Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21981 Sapria himalayana HOM05D002876 ORTHO05D009654 1.6e-143 512.7 248 100.0
SHI45281 Sapria himalayana HOM05D000176 ORTHO05D000106 1.1e-19 101.3 145 44.8
SHI46056 Sapria himalayana HOM05D002876 ORTHO05D000106 4.8e-15 85.9 57 73.7
SHI46131 Sapria himalayana HOM05D002876 ORTHO05D000106 4.8e-15 85.9 57 73.7
SHI47274 Sapria himalayana HOM05D002876 ORTHO05D000106 2.4e-14 83.6 55 72.7
SHI35392 Sapria himalayana HOM05D002876 ORTHO05D000106 6.9e-14 82.0 54 75.9
SHI06307 Sapria himalayana HOM05D002876 ORTHO05D000106 9.1e-14 81.6 160 36.2
SHI36810 Sapria himalayana HOM05D000624 ORTHO05D002255 2.0e-13 80.5 55 70.9
SHI37668 Sapria himalayana HOM05D002876 ORTHO05D000106 4.5e-13 79.3 157 35.0
SHI28069 Sapria himalayana HOM05D002876 ORTHO05D000106 2.9e-12 76.6 123 41.5
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 5.5e-11 72.4 47 63.8
SHI22148 Sapria himalayana HOM05D000176 ORTHO05D000106 5.5e-11 72.4 40 77.5
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.6e-10 70.9 47 63.8
QL02p103239 Quercus lobata HOM05D000176 ORTHO05D000106 4.7e-10 69.3 47 59.6
SHI34848 Sapria himalayana HOM05D002876 ORTHO05D366497 6.1e-10 68.9 127 40.9
AL1G54690 Arabidopsis lyrata HOM05D000176 ORTHO05D003511 1.8e-09 67.4 42 61.9
AT1G48120 Arabidopsis thaliana HOM05D000176 ORTHO05D003511 1.8e-09 67.4 42 61.9
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 1.8e-09 67.4 47 61.7
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 2.3e-09 67.0 47 61.7
Carub.0001s3722 Capsella rubella HOM05D000176 ORTHO05D003511 3.9e-09 66.2 42 59.5
Thhalv10011184m.g Eutrema salsugineum HOM05D000176 ORTHO05D003511 3.9e-09 66.2 42 59.5
Sp1g35090 Schrenkiella parvula HOM05D000176 ORTHO05D003511 3.9e-09 66.2 42 57.1
A06p04680 Brassica napus HOM05D000176 ORTHO05D003511 5.1e-09 65.9 42 57.1
C06p02530 Brassica napus HOM05D000176 ORTHO05D003511 5.1e-09 65.9 42 57.1
BolC6t35381H Brassica oleracea HOM05D000176 ORTHO05D003511 5.1e-09 65.9 42 57.1
BraA06t23671Z Brassica rapa HOM05D000176 ORTHO05D003511 5.1e-09 65.9 42 57.1
SHI32789 Sapria himalayana HOM05D002876 ORTHO05D000106 5.1e-09 65.9 43 65.1
Aa31LG10G5620 Aethionema arabicum HOM05D000176 ORTHO05D003511 1.5e-08 64.3 42 59.5
CARHR037760 Cardamine hirsuta HOM05D000176 ORTHO05D003511 1.5e-08 64.3 42 59.5
SHI07655 Sapria himalayana HOM05D002876 ORTHO05D007253 1.5e-08 64.3 41 73.2
SHI50194 Sapria himalayana HOM05D002876 ORTHO05D007253 1.5e-08 64.3 42 66.7
THA.LOC104802612 Tarenaya hassleriana HOM05D000176 ORTHO05D003511 3.3e-08 63.2 42 59.5
SHI22888 Sapria himalayana HOM05D002876 ORTHO05D007253 4.4e-08 62.8 36 69.4
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 5.7e-08 62.4 42 57.1
MELO3C033541.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.3e-07 61.2 47 53.2
SHI18678 Sapria himalayana HOM05D002876 ORTHO05D000106 1.3e-07 61.2 35 74.3
CsaV3_5G039840 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.2e-07 60.5 47 53.2
Cc05_g12610 Coffea canephora HOM05D000176 ORTHO05D000106 6.3e-07 58.9 42 59.5
CSS0024646 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.2e-07 58.5 40 57.5
Rhsim03G0028500 Rhododendron simsii HOM05D000176 ORTHO05D000106 8.2e-07 58.5 45 53.3
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-06 58.2 40 57.5
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-06 58.2 40 57.5
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-06 58.2 40 57.5
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-06 58.2 40 57.5
ClCG01G008600 Citrullus lanatus HOM05D000176 ORTHO05D000106 1.1e-06 58.2 42 59.5
SHI24795 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-06 58.2 77 44.2
CSS0010546 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.4e-06 57.8 40 57.5
CSS0018283 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.8e-06 57.4 40 57.5
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 57.0 40 55.0
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 57.0 67 40.3
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 57.0 40 55.0
CSS0036437 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 57.0 67 40.3
CSS0038560 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 57.0 40 55.0
CSS0048918 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 57.0 40 55.0
CSS0049971 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 57.0 67 40.3
Cc03_g15950 Coffea canephora HOM05D000176 ORTHO05D003511 2.4e-06 57.0 42 57.1
Migut.M01636 Erythranthe guttata HOM05D000176 ORTHO05D000106 2.4e-06 57.0 42 52.4
CSS0042023 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.1e-06 56.6 40 55.0
MELO3C032988.2 Cucumis melo HOM05D000176 ORTHO05D009654 3.1e-06 56.6 42 52.4
MELO3C001396.2 Cucumis melo HOM05D000176 ORTHO05D009654 4.1e-06 56.2 42 54.8
MELO3C027926.2 Cucumis melo HOM05D007519 ORTHO05D009654 4.1e-06 56.2 41 58.5
MELO3C034271.2 Cucumis melo HOM05D000176 ORTHO05D009654 4.1e-06 56.2 42 54.8
SHI43954 Sapria himalayana HOM05D002876 ORTHO05D000106 4.1e-06 56.2 86 44.2
MELO3C030021.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.3e-06 55.8 42 54.8
CSS0009485 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.1e-06 55.1 40 55.0
Oeu017988.1 Olea europaea HOM05D000176 ORTHO05D000106 9.1e-06 55.1 42 52.4
SHI40807 Sapria himalayana HOM05D002876 ORTHO05D000106 9.1e-06 55.1 36 58.3


User provided reference genes

Program Settings