Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI22582 Sapria himalayana HOM05D004065 ORTHO05D004806 9.0e-87 323.6 163 100.0
Potri.008G052700 Populus trichocarpa HOM05D004065 ORTHO05D004806 3.3e-12 75.9 83 48.2
Potri.010G207900 Populus trichocarpa HOM05D004065 ORTHO05D004806 4.3e-12 75.5 83 49.4
Sabra10G0160500 Salix brachista HOM05D004065 ORTHO05D004806 5.6e-12 75.1 84 48.8
Eucgr.G02920 Eucalyptus grandis HOM05D004065 ORTHO05D004806 9.5e-12 74.3 93 46.2
Manes.10G033000 Manihot esculenta HOM05D004065 ORTHO05D004806 2.1e-11 73.2 83 49.4
COL.COLO4_14967 Corchorus olitorius HOM05D004065 ORTHO05D004806 2.8e-11 72.8 83 48.2
Duzib106G1820 Durio zibethinus HOM05D004065 ORTHO05D004806 2.8e-11 72.8 72 54.2
Duzib114G0580 Durio zibethinus HOM05D004065 ORTHO05D004806 2.8e-11 72.8 72 54.2
Gohir.A10G215800 Gossypium hirsutum HOM05D004065 ORTHO05D004806 2.8e-11 72.8 81 49.4
Gohir.D10G224800 Gossypium hirsutum HOM05D004065 ORTHO05D004806 2.8e-11 72.8 81 49.4
Gorai.011G255800 Gossypium raimondii HOM05D004065 ORTHO05D004806 2.8e-11 72.8 81 49.4
Gohir.A05G350100 Gossypium hirsutum HOM05D004065 ORTHO05D004806 3.6e-11 72.4 69 56.5
Gohir.D04G062400 Gossypium hirsutum HOM05D004065 ORTHO05D004806 3.6e-11 72.4 69 56.5
Gorai.012G069700 Gossypium raimondii HOM05D004065 ORTHO05D004806 3.6e-11 72.4 69 56.5
Thecc.10G046900 Theobroma cacao HOM05D004065 ORTHO05D004806 3.6e-11 72.4 72 54.2
Nn8g40630 Nelumbo nucifera HOM05D004065 ORTHO05D004806 6.2e-11 71.6 79 49.4
Ciclev10030542m.g Citrus clementina HOM05D004065 ORTHO05D004806 8.0e-11 71.2 83 45.8
MD01G1124000 Malus domestica HOM05D004065 ORTHO05D004806 1.4e-10 70.5 74 51.4
Solyc06g042960.3 Solanum lycopersicum HOM05D004065 ORTHO05D004806 1.4e-10 70.5 78 51.3
Sopen06g010560 Solanum pennellii HOM05D004065 ORTHO05D004806 1.4e-10 70.5 78 51.3
THA.LOC104799352 Tarenaya hassleriana HOM05D004065 ORTHO05D004806 1.4e-10 70.5 72 52.8
Peaxi162Scf00658g00725 Petunia axillaris HOM05D004065 ORTHO05D004806 2.3e-10 69.7 78 50.0
TWI38G1478 Tripterygium wilfordii HOM05D004065 ORTHO05D004806 2.3e-10 69.7 72 51.4
Actinidia13867 Actinidia chinensis HOM05D004065 ORTHO05D004806 3.1e-10 69.3 74 51.4
Cpa.g.sc1.377 Carica papaya HOM05D004065 ORTHO05D004806 3.1e-10 69.3 73 50.7
MD07G1194200 Malus domestica HOM05D004065 ORTHO05D004806 3.1e-10 69.3 74 51.4
QL08p059051 Quercus lobata HOM05D004065 ORTHO05D004806 3.1e-10 69.3 73 50.7
Dinv25990 Davidia involucrata HOM05D004065 ORTHO05D004806 4.0e-10 68.9 72 50.0
Nn2g10418 Nelumbo nucifera HOM05D004065 ORTHO05D004806 4.0e-10 68.9 78 48.7
Nitab4.5_0001836g0030 Nicotiana tabacum HOM05D004065 ORTHO05D004806 4.0e-10 68.9 78 50.0
Nitab4.5_0005137g0010 Nicotiana tabacum HOM05D004065 ORTHO05D004806 4.0e-10 68.9 78 50.0
PGR142G1305 Punica granatum HOM05D004065 ORTHO05D004806 4.0e-10 68.9 78 47.4
CiPaw.02G182500 Carya illinoinensis HOM05D004065 ORTHO05D004806 5.2e-10 68.6 72 48.6
Oeu016023.5 Olea europaea HOM05D004065 ORTHO05D004806 5.2e-10 68.6 73 53.4
SalBow6G0580 Salvia bowleyana HOM05D004065 ORTHO05D004806 8.9e-10 67.8 112 40.2
Haze_17038 Corylus avellana HOM05D004065 ORTHO05D004806 1.2e-09 67.4 85 44.7
Dinv31435 Davidia involucrata HOM05D004065 ORTHO05D004806 1.2e-09 67.4 72 50.0
Prupe.2G231600 Prunus persica HOM05D004065 ORTHO05D004806 1.2e-09 67.4 83 49.4
BNapus_Darmor_BZH_scaffold_149p00120 Brassica napus HOM05D004065 ORTHO05D004806 1.5e-09 67.0 83 42.2
BraA01t04124Z Brassica rapa HOM05D004065 ORTHO05D004806 1.5e-09 67.0 83 42.2
Lj8C86G13 Lonicera japonica HOM05D004065 ORTHO05D004806 1.5e-09 67.0 73 49.3
AL3G24260 Arabidopsis lyrata HOM05D004065 ORTHO05D004806 2.0e-09 66.6 83 43.4
Lsat_1_v5_gn_2_117761 Lactuca sativa HOM05D004065 ORTHO05D004806 2.0e-09 66.6 72 48.6
Lj1g0007112 Lotus japonicus HOM05D004065 ORTHO05D004806 2.0e-09 66.6 72 51.4
RcHm_v2.0_Chr1g0366301 Rosa chinensis HOM05D004065 ORTHO05D004806 2.0e-09 66.6 72 51.4
AT3G12590 Arabidopsis thaliana HOM05D004065 ORTHO05D004806 2.6e-09 66.2 83 42.2
BcaB04g21053 Brassica carinata HOM05D004065 ORTHO05D004806 2.6e-09 66.2 83 42.2
C01p52580 Brassica napus HOM05D004065 ORTHO05D004806 2.6e-09 66.2 83 42.2
Carub.0003s1194 Capsella rubella HOM05D004065 ORTHO05D004806 2.6e-09 66.2 83 42.2
Thhalv10019927m.g Eutrema salsugineum HOM05D004065 ORTHO05D004806 2.6e-09 66.2 83 42.2
Rhsim09G0164300 Rhododendron simsii HOM05D004065 ORTHO05D004806 3.4e-09 65.9 75 49.3
HanXRQChr07g0201231 Helianthus annuus HOM05D004065 ORTHO05D004806 4.4e-09 65.5 72 50.0
LjContig00357g0027530 Lotus japonicus HOM05D004065 ORTHO05D004806 4.4e-09 65.5 72 48.6
Medtr7g024190 Medicago truncatula HOM05D004065 ORTHO05D004806 4.4e-09 65.5 77 48.1
Aa31LG3G60 Aethionema arabicum HOM05D004065 ORTHO05D004806 5.8e-09 65.1 72 47.2
BcaB04g21060 Brassica carinata HOM05D004065 ORTHO05D004806 5.8e-09 65.1 83 42.2
BolC1t05197H Brassica oleracea HOM05D004065 ORTHO05D004806 5.8e-09 65.1 83 42.2
CiPaw.01G284400 Carya illinoinensis HOM05D004065 ORTHO05D004806 5.8e-09 65.1 72 47.2
ECA238G1619 Erigeron canadensis HOM05D004065 ORTHO05D004806 5.8e-09 65.1 72 47.2
BcaC01g04018 Brassica carinata HOM05D004065 ORTHO05D004806 7.5e-09 64.7 83 41.0
C03p45740 Brassica napus HOM05D000062 ORTHO05D004806 7.5e-09 64.7 83 41.0
BraA03t12924Z Brassica rapa HOM05D004065 ORTHO05D004806 7.5e-09 64.7 72 47.2
CARHR087100 Cardamine hirsuta HOM05D004065 ORTHO05D004806 7.5e-09 64.7 83 41.0
Cfa001505 Carpinus fangiana HOM05D004065 ORTHO05D004806 7.5e-09 64.7 72 48.6
Atru.chr12.508 Acer truncatum HOM05D004065 ORTHO05D004806 9.8e-09 64.3 72 47.2
A03p37690 Brassica napus HOM05D000062 ORTHO05D004806 9.8e-09 64.3 83 39.8
CANSAT56G4002 Cannabis sativa HOM05D004065 ORTHO05D004806 9.8e-09 64.3 127 37.0
DCAR_019167 Daucus carota HOM05D004065 ORTHO05D004806 9.8e-09 64.3 84 42.9
Migut.F01518 Erythranthe guttata HOM05D004065 ORTHO05D004806 1.3e-08 63.9 73 46.6
FvH4_7g21970 Fragaria vesca HOM05D004065 ORTHO05D004806 1.3e-08 63.9 72 48.6
FAN01G1867 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.3e-08 63.9 72 48.6
FAN03G1397 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.3e-08 63.9 72 48.6
FAN06G3343 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.3e-08 63.9 72 48.6
FAN06G3757 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.3e-08 63.9 72 48.6
FAN10G0299 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.3e-08 63.9 72 48.6
Hma1.2p1_0067F.1_g037070 Hydrangea macrophylla HOM05D004065 ORTHO05D004806 1.3e-08 63.9 81 44.4
Lalb_Chr06g0164301 Lupinus albus HOM05D004065 ORTHO05D004806 1.3e-08 63.9 72 47.2
CSS0036524 Camellia sinensis var. sinensis HOM05D004065 ORTHO05D004806 1.7e-08 63.5 72 50.0
Hma1.2p1_1137F.1_g260730 Hydrangea macrophylla HOM05D004065 ORTHO05D004806 2.2e-08 63.2 81 44.4
Psat6g236080 Pisum sativum HOM05D004065 ORTHO05D004806 2.2e-08 63.2 73 45.2
Glyma.10G289700 Glycine max HOM05D004065 ORTHO05D004806 2.9e-08 62.8 93 40.9
Glyma.20G099500 Glycine max HOM05D004065 ORTHO05D004806 2.9e-08 62.8 93 40.9
Lalb_Chr04g0257821 Lupinus albus HOM05D004065 ORTHO05D004806 2.9e-08 62.8 83 44.6
BolC3t16849H Brassica oleracea HOM05D004065 ORTHO05D004806 3.7e-08 62.4 83 41.0
Psat3g180760 Pisum sativum HOM05D004065 ORTHO05D004806 3.7e-08 62.4 74 48.6
Sp3g10730 Schrenkiella parvula HOM05D004065 ORTHO05D004806 3.7e-08 62.4 83 41.0
Glyma.02G093600 Glycine max HOM05D004065 ORTHO05D004806 4.9e-08 62.0 83 44.6
Glyma.18G288500 Glycine max HOM05D004065 ORTHO05D004806 4.9e-08 62.0 83 44.6
Hma1.2p1_0727F.1_g209200 Hydrangea macrophylla HOM05D004065 ORTHO05D004806 6.4e-08 61.6 80 43.8
TWI15G0503 Tripterygium wilfordii HOM05D004065 ORTHO05D004806 8.3e-08 61.2 72 45.8
MSTRG.8235 Avicennia marina HOM05D004065 ORTHO05D004806 1.1e-07 60.8 73 43.8
Cc02_g08160 Coffea canephora HOM05D004065 ORTHO05D004806 1.1e-07 60.8 72 45.8
SGA_v2.0_scaffold2G00996 Striga asiatica HOM05D004065 ORTHO05D004806 1.1e-07 60.8 72 45.8
arahy.Tifrunner.gnm1.ann1.P8VZLW Arachis hypogaea HOM05D004065 ORTHO05D004806 1.4e-07 60.5 72 47.2
arahy.Tifrunner.gnm1.ann1.XU51RJ Arachis hypogaea HOM05D004065 ORTHO05D004806 1.4e-07 60.5 72 47.2
ClCG07G003370 Citrullus lanatus HOM05D004065 ORTHO05D004806 1.9e-07 60.1 72 45.8
MELO3C023859.2 Cucumis melo HOM05D004065 ORTHO05D004806 1.9e-07 60.1 72 45.8
CsaV3_5G008100 Cucumis sativus L. HOM05D004065 ORTHO05D004806 1.9e-07 60.1 72 45.8
Phvul.008G013500 Phaseolus vulgaris HOM05D004065 ORTHO05D004806 1.9e-07 60.1 74 48.6
Sed0019555 Sechium edule HOM05D004065 ORTHO05D004806 1.9e-07 60.1 72 45.8
TAR633G2080 Trochodendron aralioides HOM05D004065 ORTHO05D004806 1.9e-07 60.1 83 44.6
TPR.G15495 Trifolium pratense HOM05D004065 ORTHO05D004806 2.4e-07 59.7 77 45.5
EL10Ac2g03418 Beta vulgaris HOM05D004065 ORTHO05D004806 3.2e-07 59.3 90 42.2
Aqoxy2G02042 Aquilegia oxysepala HOM05D004065 ORTHO05D004806 5.4e-07 58.5 93 37.6
GSVIVG01016585001 Vitis vinifera HOM05D004065 ORTHO05D004806 5.4e-07 58.5 74 44.6
Ca_07234_v3 Cicer arietinum L. HOM05D004065 ORTHO05D004806 9.2e-07 57.8 79 45.6
AUR62038371 Chenopodium quinoa HOM05D004065 ORTHO05D004806 1.6e-06 57.0 76 43.4
Sc20g0002620 Simmondsia chinensis HOM05D004065 ORTHO05D004806 2.1e-06 56.6 74 41.9
Ah.16g107250 Amaranthus hybridus HOM05D004065 ORTHO05D004806 2.7e-06 56.2 71 46.5


User provided reference genes

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