORTHO05D003724 6.7e-34 147.5 101 68.3
GSVIVG01002244001 Vitis vinifera HOM05D002352 ORTHO05D003724 6.7e-34 147.5 98 74.5
unitig_46.g18629 Utricularia gibba HOM05D002352 ORTHO05D003724 8.8e-34 147.1 105 65.7
Nn012s41459 Nelumbo nucifera HOM05D002352 ORTHO05D003724 1.1e-33 146.7 98 72.4
Nn1g06636 Nelumbo nucifera HOM05D002352 ORTHO05D003724 1.1e-33 146.7 98 72.4
CiPaw.07G217200 Carya illinoinensis HOM05D002352 ORTHO05D003724 1.5e-33 146.4 98 73.5
Lj1C1209G5 Lonicera japonica HOM05D002352 ORTHO05D003724 1.5e-33 146.4 99 68.7
SalBow8G3229 Salvia bowleyana HOM05D002352 ORTHO05D003724 2.6e-33 145.6 99 68.7
AT2G35630 Arabidopsis thaliana HOM05D002352 ORTHO05D003724 3.3e-33 145.2 100 69.0
Aqoxy1G02582 Aquilegia oxysepala HOM05D002352 ORTHO05D003724 5.7e-33 144.4 99 69.7
Cpa.g.sc192.7 Carica papaya HOM05D002352 ORTHO05D003724 5.7e-33 144.4 99 70.7
Haze_05987 Corylus avellana HOM05D002352 ORTHO05D003724 5.7e-33 144.4 102 71.6
SGA_v2.0_scaffold22G09771 Striga asiatica HOM05D002352 ORTHO05D003724 5.7e-33 144.4 99 67.7
THA.LOC104798541 Tarenaya hassleriana HOM05D002352 ORTHO05D003724 5.7e-33 144.4 99 70.7
unitig_37.g12343 Utricularia gibba HOM05D002352 ORTHO05D003724 7.4e-33 144.1 99 66.7
MBI19_g16739_MAGBIO Magnolia biondii HOM05D002352 ORTHO05D003724 1.3e-32 143.3 98 72.4
PSO541G4457 Papaver somniferum HOM05D002352 ORTHO05D003724 2.8e-32 142.1 99 68.7
AL4G31700 Arabidopsis lyrata HOM05D002352 ORTHO05D003724 3.7e-32 141.7 101 66.3
Cc02_g12860 Coffea canephora HOM05D002352 ORTHO05D003724 3.7e-32 141.7 107 64.5
Sc17g0006350 Simmondsia chinensis HOM05D002352 ORTHO05D003724 8.2e-32 140.6 98 67.3
Ah.09g235790 Amaranthus hybridus HOM05D002352 ORTHO05D003724 1.1e-31 140.2 98 68.4
Ah.14g089230 Amaranthus hybridus HOM05D002352 ORTHO05D003724 1.4e-31 139.8 101 68.3
ATR1127G018 Amborella trichopoda HOM05D002352 ORTHO05D003724 1.4e-31 139.8 98 70.4
EL10Ac8g20329 Beta vulgaris HOM05D002352 ORTHO05D003724 4.1e-31 138.3 106 64.2
HanXRQChr04g0123991 Helianthus annuus HOM05D002352 ORTHO05D003724 4.1e-31 138.3 100 68.0
RcHm_v2.0_Chr1g0383361 Rosa chinensis HOM05D002352 ORTHO05D003724 5.3e-31 137.9 100 68.0
Os01g0816400 Oryza sativa ssp. japonica HOM05D002352 ORTHO05D003724 9.1e-31 137.1 99 69.7
FvH4_7g33390 Fragaria vesca HOM05D002352 ORTHO05D003724 2.0e-30 136.0 100 67.0
Zm00001eb149800 Zea mays HOM05D002352 ORTHO05D003724 2.0e-30 136.0 99 67.7
FAN03G0871 Fragaria x ananassa HOM05D002352 ORTHO05D003724 3.5e-30 135.2 100 66.0
Zm00001eb369050 Zea mays HOM05D002352 ORTHO05D003724 3.5e-30 135.2 99 66.7
FAN10G0813 Fragaria x ananassa HOM05D002352 ORTHO05D003724 4.5e-30 134.8 100 66.0
FAN10G3833 Fragaria x ananassa HOM05D002352 ORTHO05D003724 4.5e-30 134.8 100 66.0
Lalb_Chr21g0313501 Lupinus albus HOM05D002352 ORTHO05D003724 4.5e-30 134.8 100 69.0
FAN01G0441 Fragaria x ananassa HOM05D002352 ORTHO05D003724 1.0e-29 133.7 100 64.0
RhsimUnG0043500 Rhododendron simsii HOM05D002352 ORTHO05D003724 1.3e-29 133.3 99 64.6
SEGI_16535 Sequoiadendron giganteum HOM05D002352 ORTHO05D003724 5.0e-29 131.3 99 63.6
SEGI_02636 Sequoiadendron giganteum HOM05D002352 ORTHO05D003724 1.5e-28 129.8 100 62.0
HPP92_018014 Vanilla planifolia HOM05D002352 ORTHO05D003724 1.5e-28 129.8 99 61.6
HPP92_026673 Vanilla planifolia HOM05D002352 ORTHO05D003724 1.5e-28 129.8 99 61.6
CBR_g39205 Chara braunii HOM05D002352 ORTHO05D003724 2.3e-26 122.5 99 57.6
AagrBONN_evm.TU.Sc2ySwM_228.3370 Anthoceros agrestis HOM05D002352 ORTHO05D003724 5.2e-26 121.3 98 61.2
Mapoly0009s0135 Marchantia polymorpha HOM05D002352 ORTHO05D003724 9.7e-25 117.1 98 54.1
SMO230G0112 Selaginella moellendorffii HOM05D002352 ORTHO05D003724 2.2e-24 115.9 99 58.6
Pp3c9_24390 Physcomitrium patens HOM05D002352 ORTHO05D003724 4.1e-23 111.7 99 54.5
Pp3c15_23870 Physcomitrium patens HOM05D002352 ORTHO05D003724 5.9e-22 107.8 99 53.5
Lsat_1_v5_gn_7_48800 Lactuca sativa HOM05D002352 ORTHO05D003724 3.1e-15 85.5 75 49.3
AUR62016965 Chenopodium quinoa HOM05D002352 ORTHO05D003724 2.1e-11 72.8 74 56.8
CSS0010718 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D043285 1.8e-10 69.7 48 64.6
MCO15G118 Micromonas commoda HOM05D002352 ORTHO05D003724 2.0e-09 66.2 103 37.9
SEGI_25616 Sequoiadendron giganteum HOM05D002352 ORTHO05D385709 6.3e-08 61.2 57 50.9
Cre03.g149800 Chlamydomonas reinhardtii HOM05D002352 ORTHO05D003724 3.1e-07 58.9 115 29.6
MBI19_g04166_MAGBIO Magnolia biondii HOM05D002352 ORTHO05D003724 2.7e-06 55.8 54 59.3


User provided reference genes

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