Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI23206 Sapria himalayana HOM05D000329 ORTHO05D005330 3.9e-44 181.0 87 100.0
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 3.4e-16 88.2 76 59.2
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 5.8e-16 87.4 80 61.2
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 9.9e-16 86.7 78 56.4
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.7e-15 85.9 70 62.9
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 2.2e-15 85.5 77 58.4
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 2.2e-15 85.5 75 60.0
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 2.9e-15 85.1 75 60.0
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 2.9e-15 85.1 75 60.0
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 3.8e-15 84.7 75 60.0
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 3.8e-15 84.7 75 60.0
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 3.8e-15 84.7 75 60.0
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 3.8e-15 84.7 75 60.0
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 3.8e-15 84.7 75 60.0
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 3.8e-15 84.7 75 60.0
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 3.8e-15 84.7 75 60.0
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 3.8e-15 84.7 82 54.9
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 4.9e-15 84.3 78 53.8
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 6.4e-15 84.0 75 60.0
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 8.4e-15 83.6 75 60.0
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 1.4e-14 82.8 73 56.2
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 1.4e-14 82.8 75 58.7
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.4e-14 82.8 76 56.6
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.9e-14 82.4 74 58.1
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 2.4e-14 82.0 76 56.6
Haze_04432 Corylus avellana HOM05D000329 ORTHO05D005330 3.2e-14 81.6 79 51.9
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 3.2e-14 81.6 81 54.3
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 5.4e-14 80.9 78 52.6
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 7.1e-14 80.5 75 54.7
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 7.1e-14 80.5 75 54.7
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 7.1e-14 80.5 72 56.9
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 7.1e-14 80.5 73 57.5
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 9.2e-14 80.1 76 53.9
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 9.2e-14 80.1 76 53.9
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 9.2e-14 80.1 75 54.7
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 1.2e-13 79.7 81 50.6
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.2e-13 79.7 81 50.6
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 1.2e-13 79.7 75 57.3
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 1.2e-13 79.7 75 54.7
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 1.6e-13 79.3 75 54.7
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 1.6e-13 79.3 75 54.7
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 2.1e-13 79.0 75 54.7
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.1e-13 79.0 74 56.8
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 2.1e-13 79.0 75 54.7
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 2.7e-13 78.6 83 49.4
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 2.7e-13 78.6 77 53.2
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 3.5e-13 78.2 75 54.7
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 3.5e-13 78.2 81 50.6
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 3.5e-13 78.2 76 52.6
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 6.0e-13 77.4 79 54.4
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 6.0e-13 77.4 72 56.9
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 6.0e-13 77.4 78 56.4
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 7.8e-13 77.0 76 57.9
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 7.8e-13 77.0 77 53.2
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 7.8e-13 77.0 73 56.2
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 7.8e-13 77.0 73 56.2
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 1.0e-12 76.6 71 57.7
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.0e-12 76.6 71 57.7
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 1.0e-12 76.6 74 55.4
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 1.3e-12 76.3 71 57.7
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 1.3e-12 76.3 79 51.9
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.7e-12 75.9 83 48.2
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 1.7e-12 75.9 75 56.0
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 1.7e-12 75.9 75 53.3
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 1.7e-12 75.9 72 54.2
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 2.3e-12 75.5 76 52.6
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.3e-12 75.5 73 53.4
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 2.3e-12 75.5 75 53.3
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 2.3e-12 75.5 75 53.3
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 3.9e-12 74.7 82 50.0
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 3.9e-12 74.7 79 53.2
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.9e-12 74.7 71 56.3
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 5.1e-12 74.3 70 55.7
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 6.6e-12 73.9 80 52.5
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 8.7e-12 73.6 76 50.0
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 1.1e-11 73.2 73 53.4
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 1.5e-11 72.8 83 48.2
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 1.9e-11 72.4 72 51.4
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 1.9e-11 72.4 77 50.6
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 4.3e-11 71.2 77 48.1
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 1.6e-10 69.3 78 50.0
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 1.6e-10 69.3 73 52.1
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 2.1e-10 68.9 78 50.0
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 2.8e-10 68.6 73 49.3
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 6.2e-10 67.4 79 48.1
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.1e-09 66.6 72 43.1
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 1.8e-09 65.9 81 46.9
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 1.8e-09 65.9 77 46.8
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 2.0e-08 62.4 78 42.3
ClCG06G009480 Citrullus lanatus HOM05D000329 ORTHO05D005330 2.6e-08 62.0 77 42.9
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 2.6e-08 62.0 79 40.5
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 2.6e-08 62.0 80 45.0
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 7.6e-08 60.5 77 41.6
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 1.7e-07 59.3 78 46.2
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 2.9e-07 58.5 76 40.8
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.4e-06 56.2 85 37.6
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 2.4e-06 55.5 88 36.4
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 5.4e-06 54.3 87 37.9


User provided reference genes

Program Settings