Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI22580 Sapria himalayana HOM05D004065 ORTHO05D004806 1.3e-67 259.6 134 100.0
Cpa.g.sc1.377 Carica papaya HOM05D004065 ORTHO05D004806 1.3e-14 83.6 132 48.5
Sabra10G0160500 Salix brachista HOM05D004065 ORTHO05D004806 4.9e-14 81.6 132 46.2
Manes.10G033000 Manihot esculenta HOM05D004065 ORTHO05D004806 2.4e-13 79.3 134 42.5
Potri.010G207900 Populus trichocarpa HOM05D004065 ORTHO05D004806 4.1e-13 78.6 132 43.9
Aqoxy2G02042 Aquilegia oxysepala HOM05D004065 ORTHO05D004806 1.2e-12 77.0 132 44.7
ClCG07G003370 Citrullus lanatus HOM05D004065 ORTHO05D004806 2.1e-12 76.3 146 43.8
Haze_17038 Corylus avellana HOM05D004065 ORTHO05D004806 2.1e-12 76.3 133 47.4
Cfa001505 Carpinus fangiana HOM05D004065 ORTHO05D004806 3.5e-12 75.5 132 47.0
MELO3C023859.2 Cucumis melo HOM05D004065 ORTHO05D004806 7.8e-12 74.3 145 43.4
CsaV3_5G008100 Cucumis sativus L. HOM05D004065 ORTHO05D004806 7.8e-12 74.3 145 43.4
Atru.chr12.508 Acer truncatum HOM05D004065 ORTHO05D004806 1.0e-11 73.9 136 41.9
arahy.Tifrunner.gnm1.ann1.P8VZLW Arachis hypogaea HOM05D004065 ORTHO05D004806 1.3e-11 73.6 108 47.2
arahy.Tifrunner.gnm1.ann1.XU51RJ Arachis hypogaea HOM05D004065 ORTHO05D004806 1.3e-11 73.6 108 47.2
Thecc.10G046900 Theobroma cacao HOM05D004065 ORTHO05D004806 1.3e-11 73.6 132 43.9
TWI38G1478 Tripterygium wilfordii HOM05D004065 ORTHO05D004806 1.3e-11 73.6 132 43.9
TWI15G0503 Tripterygium wilfordii HOM05D004065 ORTHO05D004806 2.3e-11 72.8 133 42.9
Ciclev10030542m.g Citrus clementina HOM05D004065 ORTHO05D004806 3.9e-11 72.0 108 44.4
Dinv25990 Davidia involucrata HOM05D004065 ORTHO05D004806 5.1e-11 71.6 142 43.0
THA.LOC104799352 Tarenaya hassleriana HOM05D004065 ORTHO05D004806 5.1e-11 71.6 131 42.7
QL08p059051 Quercus lobata HOM05D004065 ORTHO05D004806 8.6e-11 70.9 132 43.2
CiPaw.01G284400 Carya illinoinensis HOM05D004065 ORTHO05D004806 1.5e-10 70.1 132 43.2
Thhalv10019927m.g Eutrema salsugineum HOM05D004065 ORTHO05D004806 1.5e-10 70.1 132 42.4
Potri.008G052700 Populus trichocarpa HOM05D004065 ORTHO05D004806 1.5e-10 70.1 132 41.7
MSTRG.8235 Avicennia marina HOM05D004065 ORTHO05D004806 2.5e-10 69.3 123 43.1
BcaB04g21060 Brassica carinata HOM05D004065 ORTHO05D004806 2.5e-10 69.3 132 40.2
BolC1t05197H Brassica oleracea HOM05D004065 ORTHO05D004806 2.5e-10 69.3 132 40.2
TAR633G2080 Trochodendron aralioides HOM05D004065 ORTHO05D004806 3.3e-10 68.9 132 43.9
ECA238G1619 Erigeron canadensis HOM05D004065 ORTHO05D004806 4.3e-10 68.6 143 40.6
HanXRQChr07g0201231 Helianthus annuus HOM05D004065 ORTHO05D004806 4.3e-10 68.6 143 40.6
BcaB04g21053 Brassica carinata HOM05D004065 ORTHO05D004806 5.6e-10 68.2 132 39.4
BNapus_Darmor_BZH_scaffold_149p00120 Brassica napus HOM05D004065 ORTHO05D004806 5.6e-10 68.2 132 39.4
C01p52580 Brassica napus HOM05D004065 ORTHO05D004806 5.6e-10 68.2 132 39.4
BraA01t04124Z Brassica rapa HOM05D004065 ORTHO05D004806 5.6e-10 68.2 132 39.4
Hma1.2p1_0727F.1_g209200 Hydrangea macrophylla HOM05D004065 ORTHO05D004806 7.3e-10 67.8 132 43.2
Lsat_1_v5_gn_2_117761 Lactuca sativa HOM05D004065 ORTHO05D004806 7.3e-10 67.8 143 39.9
GSVIVG01016585001 Vitis vinifera HOM05D004065 ORTHO05D004806 7.3e-10 67.8 143 40.6
COL.COLO4_14967 Corchorus olitorius HOM05D004065 ORTHO05D004806 9.6e-10 67.4 132 41.7
Actinidia13867 Actinidia chinensis HOM05D004065 ORTHO05D004806 1.2e-09 67.0 132 41.7
Cc02_g08160 Coffea canephora HOM05D004065 ORTHO05D004806 1.2e-09 67.0 132 40.9
Glyma.18G288500 Glycine max HOM05D004065 ORTHO05D004806 1.6e-09 66.6 127 39.4
CSS0036524 Camellia sinensis var. sinensis HOM05D004065 ORTHO05D004806 2.1e-09 66.2 125 42.4
Duzib106G1820 Durio zibethinus HOM05D004065 ORTHO05D004806 2.1e-09 66.2 133 39.8
Sed0019555 Sechium edule HOM05D004065 ORTHO05D004806 2.1e-09 66.2 147 41.5
Aa31LG3G60 Aethionema arabicum HOM05D004065 ORTHO05D004806 2.8e-09 65.9 132 39.4
DCAR_019167 Daucus carota HOM05D004065 ORTHO05D004806 2.8e-09 65.9 132 41.7
FvH4_7g21970 Fragaria vesca HOM05D004065 ORTHO05D004806 2.8e-09 65.9 134 41.8
FAN06G3757 Fragaria x ananassa HOM05D004065 ORTHO05D004806 2.8e-09 65.9 134 41.8
Gohir.A05G350100 Gossypium hirsutum HOM05D004065 ORTHO05D004806 2.8e-09 65.9 121 43.8
Gohir.A10G215800 Gossypium hirsutum HOM05D004065 ORTHO05D004806 3.6e-09 65.5 132 42.4
Nn2g10418 Nelumbo nucifera HOM05D004065 ORTHO05D004806 3.6e-09 65.5 132 40.2
SGA_v2.0_scaffold2G00996 Striga asiatica HOM05D004065 ORTHO05D004806 3.6e-09 65.5 134 41.0
Dinv31435 Davidia involucrata HOM05D004065 ORTHO05D004806 4.7e-09 65.1 142 40.8
Duzib114G0580 Durio zibethinus HOM05D004065 ORTHO05D004806 4.7e-09 65.1 132 40.9
Lalb_Chr06g0164301 Lupinus albus HOM05D004065 ORTHO05D004806 4.7e-09 65.1 134 39.6
Rhsim09G0164300 Rhododendron simsii HOM05D004065 ORTHO05D004806 4.7e-09 65.1 156 37.8
Gorai.011G255800 Gossypium raimondii HOM05D004065 ORTHO05D004806 6.2e-09 64.7 132 41.7
Ca_07234_v3 Cicer arietinum L. HOM05D004065 ORTHO05D004806 8.1e-09 64.3 106 42.5
CANSAT56G4002 Cannabis sativa HOM05D004065 ORTHO05D004806 1.1e-08 63.9 135 38.5
Eucgr.G02920 Eucalyptus grandis HOM05D004065 ORTHO05D004806 1.1e-08 63.9 149 38.3
FAN01G1867 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.1e-08 63.9 134 41.0
FAN10G0299 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.1e-08 63.9 132 38.6
Nitab4.5_0005137g0030 Nicotiana tabacum HOM05D004065 ORTHO05D004806 1.1e-08 63.9 143 40.6
Peaxi162Scf00658g00733 Petunia axillaris HOM05D004065 ORTHO05D004806 1.1e-08 63.9 118 39.0
Glyma.02G093600 Glycine max HOM05D004065 ORTHO05D004806 1.4e-08 63.5 108 41.7
Medtr7g024190 Medicago truncatula HOM05D004065 ORTHO05D004806 1.4e-08 63.5 111 41.4
Lalb_Chr04g0257821 Lupinus albus HOM05D004065 ORTHO05D004806 1.8e-08 63.2 107 43.0
Nitab4.5_0001836g0020 Nicotiana tabacum HOM05D004065 ORTHO05D004806 1.8e-08 63.2 133 39.8
SalBow6G0580 Salvia bowleyana HOM05D004065 ORTHO05D004806 1.8e-08 63.2 134 39.6
CARHR087100 Cardamine hirsuta HOM05D004065 ORTHO05D004806 2.4e-08 62.8 146 38.4
DCAR_015196 Daucus carota HOM05D004065 ORTHO05D004806 2.4e-08 62.8 128 39.1
Glyma.10G289700 Glycine max HOM05D004065 ORTHO05D004806 2.4e-08 62.8 129 40.3
Gohir.D04G062400 Gossypium hirsutum HOM05D004065 ORTHO05D004806 2.4e-08 62.8 132 41.7
Gorai.012G069700 Gossypium raimondii HOM05D004065 ORTHO05D004806 2.4e-08 62.8 132 41.7
Phvul.008G013500 Phaseolus vulgaris HOM05D004065 ORTHO05D004806 4.0e-08 62.0 134 38.1
AL3G24260 Arabidopsis lyrata HOM05D004065 ORTHO05D004806 5.2e-08 61.6 132 38.6
FAN06G3343 Fragaria x ananassa HOM05D004065 ORTHO05D004806 5.2e-08 61.6 134 40.3
Gohir.D10G224800 Gossypium hirsutum HOM05D004065 ORTHO05D004806 5.2e-08 61.6 132 42.4
Psat3g180760 Pisum sativum HOM05D004065 ORTHO05D004806 5.2e-08 61.6 106 43.4
Ah.16g107250 Amaranthus hybridus HOM05D004065 ORTHO05D004806 6.8e-08 61.2 143 38.5
Migut.F01518 Erythranthe guttata HOM05D004065 ORTHO05D004806 6.8e-08 61.2 134 41.0
Lj1g0007112 Lotus japonicus HOM05D004065 ORTHO05D004806 8.9e-08 60.8 106 42.5
AT3G12590 Arabidopsis thaliana HOM05D004065 ORTHO05D004806 1.5e-07 60.1 132 37.9
Carub.0003s1194 Capsella rubella HOM05D004065 ORTHO05D004806 2.0e-07 59.7 121 37.2
Psat6g236080 Pisum sativum HOM05D004065 ORTHO05D004806 2.6e-07 59.3 124 40.3
EL10Ac2g03418 Beta vulgaris HOM05D004065 ORTHO05D004806 4.4e-07 58.5 112 36.6
Glyma.20G099500 Glycine max HOM05D004065 ORTHO05D004806 4.4e-07 58.5 129 39.5
BraA03t12924Z Brassica rapa HOM05D004065 ORTHO05D004806 5.8e-07 58.2 136 36.8
LjContig00357g0027530 Lotus japonicus HOM05D004065 ORTHO05D004806 5.8e-07 58.2 107 41.1
A03p37690 Brassica napus HOM05D000062 ORTHO05D004806 4.9e-06 55.1 136 36.0


User provided reference genes

Program Settings