Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21663 Sapria himalayana HOM05D004340 ORTHO05D014919 3.4e-103 378.3 181 100.0
Prupe.1G035400 Prunus persica HOM05D004340 ORTHO05D006363 8.3e-17 91.3 77 54.5
QL03p068099 Quercus lobata HOM05D004340 ORTHO05D006363 1.9e-16 90.1 73 56.2
Lalb_Chr05g0220261 Lupinus albus HOM05D004340 ORTHO05D014919 9.2e-16 87.8 79 50.6
MD16G1069200 Malus domestica HOM05D004340 ORTHO05D006363 1.2e-15 87.4 77 51.9
Duzib251G0421 Durio zibethinus HOM05D004340 ORTHO05D006363 1.6e-15 87.0 77 49.4
Ciclev10030675m.g Citrus clementina HOM05D004340 ORTHO05D006363 2.7e-15 86.3 77 49.4
CANSAT64G1884 Cannabis sativa HOM05D004340 ORTHO05D006363 3.5e-15 85.9 77 48.1
Manes.01G034000 Manihot esculenta HOM05D004340 ORTHO05D006363 3.5e-15 85.9 77 54.5
Gorai.013G087900 Gossypium raimondii HOM05D004340 ORTHO05D006363 4.6e-15 85.5 75 50.7
Cpa.g.sc1.51 Carica papaya HOM05D004340 ORTHO05D014919 6.0e-15 85.1 77 50.6
arahy.Tifrunner.gnm1.ann1.MXBT1J Arachis hypogaea HOM05D004340 ORTHO05D006363 1.3e-14 84.0 73 50.7
Haze_11982 Corylus avellana HOM05D004340 ORTHO05D006363 1.3e-14 84.0 75 53.3
Cfa008953 Carpinus fangiana HOM05D004340 ORTHO05D006363 2.3e-14 83.2 77 51.9
Gohir.D13G076900 Gossypium hirsutum HOM05D004340 ORTHO05D006363 2.3e-14 83.2 75 50.7
Dinv16674 Davidia involucrata HOM05D004340 ORTHO05D006363 3.0e-14 82.8 75 52.0
Gohir.A13G077700 Gossypium hirsutum HOM05D004340 ORTHO05D006363 3.0e-14 82.8 75 50.7
Medtr4g082265 Medicago truncatula HOM05D004340 ORTHO05D006363 3.0e-14 82.8 77 50.6
RcHm_v2.0_Chr4g0439421 Rosa chinensis HOM05D004340 ORTHO05D006363 8.6e-14 81.3 77 49.4
TPR.G34046 Trifolium pratense HOM05D004340 ORTHO05D006363 8.6e-14 81.3 77 48.1
Aa31LG10G13720 Aethionema arabicum HOM05D004340 ORTHO05D006363 1.1e-13 80.9 79 46.8
Thhalv10027638m.g Eutrema salsugineum HOM05D004340 ORTHO05D006363 1.1e-13 80.9 74 50.0
Medtr4g082150 Medicago truncatula HOM05D004340 ORTHO05D006363 1.1e-13 80.9 77 49.4
AUR62005824 Chenopodium quinoa HOM05D004340 ORTHO05D006363 1.5e-13 80.5 72 54.2
AUR62032818 Chenopodium quinoa HOM05D004340 ORTHO05D006363 1.9e-13 80.1 78 51.3
PGR102G3073 Punica granatum HOM05D004340 ORTHO05D006363 1.9e-13 80.1 77 50.6
Carub.0003s2628 Capsella rubella HOM05D004340 ORTHO05D006363 2.5e-13 79.7 74 50.0
arahy.Tifrunner.gnm1.ann1.AR8P07 Arachis hypogaea HOM05D004340 ORTHO05D006363 3.3e-13 79.3 73 47.9
TPR.G5981 Trifolium pratense HOM05D004340 ORTHO05D006363 3.3e-13 79.3 78 48.7
Ca_18821_v3 Cicer arietinum L. HOM05D004340 ORTHO05D006363 4.3e-13 79.0 77 46.8
Ca_29729_v3 Cicer arietinum L. HOM05D004340 ORTHO05D006363 4.3e-13 79.0 77 46.8
THA.LOC104801804 Tarenaya hassleriana HOM05D004340 ORTHO05D006363 9.6e-13 77.8 81 44.4
Atru.chr11.1746 Acer truncatum HOM05D004340 ORTHO05D006363 1.2e-12 77.4 78 47.4
AL3G42300 Arabidopsis lyrata HOM05D004340 ORTHO05D006363 1.2e-12 77.4 74 48.6
AT2G04660 Arabidopsis thaliana HOM05D004340 ORTHO05D006363 1.2e-12 77.4 74 48.6
Atru.chr10.1247 Acer truncatum HOM05D004340 ORTHO05D006363 1.6e-12 77.0 78 46.2
Sc11g0002100 Simmondsia chinensis HOM05D004340 ORTHO05D006363 1.6e-12 77.0 77 45.5
Sp7g01960 Schrenkiella parvula HOM05D004340 ORTHO05D006363 2.8e-12 76.3 74 45.9
Hund25218 Selenicereus undatus HOM05D004340 ORTHO05D006363 2.8e-12 76.3 78 46.2
Glyma.11G220500 Glycine max HOM05D004340 ORTHO05D006363 3.6e-12 75.9 77 45.5
Nn4g23232 Nelumbo nucifera HOM05D004340 ORTHO05D006363 4.7e-12 75.5 70 47.1
TPR.G26189 Trifolium pratense HOM05D004340 ORTHO05D006363 4.7e-12 75.5 79 45.6
Ah.03g134830 Amaranthus hybridus HOM05D004340 ORTHO05D006363 6.2e-12 75.1 71 49.3
EL10Ac6g13244 Beta vulgaris HOM05D004340 ORTHO05D006363 6.2e-12 75.1 71 49.3
CARHR261990 Cardamine hirsuta HOM05D004340 ORTHO05D006363 6.2e-12 75.1 74 48.6
TAR629G2604 Trochodendron aralioides HOM05D004340 ORTHO05D006363 6.2e-12 75.1 75 46.7
VMungo1383G3199 Vigna mungo HOM05D004340 ORTHO05D006363 1.1e-11 74.3 77 44.2
GSVIVG01019948001 Vitis vinifera HOM05D004340 ORTHO05D006363 1.8e-11 73.6 75 46.7
Nitab4.5_0004300g0030 Nicotiana tabacum HOM05D004340 ORTHO05D006363 3.1e-11 72.8 69 46.4
Aqoxy3G03456 Aquilegia oxysepala HOM05D004340 ORTHO05D006363 4.0e-11 72.4 77 48.1
Lj4g0013877 Lotus japonicus HOM05D004340 ORTHO05D006363 8.9e-11 71.2 67 47.8
MELO3C002960.2 Cucumis melo HOM05D004340 ORTHO05D006363 2.0e-10 70.1 77 39.0
Glyma.18G036900 Glycine max HOM05D004340 ORTHO05D006363 2.0e-10 70.1 77 41.6
TWI79G0307 Tripterygium wilfordii HOM05D004340 ORTHO05D006363 2.0e-10 70.1 77 46.8
Lj3A1035G45 Lonicera japonica HOM05D004340 ORTHO05D006363 2.6e-10 69.7 72 43.1
Thecc.02G342300 Theobroma cacao HOM05D004340 ORTHO05D006363 2.6e-10 69.7 70 47.1
BolC4t26245H Brassica oleracea HOM05D004340 ORTHO05D006363 4.4e-10 68.9 66 48.5
CSS0018825 Camellia sinensis var. sinensis HOM05D004340 ORTHO05D006363 5.8e-10 68.6 77 45.5
Nn1g04518 Nelumbo nucifera HOM05D004340 ORTHO05D014919 5.8e-10 68.6 69 44.9
BcaB05g21922 Brassica carinata HOM05D004340 ORTHO05D006363 7.6e-10 68.2 74 44.6
ClCG09G021920 Citrullus lanatus HOM05D004340 ORTHO05D006363 7.6e-10 68.2 77 39.0
FAN13G0065 Fragaria x ananassa HOM05D004340 ORTHO05D006363 7.6e-10 68.2 73 42.5
Lj1g0001827 Lotus japonicus HOM05D004340 ORTHO05D006363 7.6e-10 68.2 77 40.3
vmacro05308 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 7.6e-10 68.2 75 40.0
C04p46590 Brassica napus HOM05D004340 ORTHO05D006363 9.9e-10 67.8 66 48.5
CsaV3_5G025240 Cucumis sativus L. HOM05D004340 ORTHO05D006363 9.9e-10 67.8 77 37.7
BraA02t04684Z Brassica rapa HOM05D004340 ORTHO05D006363 1.3e-09 67.4 71 47.9
Phvul.001G233800 Phaseolus vulgaris HOM05D004340 ORTHO05D006363 1.3e-09 67.4 77 41.6
Sed0000698 Sechium edule HOM05D004340 ORTHO05D006363 1.3e-09 67.4 77 41.6
BcaC03g13079 Brassica carinata HOM05D004340 ORTHO05D006363 1.7e-09 67.0 71 47.9
Peaxi162Scf00222g00716 Petunia axillaris HOM05D004340 ORTHO05D006363 1.7e-09 67.0 69 44.9
Rhsim10G0051900 Rhododendron simsii HOM05D004340 ORTHO05D006363 2.2e-09 66.6 78 39.7
PGSC0003DMG400018437 Solanum tuberosum HOM05D004340 ORTHO05D006363 2.2e-09 66.6 75 40.0
BolC2t06011H Brassica oleracea HOM05D004340 ORTHO05D006363 3.8e-09 65.9 71 46.5
Cc11_g12720 Coffea canephora HOM05D004340 ORTHO05D006363 3.8e-09 65.9 75 40.0
FvH4_5g29350 Fragaria vesca HOM05D004340 ORTHO05D006363 3.8e-09 65.9 64 43.8
FAN18G2257 Fragaria x ananassa HOM05D004340 ORTHO05D006363 3.8e-09 65.9 64 43.8
A04p12890 Brassica napus HOM05D004340 ORTHO05D006363 4.9e-09 65.5 66 47.0
Sopen05g003610 Solanum pennellii HOM05D004340 ORTHO05D006363 4.9e-09 65.5 75 38.7
FAN04G3196 Fragaria x ananassa HOM05D004340 ORTHO05D006363 6.4e-09 65.1 64 43.8
Nitab4.5_0000040g0090 Nicotiana tabacum HOM05D004340 ORTHO05D006363 6.4e-09 65.1 64 45.3
Solyc05g007750.4 Solanum lycopersicum HOM05D004340 ORTHO05D006363 6.4e-09 65.1 75 38.7
Potri.008G089600 Populus trichocarpa HOM05D004340 ORTHO05D006363 1.1e-08 64.3 80 47.5
Rhsim10G0119600 Rhododendron simsii HOM05D004340 ORTHO05D006363 1.9e-08 63.5 71 39.4
CAN.G1335.16 Capsicum annuum HOM05D004340 ORTHO05D006363 2.4e-08 63.2 77 39.0
Oeu005760.1 Olea europaea HOM05D004340 ORTHO05D006363 3.2e-08 62.8 73 38.4
COL.COLO4_27998 Corchorus olitorius HOM05D004340 ORTHO05D006363 5.4e-08 62.0 64 45.3
Medtr7g021880 Medicago truncatula HOM05D004340 ORTHO05D006363 7.1e-08 61.6 93 37.6
Sabra08G0067000 Salix brachista HOM05D004340 ORTHO05D006363 7.1e-08 61.6 78 46.2
vmacro11375 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 7.1e-08 61.6 75 38.7
Eucgr.I00217 Eucalyptus grandis HOM05D004340 ORTHO05D006363 1.6e-07 60.5 57 45.6
PSO063G1986 Papaver somniferum HOM05D004340 ORTHO05D006363 2.1e-07 60.1 75 36.0
SalBow2G1648 Salvia bowleyana HOM05D004340 ORTHO05D006363 2.7e-07 59.7 73 34.2
PSO832G0091 Papaver somniferum HOM05D004340 ORTHO05D006363 6.0e-07 58.5 75 36.0
MSTRG.717 Avicennia marina HOM05D004340 ORTHO05D006363 1.0e-06 57.8 68 33.8
BraA04t16952Z Brassica rapa HOM05D004340 ORTHO05D006363 1.0e-06 57.8 68 42.6
BcaC07g37997 Brassica carinata HOM05D004340 ORTHO05D014919 1.7e-06 57.0 49 49.0
BolC8t48379H Brassica oleracea HOM05D004340 ORTHO05D014919 1.7e-06 57.0 49 49.0
MBI05_g36411_MAGBIO Magnolia biondii HOM05D004340 ORTHO05D014919 1.7e-06 57.0 95 33.7
vmacro05169 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 1.7e-06 57.0 75 37.3
SGA_v2.0_scaffold172G38951 Striga asiatica HOM05D004340 ORTHO05D006363 3.0e-06 56.2 70 35.7
Migut.L01267 Erythranthe guttata HOM05D004340 ORTHO05D006363 8.7e-06 54.7 74 33.8


User provided reference genes

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