Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI22607 Sapria himalayana HOM05D000307 ORTHO05D000166 1.5e-118 429.5 210 100.0
SHI00086 Sapria himalayana HOM05D000307 ORTHO05D000166 1.3e-77 293.5 157 92.4
SHI00087 Sapria himalayana HOM05D000307 ORTHO05D000166 2.9e-77 292.4 157 92.4
SHI08685 Sapria himalayana HOM05D000307 ORTHO05D000166 2.6e-62 242.7 154 81.8
SHI00128 Sapria himalayana HOM05D000307 ORTHO05D000166 1.4e-47 193.7 104 94.2
SHI22609 Sapria himalayana HOM05D000307 ORTHO05D000166 4.8e-32 142.1 114 67.5
Thecc.01G119800 Theobroma cacao HOM05D000307 ORTHO05D000166 8.2e-16 88.2 115 37.4
COL.COLO4_22397 Corchorus olitorius HOM05D000307 ORTHO05D000166 1.4e-15 87.4 149 35.6
Duzib147G0158 Durio zibethinus HOM05D000307 ORTHO05D000166 4.1e-15 85.9 113 36.3
TWI34G1561 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 4.5e-14 82.4 115 35.7
Potri.001G214900 Populus trichocarpa HOM05D000307 ORTHO05D000166 7.7e-14 81.6 119 37.8
Gohir.D03G048600 Gossypium hirsutum HOM05D000307 ORTHO05D000166 1.0e-13 81.3 130 33.8
Sabra16G0128300 Salix brachista HOM05D000307 ORTHO05D009271 1.7e-13 80.5 114 39.5
Gorai.003G049800 Gossypium raimondii HOM05D000307 ORTHO05D000166 2.2e-13 80.1 130 33.8
Haze_14188 Corylus avellana HOM05D000307 ORTHO05D000166 6.5e-13 78.6 115 36.5
Cfa007888 Carpinus fangiana HOM05D000307 ORTHO05D000166 1.6e-11 73.9 143 32.9
Manes.03G020700 Manihot esculenta HOM05D000307 ORTHO05D000166 2.7e-11 73.2 151 29.1
Duzib264G0859 Durio zibethinus HOM05D000307 ORTHO05D000166 3.6e-11 72.8 117 33.3
Ciclev10027125m.g Citrus clementina HOM05D000307 ORTHO05D000166 7.9e-11 71.6 145 27.6
Ciclev10030228m.g Citrus clementina HOM05D000307 ORTHO05D000166 1.4e-10 70.9 113 28.3
Cpa.g.sc0.43 Carica papaya HOM05D000307 ORTHO05D000166 1.1e-09 67.8 115 34.8
Atru.chr8.2490 Acer truncatum HOM05D000307 ORTHO05D000166 1.5e-09 67.4 121 30.6
QL09p041547 Quercus lobata HOM05D000307 ORTHO05D000166 1.5e-09 67.4 115 32.2
COL.COLO4_31651 Corchorus olitorius HOM05D028763 ORTHO05D000166 2.0e-09 67.0 111 33.3
TAR624G0600 Trochodendron aralioides HOM05D000307 ORTHO05D000166 3.3e-09 66.2 111 31.5
Dinv15101 Davidia involucrata HOM05D000307 ORTHO05D000166 4.4e-09 65.9 116 33.6
TAR381G0994 Trochodendron aralioides HOM05D000307 ORTHO05D000166 9.7e-09 64.7 113 31.0
CiPaw.04G087000 Carya illinoinensis HOM05D000307 ORTHO05D000166 1.3e-08 64.3 114 33.3
MD17G1250500 Malus domestica HOM05D000307 ORTHO05D000166 3.7e-08 62.8 107 35.5
Gohir.D11G185000 Gossypium hirsutum HOM05D000307 ORTHO05D000166 1.8e-07 60.5 113 30.1
Gorai.007G196600 Gossypium raimondii HOM05D000307 ORTHO05D000166 1.8e-07 60.5 113 30.1
Prupe.2G110900 Prunus persica HOM05D000307 ORTHO05D000166 1.8e-07 60.5 128 32.8
CSS0029060 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 3.1e-07 59.7 113 29.2
Haze_25110 Corylus avellana HOM05D000307 ORTHO05D000166 4.1e-07 59.3 140 31.4
CSS0020770 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 5.3e-07 58.9 113 29.2
Gohir.A11G177200 Gossypium hirsutum HOM05D000307 ORTHO05D000166 5.3e-07 58.9 113 30.1
CiPaw.04G086700 Carya illinoinensis HOM05D000307 ORTHO05D000166 7.0e-07 58.5 146 28.1
Atru.chr4.565 Acer truncatum HOM05D000307 ORTHO05D000166 9.1e-07 58.2 112 28.6
Gohir.A02G137901 Gossypium hirsutum HOM05D000307 ORTHO05D000166 9.1e-07 58.2 108 31.5
QL06p031925 Quercus lobata HOM05D000307 ORTHO05D000166 9.1e-07 58.2 117 35.0
SHI00129 Sapria himalayana HOM05D000307 ORTHO05D000166 9.1e-07 58.2 27 92.6
CSS0047056 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.2e-06 57.8 113 30.1
Cfa002815 Carpinus fangiana HOM05D000307 ORTHO05D000166 1.2e-06 57.8 140 32.1
CSS0000924 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 1.5e-06 57.4 141 26.2
CSS0036324 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 2.0e-06 57.0 112 28.6
Oeu023403.1 Olea europaea HOM05D000307 ORTHO05D000166 3.5e-06 56.2 112 31.2
CSS0022233 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 4.5e-06 55.8 112 27.7
COL.COLO4_31652 Corchorus olitorius HOM05D028763 ORTHO05D000166 4.5e-06 55.8 103 30.1
Potri.002G255700 Populus trichocarpa HOM05D000307 ORTHO05D000166 4.5e-06 55.8 110 30.9
TAR625G0700 Trochodendron aralioides HOM05D000307 ORTHO05D000166 5.9e-06 55.5 119 28.6


User provided reference genes

Program Settings